Identifiers and Description

Gene Model Identifier

TTHERM_00506910

Standard Name

TWI4 (Tetrahymena piWI 4)

Aliases

PreTt10674 | 64.m00154 | 3723.m00019

Description

piwi-like Twi9p protein; Piwi domain containing protein

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

GBrowse

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 14.5%

TetraMine Data

TTHERM_00506910

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_14909.19.997093137033517e-262piwi domain-containing protein
(808 aa)
OxytrichaContig16116.0.g206.001309080488961e-82Piwi domain
WormBaseWBGene000041781.0000310450948521e-65locus:prg-1 status:Confirmed
UniProt:P90786 protein_id
:CAA98113.1
DictyBaseDDB_G02762993.9989468726312675e-65agnA on chromosome: 2 position
6579134 to 6582276
Stentor CoeruleusSteCoe_14134.0795586671775603e-41

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:19656801: Couvillion MT, Lee SR, Hogstad B, Malone CD, Tonkin LA, Sachidanandam R, Hannon GJ, Collins K (2009) Sequence, biogenesis, and function of diverse small RNA classes bound to the Piwi family proteins of Tetrahymena thermophila. Genes & development 23(17):2016-32

Sequences

>TTHERM_00506910(coding)
ATGCTTTAATAGTTACCTAGTAGACCTCCTATATCATCTACTTAAGAGATCAGCCAAATA
TGCAAAAATATTAAACTGCTTACAAATATGTTTGCTATGTAAGTAGAAGCCACCTAGTCT
TCTGATTCTGATGGACCTCAAGGCTTTGTTAACAAAGTTGTTTGCTATCAATATGATGTT
GTATTCTCTCCTGATATTGCTGAGGACAATAGAAATCTAAGATACAAAATCTTTAAAGAA
GCACGCAGGAACATTGAATAACTCATCGGAAAATTCTCCTTTTCAGGAATGTCTCTATTC
TCAATGAGAAAACTTAGCTAAGATAAGATTAATAAAATCAAGAATAATATTGATGCAATC
ATTGTAGACAAACAAAAATACTCTATCCATTTGGTGTTCACAAAAAGCTTTGAAGTAAAT
GACGAATCTGCTTAAAATTTAGACAAGACCTCTCCAAACTTCAAAAAAGGTAATCAAGTC
ACTTAGTTGCTCAATATCATCTTAAAGTCTATTATGCGTGATGAGAAATTTTTAGAAATC
GGAAAGAATTCTAAGTTCTATGAAGTTAACTCTAAAAGTGACATAATTATCAAAAGTAGA
GAAGGTTCTACTAGTGGTCTCGAAGCCTACAAAGGATTCACTTTCAACGTCACTCCAACC
TAAGACAAAATTTACTTAATGGTTGACTACTGCAGTAGAATTATCAGAAAAGAAACTGCT
TTAGAATACTTAAAGAATAACAACAATTAATTATCTGGTCTCTCAGTAATTACCAAATAC
AATAATTACCAAACTTACTTAATCGATAAAGTAGATGATAAAAAAACACCTAGTTCTACT
TTCCTCAACTCCAAAACTAACATTCAAATTAGCTTCGCCTAATACTACAAGGAACGTTAT
AATATTTAAATTAGAGACATGAAATAACCCTTGCTTGTTCACAAAAGAAAATACAGAGAG
GCTAATACTAATATCTAAAAGGTTGAAGAAGTTTATTTAATTCCTGAATTATGCAATATG
ACAGGAATGACAGACGAATAACGTGAGAATTTCCAAGCAATGAAGGAAGTTGCTACTCAT
ACTAAGCTTACTCCTTAAGAAAGATATCAAAATTCTATTAATAATTGTAGATTTTTAAGC
AAAAAAACAAGTTCAAGTGGAATTAAAATTGATGAAAGAAGCAATTTAATAGATGCTGTT
TAATTAAGAACTCCTAAAGTCACTCTAGGAGGTAATAAGACTGCTAATACTGATAGAGGT
AATTTTGACATGAGAACTCCTACCTTAGATAAAATCGAGTTTAAGGATTGGTCTCTTATT
TATAACCAAAAAGATGAGAAATATGTGGATGATTTCGTAGACACTCTTAAGAAGGCTTCC
TAGACATATGGAATAATTGTCAACGATCCTTACTTCTTCGCCGAAAGAGATTCGAATGCT
AATAATTGGATTAAATCTCTGGATGAGGACTTTTCCAAAAATGACTTACCTCAATTTGTT
TTGAGTTTCGGTCAAGTTAATTCTGGATTTTACTCTAGTTTAAAGAAATTTTTAACTTCA
GAAGCAGGAATAGAATCCCAGCATGTTACTCCAAAATCTCTTCAAAAGAACGGAATGAGT
GTGGCTTCAAAAATTGCTTTGTAAATTGCCTCTAAGCTTGGTAGAAGAATTTGGTAAGTT
GAAACACCTCGTGGAATTGATAAAAATACCATGATTATAGGTATTGAGACCAGCATGAAA
AAGGTTAAATAGTAGTAGGTTGTAGGTGTTGTTGCTTCCATCGACAAAGACTTTACCAAA
TACTTTTCTGATGTTGAAATTAGAAAAGACAATGATACTACTCTCCCTACTCTCTCTAAG
ATTGTTACCAAAGCCATATAAGCTTATGTTAAAAATACCAAAAGTGTTCCTGCTGAAGTC
ATTGTTTACAGATAAGGACTTGGTGAAGGTTAAATTCAATAGAGTTTTAACCTTGAAATT
AAGGCCATTTAGAATGGTTTTAGTAACTTCAAGAACGATTTCAATCCTCATTTAGCCTTT
TTCTAGGTTAATAGAAAAATTGGCCAAAAGTTCTATTAATCGCCTTAAGGTGATAAAGTA
GAAGTCTCAAATCCTGCTTCAGGTACTATTGTAGCCTCTTAAGTTGTTTAGAACAACTTC
GAATTCTTCATGGCTGCATAACACTGCAATTCTGGTGTTTGTACACCCACTAAATACACC
TGTTTGTACAACAACACTAACTTAAAAGAAGATTAAATCTGGTAATTAACTTACTATCAA
ACTTTCAATTACTATAACTGGCAAGGACCTGTAAGAGTGCCTGCTGCTATGAAGTACGCA
GAAAAACTTGCTAAATTCGTAAGTGACACTATCTAAGAAGCAGCCAATGAAAATTTGACT
AATAGTCTTTTCTACTTGTGA


