Identifiers and Description
Gene Model Identifier
TTHERM_00294660Standard Name
XLF1 (XRCC4-like factor)Aliases
PreTt15576 | 27.m00236 | 3692.m00039Description
hypothetical protein; XLF family protein; assists in annealing broken ends of DNA in the non-homologous end joining (NHEJ) pathwayGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- micronucleus (IDA) | GO:0031040 | Ref:SUPR000145
Biological Process
- double-strand break repair via single-strand annealing (IDA) | GO:0045002 | Ref:SUPR000145
Domains
- ( TIGR00537 ) methylase, putative
- ( PF09302 ) XLF (XRCC4-like factor)
- ( PF08241 ) methyltransferase domain
- ( PF05175 ) methyltransferase small domain
- ( TIGR00536 ) methyltransferase, HemK family
- ( TIGR03387 ) protein-(glutamine-N5) methyltransferase, release factor-specific
- ( TIGR03386 ) protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 14.1%
TetraMine Data
TTHERM_00294660
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_08721.1 2.0009778678102968e-172 hypothetical protein (581 aa)
Oxytricha Contig19116.0.1.g101 0.00000000000059990805086298 hypothetical protein
DictyBase DDB_G0284785 0.000009999254677478949 nhej1 on chromosome: 4 positio
n 2481017 to 2482785
General Information
No Data fetched for General Information
Associated Literature
Sequences
>TTHERM_00294660(coding)
ATGTACGCTTAAACACTCTCTGAAGCTTTAACTTTGAATGAAATTATTTTTTTAAAAAAG
TAAATTTGGTGGACTGGCTGTACTGAAACACCATTTATATGTCGTGGAGGAGTTTATAAT
AAAAATAGCTATCTTTTAGTGATCACAGATACACGTAATGTATGGGTAACAAAGGCAGAT
GATTAACAGATTATAGATGAGAAAGATAAATTTAACTAATCAATAAAGATAAAATTTGAA
GATATTTTGAATACTCTTGATACTCCACTCAGATTTGGTAGAAGCAATACTTAATTTACA
AAGCTATAATTCAGAAAAAATAGAGAAGAAGATCTAATTTTCTTAATGGAATTTTAAGTA
GGAATTTATCCTTTCAAATGGGAGTTCTTTTTAACAAAGATGGATGATAGCGAAATTTTT
AATATTTTAGCTGATGATTTATTAAATCCTATGGCTAAAACAATAATGTCTCTTGAAAAA
AGAGGAAACTTGTATAAATAAAAATGTATTCAAATAGAAAAAGAGTTGTTAAGACGCTTA
AGCGAAAAGGAGAGAAATACATATCTTTCCTCCATTGATAAAGATAATGAGGAAGTTTGG
TCAAATTTCTTAATAGTAGATTCTTAAGATGATAAACTGACAAATTTTGACTTTGGTCCA
GCCGCTTAATTCTTTCTGTCAAATCACAACTCCAAAAATTTAATTTAAGATTAAGAAAAT
AAAAAAATTACAGCCAATTAGTAAAATGATATAATGGACAACAACGAAGACTTAAAAAGA
