Identifiers and Description

Gene Model Identifier

TTHERM_000503900

Standard Name

TWI6 (Tetrahymena piWI 6)

Aliases

None

Description

piwi-like Twi9p protein

Genome Browser (Macronucleus)

GBrowse

Genome Browser (Micronucleus)

GBrowse

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

No Data fetched for Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 13.9%

TetraMine Data

TTHERM_000503900

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_14909.19.997093137033517e-262piwi domain-containing protein
(808 aa)
OxytrichaContig16116.0.g203.9991157591502974e-89Piwi domain
DictyBaseDDB_G02762995.000518477595783e-71agnA on chromosome: 2 position
6579134 to 6582276
WormBaseWBGene000041782.9987670792171964e-67locus:prg-1 status:Confirmed
UniProt:P90786 protein_id
:CAA98113.1
Stentor CoeruleusSteCoe_50141.1089390193121365e-40

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:19656801: Couvillion MT, Lee SR, Hogstad B, Malone CD, Tonkin LA, Sachidanandam R, Hannon GJ, Collins K (2009) Sequence, biogenesis, and function of diverse small RNA classes bound to the Piwi family proteins of Tetrahymena thermophila. Genes & development 23(17):2016-32

Sequences

>TTHERM_000503900(coding)
ATGCTTTAATAGTTACCAAAAAGACCACCTAAATCTTCAGCTCAAGAGATCAGCAAAATA
TGCAGAAACATTAAGCTTCTTACAAATATGTTTACTATGTAAGTAGAAGCCCCCTAGTCT
TCTGATTCTGATGGACCTCAAGGTTGTGTCTACAAACTTCTTTGTTATCAATATGATGTT
GAATTCTCTCCTAATATTGCTGAGGACAACAGATCCCTAAGATACAAAATCTTTAAAGAA
GCTCGCAGAGATATTGAGACAATCATAGGAAAATTCTCTTTTTCAGGAAAATCTCTATTC
TCAATGAAAAATCTTAGCATAGTTAAGCTTAACAAAATAAAGAATATTGATGCGATCAAT
GTTGATGGACAAAAATACTCTATCCTTTTGAGGTTCACAAAAAGCTTTGAAGTGAATGAT
GAGTCTGCTTAAAATAAAGACAAGACGTCTGTAAACTTCAAAAAAGGCAATCAAGTCACT
TAGTTGCTCAATATCATCTTAAAATCTATCATGCGTGATGAGAAATTTTAGGAAATTGGA
AAGAATTCTAAGTTCTATGATGTTAACTCTAAGAGTGATATTATAATCAAAAGTAGAGAT
GGATCTACTAGTGCCCTCGAAGCCTACAAAGGATTCACTTTCAATGTCACTCCAACCTAA
GACAGACTTTACTTAATGGTTGATTACTGCAGTAGAATTATCAGAAAAGAAACTGCATTA
GAATACTTAAAGAATAACAACAATTAATTGTCTGGTCTTTCAGTAATTACCAAATACAAT
AATTATCAAACTTACTTAATCGACAGAGTAGATGACAGAAAAACTCCTAGTTCTACTTTC
CTTAACTAAAAAACTAAAACCTAAATTAGTTTCGCATAATACTACAAGGAGCGTTATAAT
ATCTAAATCAGAGATATGAGACAGCCCTTACTTGTTCATAAAAGAAAATACAGAGAGCCT
AATACTAACATCTAAAAGGTTGAAGAAGTTTATTTAATTCCTGAATTATGCAATATGACA
GGAATGACAGACGAATAACGTGAGAATTTCTAAGCAATGAAGGAAGTTGCTACTCATACT
AAACTTACCCCATAAGAAAGATATCAAAATTCTGTTAATAATTGTAAATTTTTAAGTAAC
AAAACAAGTTCTAGTGGAATTAAAATTGATGAAAGAAGCAATTTGATAGATGCTGTTTAA
TTAAGAGCTCCTAAAGTCACTTTAGGTGGTAATAAGACTGCTAATACCGAAAGAGGTAAT
TTTGACATGAGAGCTCCAACCTTAGATAAAATTGAGTTTAAAGATTGGTCTCTTATATGT
AACAAAAAAGATGACTAAAGTGCAGATAATTTTATAGACACTCTTAAGAAGGCTTCCTAG
ACATTTGGAATTACTGTCAACGATCCTTGCTTTTTGGCCTAGAGAGACTGGAATGCTAAT
AACTGGATTAGATCTCTCGATGAAGACTTTTCCAATAATGGTTTACCTCAATTTGTTTTG
AGTTTCGGTCAAGCCAATAGTGGTTTATACTCTGGTTTAAAGAGATTTTTAACTTCAGAA
GTAGGTATAGAATCCTAGCATGTTAATCCAAGATCCCTCCAAAAGAACGGAATGAGTGTT
GCTTCAAAAATTGCTCTACAAATTGCCTCTAAACTAGGTAGAAGAATCTGGTAAGTTGAA
ACCCCAACTGGAATTGATAAAAACACCATGATTATCGGTATAGAGACCAGTATGAAGAAG
ATCAATAGATAATAGGTGATTGGCGTTGTTGCTTCCATCGACAAAGACTTTACCAAATAC
TTTTCTGATGTTGAAATTAGGAAAGAAAATGATACTACTTTCCCTACTCTCTCTAAGATT
GTTACCAAAGCCATATAGGCTTATGTTAAAAATACCAAAGTTGTTCCTGCTGAAGTGATT
ATTTACAGATAAGGACTTGGTGAAGGTCAAATTCAATAGAGTTTTAATCTTGAAATTAAA
GCCATTTAGAATGGTTTTAGCAACTTTAAGAAAGATTACAATCCACGCTTAGCCTTTTTC
TAGGTTAACAGAAAAATTGGCCAAAAGTTCTATCAATAGCCTTAAGGTGACAAATCAGAA
GTTTCAAATCCTGCTTCAGGTACTATTGTAGCCTCTTAAGTTGTTTAGAACAACTTTGAA
TTCTTCATGGCTGCATAAAACTGCAATTCTGGTGTTTGTACACCCACTAAGTACACTTGT
TTGTATAACAACACCAACTTAAAAGAGGATCAAATCTGGTAATTAACTTACTATCAAACA
TTCAACTATTATAACTGGCAAGGACCTGTAAGAGTACCTGCTGCTATGAAGTACGCAGAA
AAACTTGCTAAGTTTGTTAGTGACACTATCCAAGAATCTGCCAATGAAAACTTGGCTAAC
AGTCTTTTCTATTTGTGA


