Identifiers and Description

Gene Model Identifier

TTHERM_00052160

Standard Name

TTNB (Tetrin B)

Aliases

PreTt11396 | 3.m01778 | 3824.m03150

Description

Tetrin B; novel, insoluble cytoskeletal protein with molecular mass of around 85 kD; unique to ciliates

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

No Data fetched for Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10%

TetraMine Data

TTHERM_00052160

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_01552.19.997093137033517e-262tetrin B protein (731 aa)
OxytrichaContig17235.0.g460.0000000000010000211161514907GCC2 and GCC3

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:15134263: McLaughlin NB, Buhse HE (2004) Localization by indirect immunofluorescence of tetrin, actin, and centrin to the oral apparatus and buccal cavity of the macrostomal form of Tetrahymena vorax. The Journal of eukaryotic microbiology 51(2):253-7
  2. Ref:12674474: Honts JE, Williams NE (2003) Novel cytoskeletal proteins in the cortex of Tetrahymena. The Journal of eukaryotic microbiology 50(1):9-14
  3. Ref:12095113: Clerot J, Iftode F, Budin K, Jeanmaire-Wolf R, Coffe G, Fleury-Aubusson A (2002) Fine oral filaments in Paramecium: a biochemical and immunological analysis. The Journal of eukaryotic microbiology 48(2):234-45
  4. Ref:10965956: Brimmer A, Weber K (2000) The cDNA sequences of three tetrins, the structural proteins of the Tetrahymena oral filaments, show that they are novel cytoskeletal proteins. Protist 151(2):171-80
  5. Ref:1476826: Dress VM, Yi H, Musal MR, Williams NE (1993) Tetrin polypeptides are colocalized in the cortex of Tetrahymena. Journal of structural biology 108(3):187-94
  6. Ref:2211871: Honts JE, Williams NE (1990) Tetrins: polypeptides that form bundled filaments in Tetrahymena. Journal of cell science 96 ( Pt 2)( ):293-302