>TTHERM_00506910(protein)
MLQQLPSRPPISSTQEISQICKNIKLLTNMFAMQVEATQSSDSDGPQGFVNKVVCYQYDV
VFSPDIAEDNRNLRYKIFKEARRNIEQLIGKFSFSGMSLFSMRKLSQDKINKIKNNIDAI
IVDKQKYSIHLVFTKSFEVNDESAQNLDKTSPNFKKGNQVTQLLNIILKSIMRDEKFLEI
GKNSKFYEVNSKSDIIIKSREGSTSGLEAYKGFTFNVTPTQDKIYLMVDYCSRIIRKETA
LEYLKNNNNQLSGLSVITKYNNYQTYLIDKVDDKKTPSSTFLNSKTNIQISFAQYYKERY
NIQIRDMKQPLLVHKRKYREANTNIQKVEEVYLIPELCNMTGMTDEQRENFQAMKEVATH
TKLTPQERYQNSINNCRFLSKKTSSSGIKIDERSNLIDAVQLRTPKVTLGGNKTANTDRG
NFDMRTPTLDKIEFKDWSLIYNQKDEKYVDDFVDTLKKASQTYGIIVNDPYFFAERDSNA
NNWIKSLDEDFSKNDLPQFVLSFGQVNSGFYSSLKKFLTSEAGIESQHVTPKSLQKNGMS
VASKIALQIASKLGRRIWQVETPRGIDKNTMIIGIETSMKKVKQQQVVGVVASIDKDFTK
YFSDVEIRKDNDTTLPTLSKIVTKAIQAYVKNTKSVPAEVIVYRQGLGEGQIQQSFNLEI
KAIQNGFSNFKNDFNPHLAFFQVNRKIGQKFYQSPQGDKVEVSNPASGTIVASQVVQNNF
EFFMAAQHCNSGVCTPTKYTCLYNNTNLKEDQIWQLTYYQTFNYYNWQGPVRVPAAMKYA
EKLAKFVSDTIQEAANENLTNSLFYL


