Identifiers and Description

Gene Model Identifier

TTHERM_000503900

Standard Name

TWI6 (Tetrahymena piWI 6)

Aliases

None

Description

piwi-like Twi9p protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

No Data fetched for Domains

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 13.9%

TetraMine Data

TTHERM_000503900

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_14909.1	9.997093137033517e-262	piwi domain-containing protein (808 aa)
Oxytricha	Contig16116.0.g20	3.9991157591502974e-89	Piwi domain
DictyBase	DDB_G0276299	5.000518477595783e-71	agnA on chromosome: 2 position 6579134 to 6582276
WormBase	WBGene00004178	2.9987670792171964e-67	locus:prg-1 status:Confirmed UniProt:P90786 protein_id :CAA98113.1
Stentor Coeruleus	SteCoe_5014	1.1089390193121365e-40

General Information

No Data fetched for General Information

Associated Literature

1. Ref:19656801: Couvillion MT, Lee SR, Hogstad B, Malone CD, Tonkin LA, Sachidanandam R, Hannon GJ, Collins K (2009) Sequence, biogenesis, and function of diverse small RNA classes bound to the Piwi family proteins of Tetrahymena thermophila. Genes & development 23(17):2016-32

Sequences

>TTHERM_000503900(coding)
ATGCTTTAATAGTTACCAAAAAGACCACCTAAATCTTCAGCTCAAGAGATCAGCAAAATA
TGCAGAAACATTAAGCTTCTTACAAATATGTTTACTATGTAAGTAGAAGCCCCCTAGTCT
TCTGATTCTGATGGACCTCAAGGTTGTGTCTACAAACTTCTTTGTTATCAATATGATGTT
GAATTCTCTCCTAATATTGCTGAGGACAACAGATCCCTAAGATACAAAATCTTTAAAGAA
GCTCGCAGAGATATTGAGACAATCATAGGAAAATTCTCTTTTTCAGGAAAATCTCTATTC
TCAATGAAAAATCTTAGCATAGTTAAGCTTAACAAAATAAAGAATATTGATGCGATCAAT
GTTGATGGACAAAAATACTCTATCCTTTTGAGGTTCACAAAAAGCTTTGAAGTGAATGAT
GAGTCTGCTTAAAATAAAGACAAGACGTCTGTAAACTTCAAAAAAGGCAATCAAGTCACT
TAGTTGCTCAATATCATCTTAAAATCTATCATGCGTGATGAGAAATTTTAGGAAATTGGA
AAGAATTCTAAGTTCTATGATGTTAACTCTAAGAGTGATATTATAATCAAAAGTAGAGAT
GGATCTACTAGTGCCCTCGAAGCCTACAAAGGATTCACTTTCAATGTCACTCCAACCTAA
GACAGACTTTACTTAATGGTTGATTACTGCAGTAGAATTATCAGAAAAGAAACTGCATTA
GAATACTTAAAGAATAACAACAATTAATTGTCTGGTCTTTCAGTAATTACCAAATACAAT
AATTATCAAACTTACTTAATCGACAGAGTAGATGACAGAAAAACTCCTAGTTCTACTTTC
CTTAACTAAAAAACTAAAACCTAAATTAGTTTCGCATAATACTACAAGGAGCGTTATAAT
ATCTAAATCAGAGATATGAGACAGCCCTTACTTGTTCATAAAAGAAAATACAGAGAGCCT
AATACTAACATCTAAAAGGTTGAAGAAGTTTATTTAATTCCTGAATTATGCAATATGACA
GGAATGACAGACGAATAACGTGAGAATTTCTAAGCAATGAAGGAAGTTGCTACTCATACT
AAACTTACCCCATAAGAAAGATATCAAAATTCTGTTAATAATTGTAAATTTTTAAGTAAC
AAAACAAGTTCTAGTGGAATTAAAATTGATGAAAGAAGCAATTTGATAGATGCTGTTTAA
TTAAGAGCTCCTAAAGTCACTTTAGGTGGTAATAAGACTGCTAATACCGAAAGAGGTAAT
TTTGACATGAGAGCTCCAACCTTAGATAAAATTGAGTTTAAAGATTGGTCTCTTATATGT
AACAAAAAAGATGACTAAAGTGCAGATAATTTTATAGACACTCTTAAGAAGGCTTCCTAG
ACATTTGGAATTACTGTCAACGATCCTTGCTTTTTGGCCTAGAGAGACTGGAATGCTAAT
AACTGGATTAGATCTCTCGATGAAGACTTTTCCAATAATGGTTTACCTCAATTTGTTTTG
AGTTTCGGTCAAGCCAATAGTGGTTTATACTCTGGTTTAAAGAGATTTTTAACTTCAGAA
GTAGGTATAGAATCCTAGCATGTTAATCCAAGATCCCTCCAAAAGAACGGAATGAGTGTT
GCTTCAAAAATTGCTCTACAAATTGCCTCTAAACTAGGTAGAAGAATCTGGTAAGTTGAA
ACCCCAACTGGAATTGATAAAAACACCATGATTATCGGTATAGAGACCAGTATGAAGAAG
ATCAATAGATAATAGGTGATTGGCGTTGTTGCTTCCATCGACAAAGACTTTACCAAATAC
TTTTCTGATGTTGAAATTAGGAAAGAAAATGATACTACTTTCCCTACTCTCTCTAAGATT
GTTACCAAAGCCATATAGGCTTATGTTAAAAATACCAAAGTTGTTCCTGCTGAAGTGATT
ATTTACAGATAAGGACTTGGTGAAGGTCAAATTCAATAGAGTTTTAATCTTGAAATTAAA
GCCATTTAGAATGGTTTTAGCAACTTTAAGAAAGATTACAATCCACGCTTAGCCTTTTTC
TAGGTTAACAGAAAAATTGGCCAAAAGTTCTATCAATAGCCTTAAGGTGACAAATCAGAA
GTTTCAAATCCTGCTTCAGGTACTATTGTAGCCTCTTAAGTTGTTTAGAACAACTTTGAA
TTCTTCATGGCTGCATAAAACTGCAATTCTGGTGTTTGTACACCCACTAAGTACACTTGT
TTGTATAACAACACCAACTTAAAAGAGGATCAAATCTGGTAATTAACTTACTATCAAACA
TTCAACTATTATAACTGGCAAGGACCTGTAAGAGTACCTGCTGCTATGAAGTACGCAGAA
AAACTTGCTAAGTTTGTTAGTGACACTATCCAAGAATCTGCCAATGAAAACTTGGCTAAC
AGTCTTTTCTATTTGTGA