ATGAAATTAATTTAAGATTATTTTAGCACCTTTGAAGAATAGCCTTTGCCAAATGCTTAT
TTAAGACCAGATTCTAAAAAGAAATTTAAATAATAAGAAGAAAACAACTAATTAAAATAC
AAATAATAATAGCTAGGAATCAAAGTCAATTATGAAGAATAAAATGAAAATAAAATTGCT
AATGAGTAAGTATAAATATAAATTTAACAGAATGTTCAAAAAGAAGAAAAGAAAAAGAAA
AAGCGTTTAGATTTCTTATGA>TTHERM_00294660(protein)
MYAQTLSEALTLNEIIFLKKQIWWTGCTETPFICRGGVYNKNSYLLVITDTRNVWVTKAD
DQQIIDEKDKFNQSIKIKFEDILNTLDTPLRFGRSNTQFTKLQFRKNREEDLIFLMEFQV
GIYPFKWEFFLTKMDDSEIFNILADDLLNPMAKTIMSLEKRGNLYKQKCIQIEKELLRRL
SEKERNTYLSSIDKDNEEVWSNFLIVDSQDDKLTNFDFGPAAQFFLSNHNSKNLIQDQEN
KKITANQQNDIMDNNEDLKRMKLIQDYFSTFEEQPLPNAYLRPDSKKKFKQQEENNQLKY
KQQQLGIKVNYEEQNENKIANEQVQIQIQQNVQKEEKKKKKRLDFL>TTHERM_00294660(gene)
ATGTACGCTTAAACACTCTCTGAAGCTTTAACTTTGAATGAAATTATTTTTTTAAAAAGT
AAATATGGTCTAATTTAGCAAAATTTGCTATCGTTTATATATAATTAATTTAAAAATTAG
AGTAAATTTGGTGGACTGGCTGTACTGAAACACCATTTATATGTCGTGGAGGAGTTTATA
ATAAAAATAGCTATCTTTTAGGTAAATTGGTTTGATGATATATGCATTATTTATTCATAA
AAGAAAGCTAAGTTGTAGCTATTTTAAATTAACATAATAGTGATCACAGATACACGTAAT
GTATGGGTAACAAAGGCAGATGATTAACAGATTATAGATGAGAAAGATAAATTTAACTAA
TCAATAAAGATAAAATTTGAAGATATTTTGAATACTCTTGATACTCCACTCAGATTTGGT
AGAAGCAATACTTAATTTACAAAGCTATAATTCAGAAAAAATAGAGAAGAAGATCTAATT
TTCTTAATGGAATTTTAAGTAGGAATTTATCCTTTCAAATGGGAGTTCTTTTTAACAAAG
ATGGATGATAGCGAAATTTTTAATATTTTAGCTGATGATTTATTAAATCCTATGGCTAAA
ACAATAATGTCTCTTGAAAAAAGAGGAAACTTGTATAAATAAAAATGTATTCAAATAGAA
AAAGAGTTGTTAAGACGCTTAAGCGAAAAGGAGAGAAATACATATCTTTCCTCCATTGAT
AAAGATAATGAGGAAGTTTGGTCAAATTTCTTAATAGTAGATGTAAATGAAAAAAATAAA
TTACTATTTATCATACAAACTCTATTTGTTGGGTTGGTCAAAAATTTGACCTTTATCTTA
TACCCTCCCTTATTTAATCAACATAATTAATTAATCCTAACCTATTGTTTAAAAAGATAT
TTTTAATTTAAAGTCTTAAGATGATAAACTGACAAATTTTGACTTTGGTCCAGCCGCTTA
ATTCTTTCTGTCAAATCACAACTCCAAAAATTTAAGTAGTCATTTTCAGTAAAAAAGCTA
ATAACTTACTTATTTTTTAATATTAATATTAGTTTAAGATTAAGAAAATAAAAAAATTAC
AGCCAATTAGTAAAATGATATAATGGACAACAACGAAGACTTAAAAAGAATGAAATTAAT
TTAAGATTATTTTAGCACCTTTGAAGAATAGCCTTTGCCAAATGCTTATTTAAGACCAGA
TTCTAAAAAGAAATTTAAATAATAAGAAGAAAACAACTAATTAAAATACAAATAATAATA
GCTAGGTATATTACTTACAACTAGGCTTTTTAATTTTTAAATTAAAATATAACTAAAGGA
ATCAAAGTCAATTATGAAGAATAAAATGAAAATAAAATTGCTAATGAGTAAGTATAAATA
TAAATTTAACAGAATGTTCAAAAAGAAGAAAAGAAAAAGAAAAAGCGTTTAGATTTCTTA
TGA