Identifiers and Description

Gene Model Identifier

TTHERM_01289110

Standard Name

RPL15 (Ribosomal protein of the large subunit)

Aliases

PreTt20220 | PreTt20221 | 310.m00045 | RPL15e

Description

Homolog of yeast RPL15 (/RPL15e)

Genome Browser

Gene Ontology Annotations

Cellular Component

• ribosome (IEA) | GO:0005840
• intracellular (IEA) | GO:0005622

Molecular Function

• structural constituent of ribosome (IEA) | GO:0003735

Biological Process

• translation (IEA) | GO:0006412

Domains

• ( PF00827 ) ribosomal L15

Gene Expression Profile

• Tetrahymena Functional Genomics Database: TTHERM_01289110

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
ParameciumDB	GSPATP00032549001	3.00148023798786e-60	Paramecium tetraurelia GSPATP0 0032549001 protein
ParameciumDB	GSPATP00016790001	3.00148023798786e-60	Paramecium tetraurelia GSPATP0 0016790001 protein
ParameciumDB	GSPATP00012048001	3.00148023798786e-60	Paramecium tetraurelia GSPATP0 0012048001 protein
ParameciumDB	GSPATP00033888001	3.00148023798786e-60	Paramecium tetraurelia GSPATP0 0033888001 protein
ToxoDB	42.m00111	7.00017671442579e-58	Toxoplasma gondii ribosomal pr otein L15, putative
TAIR	AT4G16720	9.00113158105093e-57	60S ribosomal protein L15 (RPL 15A)
IPI(HUMAN)	IPI:IPI00382749.1	1.00018013089414e-55	Tax_Id=9606 Ribosomal protein L15
PlasmoDB	PFD0770c	1.00018013089414e-55	Plasmodium falciparum PFD0770c
DictyBase	DDB0217404	9.99595103671115e-55	JC2V2_0_01443
DictyBase	DDB0202998	9.99595103671115e-55	rpl15 ribosomal protein L15
SGD	YLR029C	3.00068243969355e-51	RPL15A SGDID:S000004019, Chr X II from 202591-201977, reverse complement, Verified ORF, "Pr otein component of the large ( 60S) ribosomal subunit, nearly identical to Rpl15Bp and has similarity to rat L15 ribosoma l protein; binds to 5.8 S rRNA "
CryptoDB	EAK87374	6.99950717283637e-51	Cryptosporidium parvum (Iowa) protein EAK87374
WormBase	K11H12.2	5.99990773576909e-44	WBGene00004427 rpl-15 60S ribo somal protein L15

General Information

No Data fetched for General Information

Associated Literature

1. Ref:22052974: Klinge S, Voigts-Hoffmann F, Leibundgut M, Arpagaus S, Ban N (2011) Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6. Science (New York, N.Y.) 334(6058):941-8

Sequences

>TTHERM_01289110(protein)
MGAYKYLEELWRKKQSDLMSFILRLRTWEYRQLPVIHKASRSSRPDKARKLGYKNKDGYA
IWRVRVRRGGRKRPVSKGIVYGKPSSVGINQLKFARNLRSCAEERVGKRVPELRVLNSYW
VGQDGTYKFYEVILADPSHNAIRNDPRINWICESAHKHRELRGLTSAGRKGRGLRVKGHR
AKSLRTSRKGNWRARQMLKLRRYR

