Identifiers and Description
Gene Model Identifier
TTHERM_00036960Standard Name
VPS41 (Vacuolar Protein Sorting 4-1)Aliases
PreTt14431 | 2.m02094 | 3825.m02804Description
vacuolar protein sorting-associated protein 4b; VPS4-like ATPase- AAA family protein; associated with vesicle formation and programmed nuclear death; localizes to cytoplasm and oral apparatus during growth and to parental macronucleus during conjugationGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- macronucleus (IDA) | GO:0031039 | Ref:SUPR000323
- cytoplasm (IDA) | GO:0005737 | Ref:SUPR000323
- oral apparatus (IDA) | GO:0031912 | Ref:SUPR000323
Domains
No Data fetched for Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.2%
TetraMine Data
TTHERM_00036960
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_00957.1 9.997093137033517e-262 ATPase, AAA family protein (44
4 aa)
Oxytricha Contig13722.0.g102 3.0011260078469234e-135 ATPase family associated with
various cellular activities (A
AA)
SGD YPR173C 9.001601097193671e-134 VPS4 AAA-ATPase involved in mu
ltivesicular body (MVB) protei
n sorting, ATP-bound Vps4p loc
alizes to endosomes and cataly
zes ESCRT-III disassembly and
membrane release; ATPase activ
ity is activated by Vta1p; reg
ulates cellular sterol metabol
ism
WormBase WBGene00021334 1.9999788875029746e-125 locus:vps-4 status:Confirmed
UniProt:Q9BL83 protein_id
:CCD68056.1
DictyBase DDB_G0284347 9.996261361959507e-120 vps4 on chromosome: 4 position
1865073 to 1866634
Stentor Coeruleus SteCoe_25506 1.733141042341547e-58
General Information
No Data fetched for General Information
Associated Literature
Sequences
>TTHERM_00036960(coding)
ATGTTTTACGGAGGTAATAACGCTCCCTCATTTAAGTTAGATAATACTTAAATTCGTAAT
GAAACATAGTACCTGATTGAGAAAGGTAGAAGATCTTTCAATGAAGGTGATACAATTGAA
GAAAAGGATAAGGGTATTTCAACCTTTTTACAAGGTTTAAAGAAGTTAGAACTATGGATA
TAAAGAGAAACTGATACTTTAATTCTAAATACTTTAAAAACCTAATACCAAAATAACTAT
AAAGAAGTAGAAACTATGCTTACAAAATTAGAATAAATTAAAAAAAATGGAAACTAGCCT
ATGGCAATAGCATAAGGCGGCGGCGGTGGTAACAACAATAGTAACAAAGATGAAAACACT
AAATTTAAGGAAGCTTTGTAAGAAACAATTGTGCCCGAAAAACCTAACATAAAATGGGAT
GATATTGCTGGTTTAGTGAAGGCTAAGGAATCCTTAAAAGAAGCAGTCATTCTTCCAATT
AGATTCCCTGAAATATTTAAAGGTGCTCGTAAGCCATGGAAAGGTATCCTTCTTTATGGA
CCTCCAGGTACTGGTAAAACTTATTTAGCTAAAGCTTGTGCTACAGAAACTGAAGGTACT
TTCTTTTCAGTATCCTCTGCAGATCTTGTCAGCAAATATGTTGGTGAATCAGAAAAATTA
ATTAAGAACTTATTTGCTTTAGCTAGAGAGAAAAAGCCTTCTATTATATTTATTGATGAA
GTAGACAGTTTATGTGGTAATAGAAGTGACGGAGAAAATGATGCTTCAAGAAGAGTAAAA
ACAGAGTTTTTGGTTTAGATGCAAGGTGTTGGTAATGATGATTAAGGTGTTTTGGTACTT
GGAGCAACCAATTTACCATGGGCTCTCGATCCTGCTATTAGAAGAAGATTTGAAAAAAGA
ATCTACATCCCCTTGCCTGACTAACCCGCCAGAAAATTCTTGCTCAAACATAACCTTAAA
AATACTCCAAACACTCTTAAAGAAGAAGATTTTGAAAGATTATCCTAATTAACAGACGGA
TTCTCAGGAGCTGATATGTCTATATTTGTAAGAGATGCAGTACTAGAACCAGTTAGAAGA
TTATAGATTGCAACTAAATTCAAAAAGTTACCAGGAGACAAATACATGCCTGTAGAAGAT
AATGCTTCAGGTCCTGATATTGTTAACCTTAACTATTTAAGCTTAAATCAGTAATAGCTT
