Identifiers and Description

Gene Model Identifier

TTHERM_01129720

Standard Name

p28C (Light chain subunit of inner arm dynein (IAD) complex 2)

Aliases

PreTt30052 | 247.m00048 | 3817.m00192

Description

p28C 33 kDa inner dynein arm light chain axonemal protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• microtubule associated complex (ISS) | GO:0005875 | Ref:16933976
• axonemal dynein complex (ISS) | GO:0005858 | Ref:16933976
• inner dynein arm (ISS) | GO:0036156 | Ref:16933976

Molecular Function

• microtubule motor activity (ISS) | GO:0003777 | Ref:16933976

Biological Process

• microtubule-based movement (ISS) | GO:0007018 | Ref:16933976
• microtubule-based process (ISS) | GO:0007017 | Ref:16933976

Domains

No Data fetched for Domains

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 13%

TetraMine Data

TTHERM_01129720

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_20798.1	7.000837509083048e-159	hypothetical protein (256 aa)
Oxytricha	Contig21381.0.g78	6.998089991989877e-78	Axonemal dynein light chain
WormBase	WBGene00018307	2.0005131442217614e-40	locus:dyla-1 status:Partiall y_confirmed UniProt:Q95YA5 protein_id:CCD71054.1
Stentor Coeruleus	SteCoe_31218	3.975449735908647e-31

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_01129720(coding)
ATGATTCCAGCAAATAATAGCTTAGTTAAATATTCAACTCCAGTTTTGGTTTCTGTTGCA
GGAAAAAAAAAAGATATTAAAAAGAAGCCTTCTTAAACTGGGCCTTCTGGAGCTAATGCA
AATTAGTCTTAGATGATTAACTAGACTTAAATGTAAGAAAAGAAGGAAACACACAGAACA
GAAGATATATTATCATAGATTTTACCTCCAAAAGAATATACATTAGAAAATGGATAATTA
TGGATACAAACAGTTCTTTCAACACCTGCGACAAGAACTGAAGTTATTTAACTTTAAGAA
GATCTTGATCGCAAATTATAATAAAGATAAGCTAGAGAAACAGGTATATGCCCAATTAGA
GAAGAACTTTACGAATAATGCTTTGATGAATTAATTAGATAAATTACTATAGATTGCAGA
TAAAGAGGTTTATTGCTTGTTAGAGTAAGGGATGAATTCAAAAATTAATTAGAAGCTTAT
AAAACTTTGTACGAATCCTCAATCGCTTATGGCATGAGAAAAATGATTGATTCTGAATAA
AAAAAAACTGATATGAGAACTCAAATAATGTAATTAGAAAGGGAGTGTGAAGAACTTAGC
AAAGCTGTGGATGAGCTTGAAGAAAAGATATCTTTTACCAAAAAGAATGAAAATGAAAAA
TTAAACAATGAAAATGAAATACATAGAGTTGAAACAGAAAAAATCAAATAAAATAACACA
AAGCTAAAAGAAGAATTACAAGCTTTATTGGAAGGAAAGAAGTGA

>TTHERM_01129720(protein)
MIPANNSLVKYSTPVLVSVAGKKKDIKKKPSQTGPSGANANQSQMINQTQMQEKKETHRT
EDILSQILPPKEYTLENGQLWIQTVLSTPATRTEVIQLQEDLDRKLQQRQARETGICPIR
EELYEQCFDELIRQITIDCRQRGLLLVRVRDEFKNQLEAYKTLYESSIAYGMRKMIDSEQ
KKTDMRTQIMQLERECEELSKAVDELEEKISFTKKNENEKLNNENEIHRVETEKIKQNNT
KLKEELQALLEGKK

>TTHERM_01129720(gene)
ATGATTCCAGCAAATAATAGCTTAGTTAAATATTCAACTCCAGTTTTGGTTTCTGTTGCA
GGAAAAAAAAAAGATATTAAAAAGAAGCCTTCTTAAACTGGGCCTTCTGGAGCTAATGCA
AATTAGTCTTAGATGATTAACTAGACTTAAATGTAAGAAAAGAAGGAAACACACAGAACA
GAAGATATATTATCATAGATTTTACCTCCAAAAGAATATACATTAGAAAATGGATAATTA
TGGATACAAACAGTTCTTTCAACACCTGCGACAAGAACTGAAGTTATTTAACTTTAAGAA
GATCTTGATCGCAAATTATAATAAAGATAAGCTAGAGAAACAGGTTAATATTTAGCAATT
TAATATATAAATGTGCTCAACATAAAAAAATATATATTATTTAATATTAATGTAATCAAA
CCAACAACTTTTGGTTATAATAACAGGTATATGCCCAATTAGAGAAGAACTTTACGAATA
ATGCTTTGATGAATTAATTAGATAAATTACTATAGATTGCAGATAAAGAGGTTTATTGCT
TGTTAGAGTAAGGGATGAATTCAAAAATTAATTAGAAGCTTATAAAACTTTGTACGAATC
CTCAATCGCTTATGGCATGAGAAAAATGATTGATTCTGAATAAGTAATTAGCTTTTTAAA
ATAACTTTATGAGATTATTTATTTATTTATATAAAAATAAATAAACAAATCAACAAATTC
AAACATTTAAAACTATTAAAAAAGAAAAAAACTGATATGAGAACTCAAATAATGTAATTA
GAAAGGGAGTGTGAAGAACTTAGCAAAGCTGTGGATGAGCTTGAAGAAAAGATATCTTTT
ACCAAAAAGAATGAAAATGAAAAATTAAACAATGAAAATGAAATACATAGAGTTGAAACA
GAAAAAATCAAATAAAATAACACAAAGCTAAAAGAAGAATTACAAGCTTTATTGGAAGGA
AAGAAGTGA