>TTHERM_000503900(protein)
MLQQLPKRPPKSSAQEISKICRNIKLLTNMFTMQVEAPQSSDSDGPQGCVYKLLCYQYDV
EFSPNIAEDNRSLRYKIFKEARRDIETIIGKFSFSGKSLFSMKNLSIVKLNKIKNIDAIN
VDGQKYSILLRFTKSFEVNDESAQNKDKTSVNFKKGNQVTQLLNIILKSIMRDEKFQEIG
KNSKFYDVNSKSDIIIKSRDGSTSALEAYKGFTFNVTPTQDRLYLMVDYCSRIIRKETAL
EYLKNNNNQLSGLSVITKYNNYQTYLIDRVDDRKTPSSTFLNQKTKTQISFAQYYKERYN
IQIRDMRQPLLVHKRKYREPNTNIQKVEEVYLIPELCNMTGMTDEQRENFQAMKEVATHT
KLTPQERYQNSVNNCKFLSNKTSSSGIKIDERSNLIDAVQLRAPKVTLGGNKTANTERGN
FDMRAPTLDKIEFKDWSLICNKKDDQSADNFIDTLKKASQTFGITVNDPCFLAQRDWNAN
NWIRSLDEDFSNNGLPQFVLSFGQANSGLYSGLKRFLTSEVGIESQHVNPRSLQKNGMSV
ASKIALQIASKLGRRIWQVETPTGIDKNTMIIGIETSMKKINRQQVIGVVASIDKDFTKY
FSDVEIRKENDTTFPTLSKIVTKAIQAYVKNTKVVPAEVIIYRQGLGEGQIQQSFNLEIK
AIQNGFSNFKKDYNPRLAFFQVNRKIGQKFYQQPQGDKSEVSNPASGTIVASQVVQNNFE
FFMAAQNCNSGVCTPTKYTCLYNNTNLKEDQIWQLTYYQTFNYYNWQGPVRVPAAMKYAE
KLAKFVSDTIQESANENLANSLFYL