GAGCTTCCATAAATATCTGCACAAGATTTTGAAATCGCCATTAAAAAAGCCAAAGGTACT
GTTGGAAAAGATTAGCTCAAAGATTATGAAAAGTGGACTACTGAATTTGGTCAAGATGGT
TGA>TTHERM_00036960(protein)
MFYGGNNAPSFKLDNTQIRNETQYLIEKGRRSFNEGDTIEEKDKGISTFLQGLKKLELWI
QRETDTLILNTLKTQYQNNYKEVETMLTKLEQIKKNGNQPMAIAQGGGGGNNNSNKDENT
KFKEALQETIVPEKPNIKWDDIAGLVKAKESLKEAVILPIRFPEIFKGARKPWKGILLYG
PPGTGKTYLAKACATETEGTFFSVSSADLVSKYVGESEKLIKNLFALAREKKPSIIFIDE
VDSLCGNRSDGENDASRRVKTEFLVQMQGVGNDDQGVLVLGATNLPWALDPAIRRRFEKR
IYIPLPDQPARKFLLKHNLKNTPNTLKEEDFERLSQLTDGFSGADMSIFVRDAVLEPVRR
LQIATKFKKLPGDKYMPVEDNASGPDIVNLNYLSLNQQQLELPQISAQDFEIAIKKAKGT
VGKDQLKDYEKWTTEFGQDG>TTHERM_00036960(gene)
ATGTTTTACGGAGGTAATAACGCTCCCTCATTTAAGTTAGATAATACTTAAATTCGTAAT
GAAACATAGTACCTGATTGAGAAAGGTAGAAGATCTTTCAATGAAGGTGATACAATTGAA
GAAAAGGATAAGGGTATTTCAACCTTTTTACAAGGTTTAAAGAAGTTAGAACTATGGATA
TAAAGTAATTTATTTAGATTTACAAATTCGAATCGTTTAAGCTTAAAAAAATAACGCGAA
TCAATTGAAAAATTAACCATTTTTTATTATAATTAACAGGAGAAACTGATACTTTAATTC
TAAATACTTTAAAAACCTAATACCAAAATAACTATAAAGAAGTAGAAACTATGCTTACAA
AATTAGAATAAATTAAAAAAAATGGAAACTAGCCTATGGCAATAGCATAAGGCGGCGGCG
GTGGTAACAAGTAAAATATATTGCAAAATTAGCTAAGTTTAAATATAAAATTTGGTTTTA
AAATAAAATGAAAGCTTATTCTTTAAATTATTTATAGTGGCATTAATTCTTTCATGTATT
ATCACTTAGATTAATTTTATTTTATCTTAAATAGCAATAGTAACAAAGATGAAAACACTA
AATTTAAGGAAGCTTTGTAAGAAACAATTGTGCCCGAAAAACCTAACATAAAATGGGATG
ATATTGCTGGTTTAGTGAAGGCTAAGGAATCCTTAAAAGAAGCAGTCATTCTTCCAATTA
GATTCCCTGAAATATTTAAAGGTGCTCGTAAGCCATGGAAAGGTATCCTTCTTTATGGAC
CTCCAGGTACTGGTAAAACTTATTTAGCTAAAGCTTGTGCTACAGAAACTGAAGGTACTT
TCTTTTCAGTATCCTCTGCAGATCTTGTCAGCAAATATGTTGGTGAATCAGAAAAGTAAT
TTAATTTAATTTAATTTACATTCATTTTCTTTCAGCAAAAAAAACATTATCAATATTTGA
TTAATTAGTGTCTTTAATTATTAAGACAAAATCAACTCTTTAAAAATTTATTAGAATTTC
ATGCTTCACTTTCAAAATATCTTTTGATTGTAATATAAATCAGTCAAAATGAATGAAAAA
ATTCATTCATTCATTCATTCTTTATTTATTATTTTTCTAAAATTTGAAAGTTCATTATTT
GCATGAAAACAAATAAGTTATTATAGATAAAATTAATTTGGTTTATTTCACAATATTTCT
GATCGCATCAATAGGAAATATTGATCAGCATTTGAATATTTATTTATTTAATAAATATCT
CATTTTTCTTTTAAGATTAGAAAATATTTTTACAGTCTATCAAGAAATATAAAAATTTTT
TGAATGCATTTTCATAGGATAAATATATTTTTAAAATAAAAAATAATAGATTAATTAAGA
ACTTATTTGCTTTAGCTAGAGAGAAAAAGCCTTCTATTATATTTATTGATGAAGTAGACA
GTTTATGTGGTAATAGAAGTGACGGAGAAAATGATGCTTCAAGAAGAGTAAAAACAGAGT
TTTTGGTTTAGATGCAAGGTGTTGGTAATGATGATTAAGGTGTTTTGGTACTTGGAGCAA
CCAATTTACCATGGGCTCTCGATCCTGCTATTAGAAGAAGATTTGAAAAAAGAATCTACA
TCCCCTTGCCTGACTAACCCGCCAGAAAATTCTTGCTCAAACATAACCTTAAAAATACTC
CAAACACTCTTAAAGAAGAAGATTTTGAAAGATTATCCTAATTAACAGACGGGTAAAATG
ATTATAAAAGAAATATACAGAATTTTAACATGTTAATTAAAAACAATATATAGATTCTCA
GGAGCTGATATGTCTATATTTGTAAGAGATGCAGTACTAGAACCAGTTAGAAGATTATAG
ATTGCAACTAAATTCAAAAAGTTACCAGGAGACAAATACATGCCTGTAGAAGATAATGCT
TCAGGTCCTGATATTGTTAACCTTAACTATTTAAGCTTAAATCAGTAATAGCTTGAGCTT
CCATAAATATCTGCAGTAAAATTTTTTATTTTTTTATTTTATATTTTTAATAAATAAATT
CTATTTAATAATAAAGCAAGATTTTGAAATCGCCATTAAAAAAGCCAAAGGTACTGTTGG
AAAAGATTAGCTCAAAGATTATGAAAAGTGGACTACTGAATTTGGTCAAGATGGTTGA