>TTHERM_01289110(coding)
ATGGGTGCCTACAAATATTTGGAAGAATTATGGAGAAAGAAGCAATCTGATCTCATGTCC
TTCATTTTGCGTCTTAGAACCTGGGAATACAGACAATTACCCGTCATCCACAAGGCTTCT
AGATCCTCCAGACCCGACAAGGCTAGAAAGTTGGGTTACAAGAACAAGGATGGTTACGCT
ATCTGGAGAGTCAGAGTCAGAAGAGGTGGTAGAAAGAGACCTGTCTCCAAGGGTATCGTT
TACGGTAAGCCCTCCAGTGTTGGTATCAACCAATTGAAGTTCGCCAGAAACCTCAGATCT
TGCGCTGAAGAAAGAGTCGGTAAGAGAGTCCCTGAATTAAGAGTCCTCAACTCTTACTGG
GTTGGTCAAGACGGTACCTACAAGTTCTACGAAGTTATCCTCGCTGATCCCTCTCACAAC
GCCATCAGAAACGACCCCAGAATCAACTGGATCTGTGAATCTGCTCACAAGCACAGAGAA
TTAAGAGGTCTTACCTCCGCTGGTAGAAAGGGTAGAGGTCTCAGAGTTAAGGGCCACAGA
GCTAAATCTCTCAGAACCTCCAGAAAGGGTAACTGGAGAGCTAGACAAATGCTCAAGCTC
AGAAGATACCGTTGA

>TTHERM_01289110(gene)
AAAAATCAAAAAAGAGTAAAATTAATTAAAAGTAAAAAGTAAAAGCAATTAGAAATGGGT
GCCTACAAATATTTGGAAGAATTATGGAGAAAGAAGCAATCTGATCTCATGTCCTTCATT
TTGCGTCTTAGAACCTGGGAATACAGACAATTACCCGTCATCCACAAGGCTTCTAGATCC
TCCAGACCCGACAAGGCTAGAAAGTTGGGTTACAAGAACAAGGATGGTTACGCTATCTGG
AGAGTCAGAGTCAGAAGAGGTGGTAGAAAGAGACCTGTCTCCAAGGGTATCGTTTACGGT
AAGCCCTCCAGTGTTGGTATCAACCAATTGAAGTTCGCCAGAAACCTCAGATCTTGCGCT
GAAGAAAGAGTCGGTAAGAGAGTCCCTGAATTAAGAGTCCTCAACTCTTACTGGGTTGGT
CAAGACGGTACCTACAAGTTCTACGAAGTTATCCTCGCTGATCCCTCTCACAACGCCATC
AGAAACGACCCCAGAATCAACTGGATCTGTGAATCTGCTCACAAGCACAGAGAATTAAGA
GGTAATTATCAAATTATTTAGCATTCTTAATAGAAAATTTTCTAGTTTTCATGATAGCTT
TGTTATTTATTCACTTGCTACTCGATTTAGATGCAAATCAATTTAAGTGGATGATAGTTA
ATTTGTTGATTTTAAAGAAAACACAAATTCTGAAAATAAACCTTAGCATGTGAATATAAA
ATGCAATTAAATTATTGTCCTAAGCATTTGAATTGCTTGATTAATGCTAATAAATTCACT
ATCTACTTTATATTAAGGGAGATTAGATTTGATATACTTGATAATTATACTATTTACTCA
ATTTTCCTTTTCGATCGATTGGTTTAGCTAACGATAATTTGCATGAATTTCTTTAATAAT
GAATTGATTCATTGATTGATTAAATACACATGAAATCATCAATATCTAAAGCATTGATAA
CCAAATGGAAAAAATTGAAGGATGTAGCATGAATAAAACAAAGCTAGATTGATAAACTTA
ATTTTAATAAAAAATTCATTTATTTATATTTAGTTTTAAAGTAAACTTGTTACTAATTAT
TTTTTTAACATTACAGGTCTTACCTCCGCTGGTAGAAAGGGTAGAGGTCTCAGAGTTAAG
GGCCACAGAGCTAAATCTCTCAGAACCTCCAGAAAGGGTAACTGGAGAGCTAGACAAATG
CTCAAGCTCAGAAGATACCGTTGAGCTGCTTGATAGTTTAACAACTTTCCAATACAATCA
ATACAAAACTGTTTATATACAATCAAAAATTAATATATATCACTTTATAACATGTAGGTT
AACATATTATCACTTATTTAAAATAACAACCCACTCAAAACCTTTCGCTCTCTATATATA
TACATACATACTTATTTTATTCTAAAATTATTCAAAATATCCT