Identifiers and Description

Gene Model Identifier

TTHERM_00319990

Standard Name

p28B

Aliases

PreTt15918 | 32.m00162

Description

Light chain subunit of inner arm dynein (IAD) complex 2

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

GBrowse

Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10%

TetraMine Data

TTHERM_00319990

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_10117.13.0013161285558437e-171hypothetical protein (241 aa)
OxytrichaContig10849.0.g142.998733531465523e-108Axonemal dynein light chain
Stentor CoeruleusSteCoe_233501.5007857627073948e-41
WormBaseWBGene000183079.9981864321491e-40locus:dyla-1 status:Partiall
y_confirmed UniProt:Q95YA5
protein_id:CCD71054.1

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00319990(coding)
ATGTCTCGTTATCCAAGAGAATCATTAGTTTAATATGAACCTGAAACAGCCATTCATAAG
AATAGCGATATTGCAAGAATTTCAAGTTTAGGTAATAAAAAAAAGCATTAACTTCCTCCT
CTTGAGTCTAAGCCTTCTACTGATGATATATTGAATGCTATTTTACCTCCTAGAGAATGG
GATCACGAAGGAACCCATTACATTTAATATGTTTCTCACAATCCTGCTTCAAGAGAAGAT
GTTGCTAATTTATAAAAGACTTTGGATGAAAAATTATTGGCTAGACAAGCAAGAGATTCT
GGTATTTGCCCTATAAGAGAAGAACTCCATAGTTAGTGTTTTGATGAAATTATTAGACAA
GTTACAATTGACTGCCCAGAAAGAGGTATATTATTGTTGAGAGTTAGAGATGAATTAAAA
ATGACTATTGCTGCATACCAAACTTTATATCAATCATCTGTTACATTTGGTATGAGAAAG
TAATTATAGTCTGAATAAGGTAAAGCTGACACAGAATTAAAAATATCTGAACTAGAAAAG
AAGAAAGCAAAATTAGAAGAAAGAAGAGTAGAACTGCTAAACAAGAAAGAAGCTATAGAG
AAAAGAAATAAAGAAAGAAGAGATATCGAAGAATAAAAGAGAAAGTAAGAAATTGAATTC
TTAAAATATCAAAGTTAACATTTAGAATAGTTCCTTAAATCTGTTACTCCTGATCTTAAA
TGA


>TTHERM_00319990(protein)
MSRYPRESLVQYEPETAIHKNSDIARISSLGNKKKHQLPPLESKPSTDDILNAILPPREW
DHEGTHYIQYVSHNPASREDVANLQKTLDEKLLARQARDSGICPIREELHSQCFDEIIRQ
VTIDCPERGILLLRVRDELKMTIAAYQTLYQSSVTFGMRKQLQSEQGKADTELKISELEK
KKAKLEERRVELLNKKEAIEKRNKERRDIEEQKRKQEIEFLKYQSQHLEQFLKSVTPDLK


>TTHERM_00319990(gene)
ATGTCTCGTTATCCAAGAGAATCATTAGTTTAATATGAACCTGAAACAGCCATTCATAAG
AATAGCGATATTGCAAGAATTTCAAGTTTAGGTAATAAAAAAAAGCATTAACTTCCTCCT
CTTGAGTCTAAGCCTTCTACTGATGATATATTGAATGCTATTTTACCTCCTAGAGAATGG
GATCACGAAGGAACCCATTACATTTAATATGTTTCTCACAATCCTGCTTCAAGAGAAGAT
GTTGCTAATTTATAAAAGACTTTGGATGAAAAATTATTGGCTAGACAAGCAAGGTAATAA
TTAATTAGTTTTAGCATATTTGTCTTTTAAATTATTTGAATGTTTAAAATAGCACATTTT
TTAATTTTTAATCATCAAAAAACTTTTAAATTCAAAAATTAGAGATTCTGGTATTTGCCC
TATAAGAGAAGAACTCCATAGTTAGTGTTTTGATGAAATTATTAGACAAGTTACAATTGA
CTGCCCAGAAAGAGGTAAATTGATATTGTTCTTAACAAATAACATAAAGCAGTTAATAAA
AAAATTAATACTACAATATGCAACTGTCTAAATTAGTAAATTTATAAGTGAATTCAGTTG
AAAGAAAGGTTTAATAAGTTTTTAATGAATAATTTAATCTAAAATTTGTTTCAAAGTATT
AATTTGGATGTCTTAAAATTTTAGTAGATATATTGAGTTATTTAATATTGAGAAATGCTA
GTTATTACAAATTATTATGATGATTTTTATTAAAGAAAATGAACTGCTTTAAATTAAACA
TCAAAAACCTATTAAAATTTAATTGATATATTAATAATAAATATAAATAATAAAAGGTAT
ATTATTGTTGAGAGTTAGAGATGAATTAAAAATGACTATTGCTGCATACCAAACTTTATA
TCAATCATCTGTTACATTTGGTATGAGAAAGTAATTATAGTCTGAATAAGGTAAAGCTGA
CACAGAATTAAAAATATCTGAACTAGAAAAGAAGAAAGCAAAATTAGAAGAAAGAGTAAT
TATTTAGTTTTTCAATCTTCGTTTTTAATCGGCTTTTTTTGATAATTTAAATTTAGAGAG
TAGAACTGCTAAACAAGAAAGAAGCTATAGAGAAAAGAAATAAAGAAAGAAGAGATATCG
AAGAATAAAAGAGAAAGTAAGAAATTGAATTCTTAAAATATCAAAGTTAACATTTAGAAT
AGTTCCTTAAATCTGTTACTCCTGATCTTAAATGA