>TTHERM_000503900(protein)
MLQQLPKRPPKSSAQEISKICRNIKLLTNMFTMQVEAPQSSDSDGPQGCVYKLLCYQYDV
EFSPNIAEDNRSLRYKIFKEARRDIETIIGKFSFSGKSLFSMKNLSIVKLNKIKNIDAIN
VDGQKYSILLRFTKSFEVNDESAQNKDKTSVNFKKGNQVTQLLNIILKSIMRDEKFQEIG
KNSKFYDVNSKSDIIIKSRDGSTSALEAYKGFTFNVTPTQDRLYLMVDYCSRIIRKETAL
EYLKNNNNQLSGLSVITKYNNYQTYLIDRVDDRKTPSSTFLNQKTKTQISFAQYYKERYN
IQIRDMRQPLLVHKRKYREPNTNIQKVEEVYLIPELCNMTGMTDEQRENFQAMKEVATHT
KLTPQERYQNSVNNCKFLSNKTSSSGIKIDERSNLIDAVQLRAPKVTLGGNKTANTERGN
FDMRAPTLDKIEFKDWSLICNKKDDQSADNFIDTLKKASQTFGITVNDPCFLAQRDWNAN
NWIRSLDEDFSNNGLPQFVLSFGQANSGLYSGLKRFLTSEVGIESQHVNPRSLQKNGMSV
ASKIALQIASKLGRRIWQVETPTGIDKNTMIIGIETSMKKINRQQVIGVVASIDKDFTKY
FSDVEIRKENDTTFPTLSKIVTKAIQAYVKNTKVVPAEVIIYRQGLGEGQIQQSFNLEIK
AIQNGFSNFKKDYNPRLAFFQVNRKIGQKFYQQPQGDKSEVSNPASGTIVASQVVQNNFE
FFMAAQNCNSGVCTPTKYTCLYNNTNLKEDQIWQLTYYQTFNYYNWQGPVRVPAAMKYAE
KLAKFVSDTIQESANENLANSLFYL