Sequences

>TTHERM_00052160(coding)
ATGAGCACCACTGATTATAAATCTTACTCTCCTTCTAAGACATTCTCTTAAAGATACACT
ACTAAGACTCCTCCCAAGTATGCTGAGCACAGAGATGCAACTTACAACACCACATTGAGT
CCTTATTAAACTCCTAATAGAGATACTTATTCTAGAGCTGGAGATGAAACTGATATCAGC
GAAAACCTTAGTGCTTCAAAGATCAGACTTGACAACTAAGTTAGAGACATTAAAACACTT
CTTGACACAAAATACAATCCTGAAATTGATTCATGGAGAAGCAAATGGTAAGAATGTGAA
GTTAGAAGAAACTTCTTGGAAACCGAAAACCAAAGATTAATCAGAGAAATTGAGTTCTGG
AAGAGCAAGAGCAGTACTGCTGACATTGAAAAGGCTTAGTAATTAATTCAGTCAGAACAA
TTAAAAAACAGCTAATTAGAAACCATTCGTTAGACAGCTGACAATAGGAGCTACAGTCTC
TTAATGGAAGCTGATAGATTACGTAGCCTTCTTGCTACTAAGATTGAAGAATGCAATGAA
ATCAAGGCTAACTACAGCAAGTTAGAATTATTCTATGCTGAAAATGCCGACAAGGATGAA
GTTGCAAGAGACTATGAACAACGTATCCAACGTCTTAAGAATGAATACTCAGATAGATTG
AGAGAAGTTGACGACTTAAAGCAATAAAGAAACTAACTCGAGTTAGAAAGTTACGAATTA
GAAAAGGTTCAAAGAGAGCAAGAAAGTCTCAAGAACCTCCTCGAATCAAAGAGAGAAGAA
AACACCAGATTGAGAAGAGAAAAGACTGAATTAGAAGTTGAAAATTACAAGTCAAAGAAG
GCCGAAAACGCCCTCCTTGAAAAGGAAGCCCTCCTCAAGAGCTAAATTGAAGAACTTGAA
AACGAACACGTTAATGCTGAAGAACTTAGAAAATCTAACTTCTTGCAAAAGAGTATGGTT
CACTCTAATGTTCATGATGAATTAAGAAAATCCTTCCACGCTGAAAAAACCTAATTAGAA
GACGAAGTTGAAGAACATCAAAAACTTGCTGGATAGAAGATTAATGAACATGATGAACTT
AGAAGATCTTACCACGACCTCACTACAGAACTCGCAAAGGCTGAAGATGATGACAAGATG
GCTGAAGCTGAACTCCAAATTTGGAAGGAAAAGGCTGCTGAAGCTGAAAAATTGAAGGAA
GCTGAAATTGCTCGTGCTAATCGTTTAAAAGAAGCCTCCATTTAATTAACTATTTCTGAA
AATCTTAAAGAAAAAAAACAATTAGAAGAGAGAATGGATACCTTAAACAAAGTCCTCACT
TACAAGGAATAAGATTTGAGCAAGGTCTAATAAGAAGCTCTCCTCACTGAAGTTGAAAAG
AGACAATTAGAAGAAGAAAGAGCTAAATTACAATTCTAAATTGATGAACTTATCAAAAAG
CAAGACGAAAATGATAAGAGATTCTAAATTTAATTGAAATCAAGAGACAATATCCACTCT
TACTCAGTAGAAAAGGCTAGAAAGGAACACGAAAATGAAAAAAGAAGAATTAGCAACTAA
ATTTAAGCCCTCAGAAACGTCATTGATACTAAGAGAGACGAAGCTGAAAGAGCCAGACGT
GAAGCTAATGATTTCTGTTTAAGACTTGTCAATTGTGAAAACAAAGCAAAACAAGCTGAA
GCTGAATAATTATACTGGAAGAACTAAACTGACAGAGTTGTTAGACAAAAGAGCATCGAA
TATCAAGTTGAAAAGGAGTTAACTAACTCATAATTAAGAGACCTTGAAAGAAGTTAATCA
ATTGAAAAAATATAAAAACTCAGAGAAAGTGACTCCATTCGCAATATCATTGACTATAAA
GATAGAGAAGCTCAAGAATTGAGATTAAACTAATCAAGAGCAATTAGCGACCTTGCCCGT
GAAAGATATGAAAAGATTAGAAACTAAACAGAAGCTGAAATCAACAGATCTCGTGCCCTC
GAAGCAGAGAGAGCTAAATATATTGATTTAACTATAAAAGATCAAGTTCATCGTGATAAC
GTTGATTCATTGAGAAGATCTGGTCATTTCTAAAGCAGTGTCTTAAAATCTGAGGCTAAT
ATTTTAACTGACTAATTAATTAGAAAAGATATAGAAGCTAGAGACTGGAGAGATAACTAC
ACTCGTCTTGCCACTTCTCCTTACAGAAAATATTGA


>TTHERM_00052160(protein)
MSTTDYKSYSPSKTFSQRYTTKTPPKYAEHRDATYNTTLSPYQTPNRDTYSRAGDETDIS
ENLSASKIRLDNQVRDIKTLLDTKYNPEIDSWRSKWQECEVRRNFLETENQRLIREIEFW
KSKSSTADIEKAQQLIQSEQLKNSQLETIRQTADNRSYSLLMEADRLRSLLATKIEECNE
IKANYSKLELFYAENADKDEVARDYEQRIQRLKNEYSDRLREVDDLKQQRNQLELESYEL
EKVQREQESLKNLLESKREENTRLRREKTELEVENYKSKKAENALLEKEALLKSQIEELE
NEHVNAEELRKSNFLQKSMVHSNVHDELRKSFHAEKTQLEDEVEEHQKLAGQKINEHDEL
RRSYHDLTTELAKAEDDDKMAEAELQIWKEKAAEAEKLKEAEIARANRLKEASIQLTISE
NLKEKKQLEERMDTLNKVLTYKEQDLSKVQQEALLTEVEKRQLEEERAKLQFQIDELIKK
QDENDKRFQIQLKSRDNIHSYSVEKARKEHENEKRRISNQIQALRNVIDTKRDEAERARR
EANDFCLRLVNCENKAKQAEAEQLYWKNQTDRVVRQKSIEYQVEKELTNSQLRDLERSQS
IEKIQKLRESDSIRNIIDYKDREAQELRLNQSRAISDLARERYEKIRNQTEAEINRSRAL
EAERAKYIDLTIKDQVHRDNVDSLRRSGHFQSSVLKSEANILTDQLIRKDIEARDWRDNY
TRLATSPYRKY