>TTHERM_000503900(gene)
ATGCTTTAATAGTTACCAAAAAGACCACCTAAATCTTCAGCTCAAGAGATCAGCAAAATA
TGCAGAAACATTAAGCTTCTTACAAATATGTTTACTATGTAAGTAGAAGCCCCCTAGTCT
TCTGATTCTGATGGACCTCAAGGTTGTGTCTACAAACTTCTTTGTTATCAATATGATGTT
GAATTCTCTCCTAATATTGCTGAGGACAACAGATCCCTAAGATACAAAATCTTTAAAGAA
GCTCGCAGAGATATTGAGACAATCATAGGAAAATTCTCTTTTTCAGGAAAATCTCTATTC
TCAATGAAAAATCTTAGCATAGTTAAGCTTAACAAAATAAAGAATATTGATGCGATCAAT
GTTGATGGACAAAAATACTCTATCCTTTTGAGGTTCACAAAAAGCTTTGAAGTGAATGAT
GAGTCTGCTTAAAATAAAGACAAGACGTCTGTAAACTTCAAAAAAGGCAATCAAGTCACT
TAGTTGCTCAATATCATCTTAAAATCTATCATGCGTGATGAGAAATTTTAGGAAATTGGA
AAGAATTCTAAGTTCTATGATGTTAACTCTAAGAGTGATATTATAATCAAAAGTAGAGAT
GGATCTACTAGTGCCCTCGAAGCCTACAAAGGATTCACTTTCAATGTCACTCCAACCTAA
GACAGACTTTACTTAATGGTTGATTACTGCAGTAGAATTATCAGAAAAGAAACTGCATTA
GAATACTTAAAGAATAACAACAATTAATTGTCTGGTCTTTCAGTAATTACCAAATACAAT
AATTATCAAACTTACTTAATCGACAGAGTAGATGACAGAAAAACTCCTAGTTCTACTTTC
CTTAACTAAAAAACTAAAACCTAAATTAGTTTCGCATAATACTACAAGGAGCGTTATAAT
ATCTAAATCAGAGATATGAGACAGCCCTTACTTGTTCATAAAAGAAAATACAGAGAGCCT
AATACTAACATCTAAAAGGTTGAAGAAGTTTATTTAATTCCTGAATTATGCAATATGACA
GGAATGACAGACGAATAACGTGAGAATTTCTAAGCAATGAAGGAAGTTGCTACTCATACT
AAACTTACCCCATAAGAAAGATATCAAAATTCTGTTAATAATTGTAAATTTTTAAGTAAC
AAAACAAGTTCTAGTGGAATTAAAATTGATGAAAGAAGCAATTTGATAGATGCTGTTTAA
TTAAGAGCTCCTAAAGTCACTTTAGGTGGTAATAAGACTGCTAATACCGAAAGAGGTAAT
TTTGACATGAGAGCTCCAACCTTAGATAAAATTGAGTTTAAAGATTGGTCTCTTATATGT
AACAAAAAAGATGACTAAAGTGCAGATAATTTTATAGACACTCTTAAGAAGGCTTCCTAG
ACATTTGGAATTACTGTCAACGATCCTTGCTTTTTGGCCTAGAGAGACTGGAATGCTAAT
AACTGGATTAGATCTCTCGATGAAGACTTTTCCAATAATGGTTTACCTCAATTTGTTTTG
AGTTTCGGTCAAGCCAATAGTGGTTTATACTCTGGTTTAAAGAGATTTTTAACTTCAGAA
GTAGGTATAGAATCCTAGCATGTTAATCCAAGATCCCTCCAAAAGAACGGAATGAGTGTT
GCTTCAAAAATTGCTCTACAAATTGCCTCTAAACTAGGTAGAAGAATCTGGTAAGTTGAA
ACCCCAACTGGAATTGATAAAAACACCATGATTATCGGTATAGAGACCAGTATGAAGAAG
ATCAATAGATAATAGGTGATTGGCGTTGTTGCTTCCATCGACAAAGACTTTACCAAATAC
TTTTCTGATGTTGAAATTAGGAAAGAAAATGATACTACTTTCCCTACTCTCTCTAAGATT
GTTACCAAAGCCATATAGGCTTATGTTAAAAATACCAAAGTTGTTCCTGCTGAAGTGATT
ATTTACAGATAAGGACTTGGTGAAGGTCAAATTCAATAGAGTTTTAATCTTGAAATTAAA
GCCATTTAGAATGGTTTTAGCAACTTTAAGAAAGATTACAATCCACGCTTAGCCTTTTTC
TAGGTTAACAGAAAAATTGGCCAAAAGTTCTATCAATAGCCTTAAGGTGACAAATCAGAA
GTTTCAAATCCTGCTTCAGGTACTATTGTAGCCTCTTAAGTTGTTTAGAACAACTTTGAA
TTCTTCATGGCTGCATAAAACTGCAATTCTGGTGTTTGTACACCCACTAAGTACACTTGT
TTGTATAACAACACCAACTTAAAAGAGGATCAAATCTGGTAATTAACTTACTATCAAACA
TTCAACTATTATAACTGGCAAGGACCTGTAAGAGTACCTGCTGCTATGAAGTACGCAGAA
AAACTTGCTAAGTTTGTTAGTGACACTATCCAAGAATCTGCCAATGAAAACTTGGCTAAC
AGTCTTTTCTATTTGTGA