>TTHERM_000503900(gene)
ATGCTTTAATAGTTACCAAAAAGACCACCTAAATCTTCAGCTCAAGAGATCAGCAAAATA
TGCAGAAACATTAAGCTTCTTACAAATATGTTTACTATGTAAGTAGAAGCCCCCTAGTCT
TCTGATTCTGATGGACCTCAAGGTTGTGTCTACAAACTTCTTTGTTATCAATATGATGTT
GAATTCTCTCCTAATATTGCTGAGGACAACAGATCCCTAAGATACAAAATCTTTAAAGAA
GCTCGCAGAGATATTGAGACAATCATAGGAAAATTCTCTTTTTCAGGAAAATCTCTATTC
TCAATGAAAAATCTTAGCATAGTTAAGCTTAACAAAATAAAGAATATTGATGCGATCAAT
GTTGATGGACAAAAATACTCTATCCTTTTGAGGTTCACAAAAAGCTTTGAAGTGAATGAT
GAGTCTGCTTAAAATAAAGACAAGACGTCTGTAAACTTCAAAAAAGGCAATCAAGTCACT
TAGTTGCTCAATATCATCTTAAAATCTATCATGCGTGATGAGAAATTTTAGGAAATTGGA
AAGAATTCTAAGTTCTATGATGTTAACTCTAAGAGTGATATTATAATCAAAAGTAGAGAT
GGATCTACTAGTGCCCTCGAAGCCTACAAAGGATTCACTTTCAATGTCACTCCAACCTAA
GACAGACTTTACTTAATGGTTGATTACTGCAGTAGAATTATCAGAAAAGAAACTGCATTA
GAATACTTAAAGAATAACAACAATTAATTGTCTGGTCTTTCAGTAATTACCAAATACAAT
AATTATCAAACTTACTTAATCGACAGAGTAGATGACAGAAAAACTCCTAGTTCTACTTTC
CTTAACTAAAAAACTAAAACCTAAATTAGTTTCGCATAATACTACAAGGAGCGTTATAAT
ATCTAAATCAGAGATATGAGACAGCCCTTACTTGTTCATAAAAGAAAATACAGAGAGCCT
AATACTAACATCTAAAAGGTTGAAGAAGTTTATTTAATTCCTGAATTATGCAATATGACA
GGAATGACAGACGAATAACGTGAGAATTTCTAAGCAATGAAGGAAGTTGCTACTCATACT
AAACTTACCCCATAAGAAAGATATCAAAATTCTGTTAATAATTGTAAATTTTTAAGTAAC
AAAACAAGTTCTAGTGGAATTAAAATTGATGAAAGAAGCAATTTGATAGATGCTGTTTAA
TTAAGAGCTCCTAAAGTCACTTTAGGTGGTAATAAGACTGCTAATACCGAAAGAGGTAAT
TTTGACATGAGAGCTCCAACCTTAGATAAAATTGAGTTTAAAGATTGGTCTCTTATATGT
AACAAAAAAGATGACTAAAGTGCAGATAATTTTATAGACACTCTTAAGAAGGCTTCCTAG
ACATTTGGAATTACTGTCAACGATCCTTGCTTTTTGGCCTAGAGAGACTGGAATGCTAAT
AACTGGATTAGATCTCTCGATGAAGACTTTTCCAATAATGGTTTACCTCAATTTGTTTTG
AGTTTCGGTCAAGCCAATAGTGGTTTATACTCTGGTTTAAAGAGATTTTTAACTTCAGAA
GTAGGTATAGAATCCTAGCATGTTAATCCAAGATCCCTCCAAAAGAACGGAATGAGTGTT
GCTTCAAAAATTGCTCTACAAATTGCCTCTAAACTAGGTAGAAGAATCTGGTAAGTTGAA
ACCCCAACTGGAATTGATAAAAACACCATGATTATCGGTATAGAGACCAGTATGAAGAAG
ATCAATAGATAATAGGTGATTGGCGTTGTTGCTTCCATCGACAAAGACTTTACCAAATAC
TTTTCTGATGTTGAAATTAGGAAAGAAAATGATACTACTTTCCCTACTCTCTCTAAGATT
GTTACCAAAGCCATATAGGCTTATGTTAAAAATACCAAAGTTGTTCCTGCTGAAGTGATT
ATTTACAGATAAGGACTTGGTGAAGGTCAAATTCAATAGAGTTTTAATCTTGAAATTAAA
GCCATTTAGAATGGTTTTAGCAACTTTAAGAAAGATTACAATCCACGCTTAGCCTTTTTC
TAGGTTAACAGAAAAATTGGCCAAAAGTTCTATCAATAGCCTTAAGGTGACAAATCAGAA
GTTTCAAATCCTGCTTCAGGTACTATTGTAGCCTCTTAAGTTGTTTAGAACAACTTTGAA
TTCTTCATGGCTGCATAAAACTGCAATTCTGGTGTTTGTACACCCACTAAGTACACTTGT
TTGTATAACAACACCAACTTAAAAGAGGATCAAATCTGGTAATTAACTTACTATCAAACA
TTCAACTATTATAACTGGCAAGGACCTGTAAGAGTACCTGCTGCTATGAAGTACGCAGAA
AAACTTGCTAAGTTTGTTAGTGACACTATCCAAGAATCTGCCAATGAAAACTTGGCTAAC
AGTCTTTTCTATTTGTGA