Identifiers and Description

Gene Model Identifier

TTHERM_00841210

Standard Name

p28A

Aliases

PreTt16206 | 147.m00058 | 3741.m00004

Description

Light chain subunit of inner arm dynein (IAD) complex 2

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• microtubule associated complex (ISS) | GO:0005875 | Ref:16933976
• axonemal dynein complex (ISS) | GO:0005858 | Ref:16933976
• inner dynein arm (ISS) | GO:0036156 | Ref:16933976

Molecular Function

• microtubule motor activity (ISS) | GO:0003777 | Ref:16933976

Biological Process

• microtubule-based process (ISS) | GO:0007017 | Ref:16933976
• microtubule-based movement (ISS) | GO:0007018 | Ref:16933976

Domains

• ( PF02183 ) Homeobox associated leucine zipper
• ( PF04325 ) Protein of unknown function (DUF465)

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 20.3%

TetraMine Data

TTHERM_00841210

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_18960.1	7.996875492733741e-171	hypothetical protein (247 aa)
Oxytricha	Contig21381.0.g78	7.996458382256093e-94	Axonemal dynein light chain
WormBase	WBGene00018307	3.999458587140588e-43	locus:dyla-1 status:Partiall y_confirmed UniProt:Q95YA5 protein_id:CCD71054.1
Stentor Coeruleus	SteCoe_15463	8.194012623990515e-40

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00841210(coding)
ATGCAACCTCCACCAAATATCACAACTCCTAATTCACTTGTTAAGTACGCAAGTGCAGTA
CTTGTTTCTACAAGTGGTAAGCGTAACCTTCTTGATAAGCAAAAAGGCAAAGCACCCAAT
AGCATCACTAATGCCCAAACAGAAGATATCTTGAACAGTATTTTACCCCCTAGAGAATAC
ACTATGGATAAGCAATAGTTATGGATTTAAAGTGTTAGTGCTACTCCTGCAACTAGGGCT
GATGTTTTAGAATTATAAAGCAATCTTGATAAAAAATTATAATAAAGATAAGCAAGAGAG
ACAGGTATTTGCCCAATTAGAGAAGAACTTTATGCTTAATGCTTTGATGAATTAATTAGA
TAAATTACAATTAATTGTGCAGAAAGAGGTTTGTTGTTAGTTAGAGTTAGAGACGAAATC
AAGCATACAATTCAAGCCTACCAAACACTTTATGAAAGCTCTATAGCTTATGGAATGAGA
AAGGCATTGTAGGCTGAATAAAAGAAAGCAGAAATGGAAAGTAAAAAGAAATAGCTTGAA
GTAGAATGCAACGAATTATCAAAATAAGTTGAAACATTAGAAAAAAAGATAGAAGAAATA
GAGCAAAACGACTAAGAATAAAGAGAAAATGATGAAAAAATGCATGCTGAATAAGTTGAT
CATCTTAAAAAAACTAATCAAAGATTTAAAGAAGAGTTGGAAAAGTTACTTTCTGGCCCT
TAACCCCAAGCTAAAAAATGA

>TTHERM_00841210(protein)
MQPPPNITTPNSLVKYASAVLVSTSGKRNLLDKQKGKAPNSITNAQTEDILNSILPPREY
TMDKQQLWIQSVSATPATRADVLELQSNLDKKLQQRQARETGICPIREELYAQCFDELIR
QITINCAERGLLLVRVRDEIKHTIQAYQTLYESSIAYGMRKALQAEQKKAEMESKKKQLE
VECNELSKQVETLEKKIEEIEQNDQEQRENDEKMHAEQVDHLKKTNQRFKEELEKLLSGP
QPQAKK

>TTHERM_00841210(gene)
ATGCAACCTCCACCAAATATCACAACTCCTAATTCACTTGTTAAGTACGCAAGTGCAGTA
CTTGTTTCTACAAGTGGTAAGCGTAACCTTCTTGATAAGCAAAAAGGCAAAGCACCCAAT
AGCATCACTAATGCCCAAACAGAAGATATCTTGAACAGTATTTTACCCCCTAGAGAATAC
ACTATGGATAAGCAATAGTTATGGATTTAAAGTGTTAGTGCTACTCCTGCAACTAGGGCT
GATGTTTTAGAATTATAAAGCAATCTTGATAAAAAATTATAATAAAGATAAGCAAGAGAG
ACAGGTATTTGCCCAATTAGAGAAGAACTTTATGCTTAATGCTTTGATGAATTAATTAGA
TAAATTACAATTAATTGTGCAGAAAGAGGTTTGTTGTTAGTTAGAGTTAGAGACGAAATC
AAGCATACAATTCAAGTAAAAAATTTTCAAATTTAAGCAAATTTTAGTCAAGAATTAATA
GGCAATTTTATTTAGAAATAGTATTTAATAAATAAAATAATTTCAAAGTGTTAATTGTAA
ATAATCAATAAAAATTGCTTATTTTTTTGGTTTAAACAATTTAAAATTTAATTTGAAAAA
ATAATAAAATCAGGCCTACCAAACACTTTATGAAAGCTCTATAGCTTATGGAATGAGAAA
GGCATTGTAGGCTGAATAAAAGAAAGCAGAAATGGAAAGTAAAAAGAAATAGCTTGAAGT
AGAATGCAACGAATTATCAAAATAAGTTGAAACATTAGAAAAAAAGATAGAAGAAATAGA
GCAAAACGACTAAGAATAAAGAGAAAATGATGAAAAAATGCATGCTGAATAAGTTGATCA
TCTTAAAAAAACTAATCAAAGATTTAAAGAAGAGTTGGAAAAGTTACTTTCTGGCCCTTA
ACCCCAAGCTAAAAAATGA