Identifiers and Description

Gene Model Identifier

TTHERM_01129720

Standard Name

p28C (Light chain subunit of inner arm dynein (IAD) complex 2)

Aliases

PreTt30052 | 247.m00048 | 3817.m00192

Description

hypothetical protein

Genome Browser (Macronucleus)

GBrowse

Genome Browser (Micronucleus)

GBrowse

Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

No Data fetched for Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 13%

TetraMine Data

TTHERM_01129720

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_20798.17.000837509083048e-159hypothetical protein (256 aa)
OxytrichaContig21381.0.g786.998089991989877e-78Axonemal dynein light chain
WormBaseWBGene000183072.0005131442217614e-40locus:dyla-1 status:Partiall
y_confirmed UniProt:Q95YA5
protein_id:CCD71054.1
Stentor CoeruleusSteCoe_312183.975449735908647e-31

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_01129720(coding)
ATGATTCCAGCAAATAATAGCTTAGTTAAATATTCAACTCCAGTTTTGGTTTCTGTTGCA
GGAAAAAAAAAAGATATTAAAAAGAAGCCTTCTTAAACTGGGCCTTCTGGAGCTAATGCA
AATTAGTCTTAGATGATTAACTAGACTTAAATGTAAGAAAAGAAGGAAACACACAGAACA
GAAGATATATTATCATAGATTTTACCTCCAAAAGAATATACATTAGAAAATGGATAATTA
TGGATACAAACAGTTCTTTCAACACCTGCGACAAGAACTGAAGTTATTTAACTTTAAGAA
GATCTTGATCGCAAATTATAATAAAGATAAGCTAGAGAAACAGGTATATGCCCAATTAGA
GAAGAACTTTACGAATAATGCTTTGATGAATTAATTAGATAAATTACTATAGATTGCAGA
TAAAGAGGTTTATTGCTTGTTAGAGTAAGGGATGAATTCAAAAATTAATTAGAAGCTTAT
AAAACTTTGTACGAATCCTCAATCGCTTATGGCATGAGAAAAATGATTGATTCTGAATAA
AAAAAAACTGATATGAGAACTCAAATAATGTAATTAGAAAGGGAGTGTGAAGAACTTAGC
AAAGCTGTGGATGAGCTTGAAGAAAAGATATCTTTTACCAAAAAGAATGAAAATGAAAAA
TTAAACAATGAAAATGAAATACATAGAGTTGAAACAGAAAAAATCAAATAAAATAACACA
AAGCTAAAAGAAGAATTACAAGCTTTATTGGAAGGAAAGAAGTGA


>TTHERM_01129720(protein)
MIPANNSLVKYSTPVLVSVAGKKKDIKKKPSQTGPSGANANQSQMINQTQMQEKKETHRT
EDILSQILPPKEYTLENGQLWIQTVLSTPATRTEVIQLQEDLDRKLQQRQARETGICPIR
EELYEQCFDELIRQITIDCRQRGLLLVRVRDEFKNQLEAYKTLYESSIAYGMRKMIDSEQ
KKTDMRTQIMQLERECEELSKAVDELEEKISFTKKNENEKLNNENEIHRVETEKIKQNNT
KLKEELQALLEGKK


>TTHERM_01129720(gene)
ATGATTCCAGCAAATAATAGCTTAGTTAAATATTCAACTCCAGTTTTGGTTTCTGTTGCA
GGAAAAAAAAAAGATATTAAAAAGAAGCCTTCTTAAACTGGGCCTTCTGGAGCTAATGCA
AATTAGTCTTAGATGATTAACTAGACTTAAATGTAAGAAAAGAAGGAAACACACAGAACA
GAAGATATATTATCATAGATTTTACCTCCAAAAGAATATACATTAGAAAATGGATAATTA
TGGATACAAACAGTTCTTTCAACACCTGCGACAAGAACTGAAGTTATTTAACTTTAAGAA
GATCTTGATCGCAAATTATAATAAAGATAAGCTAGAGAAACAGGTTAATATTTAGCAATT
TAATATATAAATGTGCTCAACATAAAAAAATATATATTATTTAATATTAATGTAATCAAA
CCAACAACTTTTGGTTATAATAACAGGTATATGCCCAATTAGAGAAGAACTTTACGAATA
ATGCTTTGATGAATTAATTAGATAAATTACTATAGATTGCAGATAAAGAGGTTTATTGCT
TGTTAGAGTAAGGGATGAATTCAAAAATTAATTAGAAGCTTATAAAACTTTGTACGAATC
CTCAATCGCTTATGGCATGAGAAAAATGATTGATTCTGAATAAGTAATTAGCTTTTTAAA
ATAACTTTATGAGATTATTTATTTATTTATATAAAAATAAATAAACAAATCAACAAATTC
AAACATTTAAAACTATTAAAAAAGAAAAAAACTGATATGAGAACTCAAATAATGTAATTA
GAAAGGGAGTGTGAAGAACTTAGCAAAGCTGTGGATGAGCTTGAAGAAAAGATATCTTTT
ACCAAAAAGAATGAAAATGAAAAATTAAACAATGAAAATGAAATACATAGAGTTGAAACA
GAAAAAATCAAATAAAATAACACAAAGCTAAAAGAAGAATTACAAGCTTTATTGGAAGGA
AAGAAGTGA