>TTHERM_00506910(gene)
ATGCTTTAATAGTTACCTAGTAGACCTCCTATATCATCTACTTAAGAGATCAGCCAAATA
TGCAAAAATATTAAACTGCTTACAAATATGTTTGCTATGTAAGTAGAAGCCACCTAGTCT
TCTGATTCTGATGGACCTCAAGGCTTTGTTAACAAAGTTGTTTGCTATCAATATGATGTT
GTATTCTCTCCTGATATTGCTGAGGACAATAGAAATCTAAGATACAAAATCTTTAAAGAA
GCACGCAGGAACATTGAATAACTCATCGGAAAATTCTCCTTTTCAGGAATGTCTCTATTC
TCAATGAGAAAACTTAGCTAAGATAAGATTAATAAAATCAAGAATAATATTGATGCAATC
ATTGTAGACAAACAAAAATACTCTATCCATTTGGTGTTCACAAAAAGCTTTGAAGTAAAT
GACGAATCTGCTTAAAATTTAGACAAGACCTCTCCAAACTTCAAAAAAGGTAATCAAGTC
ACTTAGTTGCTCAATATCATCTTAAAGTCTATTATGCGTGATGAGAAATTTTTAGAAATC
GGAAAGAATTCTAAGTTCTATGAAGTTAACTCTAAAAGTGACATAATTATCAAAAGTAGA
GAAGGTTCTACTAGTGGTCTCGAAGCCTACAAAGGATTCACTTTCAACGTCACTCCAACC
TAAGACAAAATTTACTTAATGGTTGACTACTGCAGTAGAATTATCAGAAAAGAAACTGCT
TTAGAATACTTAAAGAATAACAACAATTAATTATCTGGTCTCTCAGTAATTACCAAATAC
AATAATTACCAAACTTACTTAATCGATAAAGTAGATGATAAAAAAACACCTAGTTCTACT
TTCCTCAACTCCAAAACTAACATTCAAATTAGCTTCGCCTAATACTACAAGGAACGTTAT
AATATTTAAATTAGAGACATGAAATAACCCTTGCTTGTTCACAAAAGAAAATACAGAGAG
GCTAATACTAATATCTAAAAGGTTGAAGAAGTTTATTTAATTCCTGAATTATGCAATATG
ACAGGAATGACAGACGAATAACGTGAGAATTTCCAAGCAATGAAGGAAGTTGCTACTCAT
ACTAAGCTTACTCCTTAAGAAAGATATCAAAATTCTATTAATAATTGTAGATTTTTAAGC
AAAAAAACAAGTTCAAGTGGAATTAAAATTGATGAAAGAAGCAATTTAATAGATGCTGTT
TAATTAAGAACTCCTAAAGTCACTCTAGGAGGTAATAAGACTGCTAATACTGATAGAGGT
AATTTTGACATGAGAACTCCTACCTTAGATAAAATCGAGTTTAAGGATTGGTCTCTTATT
TATAACCAAAAAGATGAGAAATATGTGGATGATTTCGTAGACACTCTTAAGAAGGCTTCC
TAGACATATGGAATAATTGTCAACGATCCTTACTTCTTCGCCGAAAGAGATTCGAATGCT
AATAATTGGATTAAATCTCTGGATGAGGACTTTTCCAAAAATGACTTACCTCAATTTGTT
TTGAGTTTCGGTCAAGTTAATTCTGGATTTTACTCTAGTTTAAAGAAATTTTTAACTTCA
GAAGCAGGAATAGAATCCCAGCATGTTACTCCAAAATCTCTTCAAAAGAACGGAATGAGT
GTGGCTTCAAAAATTGCTTTGTAAATTGCCTCTAAGCTTGGTAGAAGAATTTGGTAAGTT
GAAACACCTCGTGGAATTGATAAAAATACCATGATTATAGGTATTGAGACCAGCATGAAA
AAGGTTAAATAGTAGTAGGTTGTAGGTGTTGTTGCTTCCATCGACAAAGACTTTACCAAA
TACTTTTCTGATGTTGAAATTAGAAAAGACAATGATACTACTCTCCCTACTCTCTCTAAG
ATTGTTACCAAAGCCATATAAGCTTATGTTAAAAATACCAAAAGTGTTCCTGCTGAAGTC
ATTGTTTACAGATAAGGACTTGGTGAAGGTTAAATTCAATAGAGTTTTAACCTTGAAATT
AAGGCCATTTAGAATGGTTTTAGTAACTTCAAGAACGATTTCAATCCTCATTTAGCCTTT
TTCTAGGTTAATAGAAAAATTGGCCAAAAGTTCTATTAATCGCCTTAAGGTGATAAAGTA
GAAGTCTCAAATCCTGCTTCAGGTACTATTGTAGCCTCTTAAGTTGTTTAGAACAACTTC
GAATTCTTCATGGCTGCATAACACTGCAATTCTGGTGTTTGTACACCCACTAAATACACC
TGTTTGTACAACAACACTAACTTAAAAGAAGATTAAATCTGGTAATTAACTTACTATCAA
ACTTTCAATTACTATAACTGGCAAGGACCTGTAAGAGTGCCTGCTGCTATGAAGTACGCA
GAAAAACTTGCTAAATTCGTAAGTGACACTATCTAAGAAGCAGCCAATGAAAATTTGACT
AATAGTCTTTTCTACTTGTGA