>TTHERM_00052160(gene)
ATGAGCACCACTGATTATAAATCTTACTCTCCTTCTAAGACATTCTCTTAAAGATACACT
ACTAAGACTCCTCCCAAGTATGCTGAGCACAGAGATGCAACTTACAACACCACATTGAGT
CCTTATTAAACTCCTAATAGAGATACTTATTCTAGAGCTGGAGATGAAACTGATATCAGC
GAAAACCTTAGTGCTTCAAAGATCAGACTTGACAACTAAGTTAGAGACATTAAAACACTT
CTTGACACAAAATACAATCGTAAGTTTATTCAAATACTTTTACCTATCACTTCACTTTGG
AATACTTTTACTTAAAGTTATATTATTGCATATGGCAATTTAGCATAATCTTATTGGATA
TAATCAGTCAAAGCAATCTCATATTTTTTGTATTGAAGATTTTCTTTATTTAAATGAAAA
TATTACGCTCAAGGCAAACTATTAAATTCTTTAATAAGAGTAAACTATCCATAAGCAATT
AGCTTTATCGATGCTAATATGTGCAATAAAATATTTCAATTAAGTTTAGCATTATATAAA
ACTGATTGATTAAATTATTTTATTAAAAAATAAAGCTGAAATTGATTCATGGAGAAGCAA
ATGGTAAGAATGTGAAGTTAGAAGAAACTTCTTGGAAACCGAAAACCAAAGATTAATCAG
AGAAATTGAGTTCTGGAAGAGCAAGAGCAGTACTGCTGACATTGAAAAGGCTTAGTAATT
AATTCAGTCAGAACAATTAAAAAACAGCTAATTAGAAACCATTCGTTAGACAGCTGACAA
TAGGAGCTACAGTCTCTTAATGGAAGCTGATAGATTACGTAGCCTTCTTGCTACTAAGAT
TGAAGAATGCAATGAAATCAAGGCTAACTACAGCAAGTTAGAATTATTCTATGCTGAAAA
TGCCGACAAGGATGAAGTTGCAAGAGACTATGAACAACGTATCCAACGTCTTAAGAATGA
ATACTCAGATAGATTGAGAGAAGTTGACGACTTAAAGCAATAAAGAAACTAACTCGAGTT
AGAAAGTTACGAATTAGAAAAGGTTCAAAGAGAGCAAGAAAGTCTCAAGAACCTCCTCGA
ATCAAAGAGAGAAGAAAACACCAGATTGAGAAGAGAAAAGACTGAATTAGAAGTTGAAAA
TTACAAGTCAAAGAAGGCCGAAAACGCCCTCCTTGAAAAGGAAGCCCTCCTCAAGAGCTA
AATTGAAGAACTTGAAAACGAACACGTTAATGTAAGAAATTTTATTTTAAGATTATTTAG
TAAAAGATATTCGAATAAGGAAGTTTAGAAGCCATGTTTTTTTAGTTATAGTTAGTAAAT
TTCATATAGATCTATCAAACAAATTATTAATTAGCTTTTTTAGTTAACTTCGCGCAAGCA
TACAAACGAAGGGAAAAAAACATTACAATAGAAATATAATGAATAAGTCCATGCTATCAA
AACAATCTTTTTCCTTAATTTTTCTCAAAATTAAATGATATTTTAATTTTTGATTATTTC
CCACCCAAGCAAGATTAACCATAAAAGCTAACACTCTTATGAATGGTTTATAATAATTAA
TTCATTTGCAATAAAATTAATTAATTTATAGTCAAAAAATTAAATTTTATTCTGCTGCTT
