Identifiers and Description

Gene Model Identifier

TTHERM_00355130

Standard Name

UFD1 (ubiquitin fusion degradation 1)

Aliases

PreTt27499 | 37.m00216 | 3836.m02303

Description

ubiquitin fusion degradation UFD1 family protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( TIGR00165 ) ribosomal protein S18
• ( PF03152 ) Ubiquitin fusion degradation protein UFD1

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10%

TetraMine Data

TTHERM_00355130

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_02314.1	9.997093137033517e-262	ubiquitin fusion degradation p rotein UFD1 containing protein (305 aa)
Oxytricha	Contig726.1.g116	1.9992362000979228e-56	Ubiquitin fusion degradation p rotein UFD1
DictyBase	DDB_G0271122	4.001501063932074e-49	ufd1 on chromosome: 2 position 33552 to 34772
SGD	YGR048W	1.9991939848149086e-44	UFD1 Protein that interacts wi th Cdc48p and Npl4p, involved in recognition of polyubiquiti nated proteins and their prese ntation to the 26S proteasome for degradation; involved in t ransporting proteins from the ER to the cytosol
WormBase	WBGene00006733	1.9993430003514377e-39	locus:ufd-1 Ubiquitin fusion degradation protein 1 homolog status:Confirmed UniProt: Q19584 protein_id:CAA93460.1
Stentor Coeruleus	SteCoe_17004	1.185064864233981e-27

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00355130(coding)
ATGGACTTCATCAATTAATTAATTGGCGGCCGCGGTGGCGGTGGTAATTATAATCAATAA
TACTACGCCTATAATAATAGAAAGCCTTAGTATTCAGATCATTTGGAAGTTTATCCAGCT
TATATGCTAGAAAGACATGATTTAGAAAAGGGAAATAAGATTTTGTTGCCACCTTCTGTT
TTAAATACTCTTTCAGCATCTAACTTACCCTATCCTATGATTTTTTGTGTATAAAATACC
TATTTAAATAAGCAGACATATGTAGGTGTGTTGGAATTTATAGCTCCTGAAGGTACTTGC
TACATTCCATTTTGGATGTTTTAGATGTTATAATGCTTTGATGGGTAATAAATTTAGGTA
ACTCTTGTCACTGATGTAAAAAAAGGAAAATTCGTAAAAATTTAGCCACACGAAACTGCC
TTTATAGATTTACCTGATCCTAGAGCTATCCTTGAAAAAGAATTAAGAAACTATACAGTT
TTGCATTAAGGAGATACAATTCACATAGAATTTATGAAATAGCATTTTTAGATTGATATT
TTAGAAGTAAAACCTGCTAATGATTATAATGCAATTTGTGTCGTTGATGCAGAAATCGAA
GTAGATTTCGCTAAGCCTTTGGATTATGTAGAGCATCCCTTGCCAACTATGACCAAAAAG
GAATCAAGTGTTGTCATGGGTGAAGAAAATTAGCCTAAATAGGAGAAAAATCCTTTCAGT
GGAAAGGCTACTAGAATAGATGGTAAAGCTATTGATTAAAAGAAGTTAAAAATGAAAGAA
GAAGTAAAGGAAGATTACGATCCTAGAAAGCATAGACTACCTAACGGTGTTAGAAGAAAA
ATACTTAATAACGAATTCGTTGGTAAATCAACTGTTATTGGAAAGTCTATGTCTACTATG
AATAAAAAAAAATGA

>TTHERM_00355130(protein)
MDFINQLIGGRGGGGNYNQQYYAYNNRKPQYSDHLEVYPAYMLERHDLEKGNKILLPPSV
LNTLSASNLPYPMIFCVQNTYLNKQTYVGVLEFIAPEGTCYIPFWMFQMLQCFDGQQIQV
TLVTDVKKGKFVKIQPHETAFIDLPDPRAILEKELRNYTVLHQGDTIHIEFMKQHFQIDI
LEVKPANDYNAICVVDAEIEVDFAKPLDYVEHPLPTMTKKESSVVMGEENQPKQEKNPFS
GKATRIDGKAIDQKKLKMKEEVKEDYDPRKHRLPNGVRRKILNNEFVGKSTVIGKSMSTM
NKKK

>TTHERM_00355130(gene)
ATGGACTTCATCAATTAATTAATTGGCGGCCGCGGTGGCGGTGGTAATTATAATCAATAA
TACTACGCCTATAATAATAGAAAGCCTTAGTATTCAGATCATTTGGAAGTTTATCCAGCT
TATATGCTAGAAAGACATGATTTAGAAAAGGGAAATAAGATTTTGTTGCCACCTTCTGTT
TTAAATACTCTTTCAGCATCTAACTTACCCTATCCTATGATTTTTTGTGTATAAAATACC
TATTTAAATAAGCAGACATATGTAGGTGTGTTGGAATTTATAGCTCCTGAAGGTACTTGC
TACATTCCATTTTGGATGTTTTAGATGTTATAATGCTTTGATGGGTAATAAATTTAGGTA
ACTCTTGTCACTGATGTAAAAAAAGGAAAATTCGTAAAAATTTAGCCACACGAAACTGCC
TTTATAGATTTACCTGATCCTAGAGCTATCCTTGAAAAAGAATTAAGAAACTATACAGTT
TTGCATTAAGGAGATACAATTCACATAGAATTTATGAAATAGCATTTTTAGATTGATATT
TTAGAAGTAAAACCTGCTAATGATTATAATGCAATTTGTGTCGTTGATGCAGAAATCGAA
GTAGATTTCGCTAAGCCTTTGGTATTTATTTGAATTTCTTATTAAATAATGTGCTTTTAG
ATTTTTAAACAAATGCATAAAAGCAATAATAGAAAAAAAGAAAGTTAATTTTAAATAAAT
TTTTTTATTTTTAATAAAGGATTATGTAGAGCATCCCTTGCCAACTATGACCAAAAAGGA
ATCAAGTGTTGTCATGGGTGAAGAAAATTAGCCTAAATAGGAGAAAAATCCTTTCAGTGG
AAAGGCTACTAGAATAGATGGTAAAGCTATTGATTAAAAGAAGTTAAAAATGAAAGAAGA
AGTAAAGGAAGATTACGATCCTAGAAAGCATAGACTACCTAACGGTGTTAGAAGAAAAAT
ACTTAATAACGAATTCGTTGGTAAATCAACTGTTATTGGAAAGTCTATGTCTACTATGAA
TAAAAAAAAATGA