CTCGTCCAATCAAAAATATTTATTTGGCTTCAAAGATATTTTATCCAGCCCCCAAATCTA
TCTTTTACTTAATGCTGTTTTATTTTGAATTTCACTACAAATTAATTAATTAAAAAATCA
ATCAATCAATCAATATTCGTTAAGAATAAAAATCAATTCAAAATTTGAGATTAATCAAAA
TCTTTCTCTTTAACTGCAAAATTTATATCAAATAATTCTAAATGAATATTAAACCTTGTA
ACTCACCATTATTTTATTTATTAATTAGGCTGAAGAACTTAGAAAATCTAACTTCTTGCA
AAAGAGTATGGTTCACTCTAATGTTCATGATGAATTAAGAAAATCCTTCCACGCTGAAAA
AACCTAATTAGAAGACGAAGTTGAAGAACATCAAAAACTTGCTGGATAGAAGATTAATGA
ACATGATGAACTTAGAAGATCTTACCACGACCTCACTACAGAACTCGCAAAGGCTGAAGA
TGATGACAAGATGGCTGAAGCTGAACTCCAAATTTGGAAGGAAAAGGCTGCTGAAGCTGA
AAAATTGAAGGAAGCTGAAATTGCTCGTGCTAATCGTTTAAAAGAAGCCTCCATTTAATT
AACTATTTCTGAAAATCTTAAAGAAAAAGTAAAATAATTAATTTAAGTTAGCTATTGATC
ATATATTAATTTTATTTTAAATTTATTTAGAAACAATTAGAAGAGAGAATGGATACCTTA
AACAAAGTCCTCACTTACAAGGAATAAGATTTGAGCAAGGTCTAATAAGAAGCTCTCCTC
ACTGAAGTTGAAAAGAGACAATTAGAAGAAGAAAGAGCTAAATTACAATTCTAAATTGAT
GAACTTATCAAAAAGCAAGACGAAAATGATAAGAGATTCTAAATTTAATTGAAATCAAGA
GACAATATCCACTCTTACTCAGTAGAAAAGGCTAGAAAGGAACACGAAAATGAAAAAAGA
AGAATTAGCAACTAAATTTAAGCCCTCAGAAACGTCATTGATACTAAGAGAGACGAAGCT
GAAAGAGCCAGACGTGAAGCTAATGATTTCTGTTTAAGACTTGTCAATTGTGAAAACAAA
GCAAAACAAGCTGAAGTAATTTTGATTATTTTTTAACTTTTAAACTAACTAACCTTTAAC
ATTAGGCTGAATAATTATACTGGAAGAACTAAACTGACAGAGTTGTTAGACAAAAGAGCA
TCGAATATCAAGTTGAAAAGGAGTTAACTAACTCATAATTAAGAGACCTTGAAAGAAGTT
AATCAATTGAAAAAATATAAAAACTCAGAGAAAGTGACTCCATTCGCAATATCATTGACT
ATAAAGATAGAGAAGCTCAAGAATTGAGATTAAACTAATCAAGAGCAATTAGCGACCTTG
CCCGTGAAAGATATGAAAAGATTAGAAACTAAACAGAAGCTGAAATCAACAGATCTCGTG
CCCTCGAAGCAGAGAGAGCTAAATATATTGATTTAACTATAAAAGATCAAGTTCATCGTG
ATAACGTTGATTCATTGAGAAGATCTGGTCATTTCTAAAGCAGTGTCTTAAAATCTGAGG
CTAATATTTTAACTGACTAATTAATTAGAAAAGATATAGAAGCTAGAGACTGGAGAGATA
ACTACACTCGTCTTGCCACTTCTCCTTACAGAAAATATTGA