TGD | Gene Details

Identifiers and Description

Gene Model Identifier
TTHERM_01049310

Standard Name
STD1 (Sugar Transport and Distribution)

Aliases
PreTt17689 | 211.m00057 | 3758.m00226

Description
major facilitator superfamily protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component
integral component of membrane (IEA) | GO:0016021
Molecular Function
transporter activity (IEA) | GO:0005215
Biological Process
transport (IEA) | GO:0006810

Domains

( TIGR01885 ) ornithine--oxo-acid transaminase

Gene Expression Profile

Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 13.6%

TetraMine Data

TTHERM_01049310

WebApollo

Fullscreen View

Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source Identifier Score Description

Tetrahymena borealis EI9_20454.1 9.997093137033517e-262 major facilitator superfamily
transporter protein (704 aa)

Oxytricha Contig12280.0.g23 9.99723014177113e-33 Sugar (and other) transporter

DictyBase DDB_G0278261 9.997019043202629e-21 DDB_G0278261 on chromosome: 3
position 577308 to 579437

WormBase WBGene00019979 2.0004286606204839e-16 status:Partially_confirmed U
niProt:O44616 protein_id:CCD
68888.1

Stentor Coeruleus SteCoe_4661 0.000000000000001713908431542013

SGD YDR497C 0.0000000006000548789370351 ITR1 Myo-inositol transporter
with strong similarity to the
minor myo-inositol transporter
Itr2p, member of the sugar tr
ansporter superfamily; express
ion is repressed by inositol a
nd choline via Opi1p and derep
ressed via Ino2p and Ino4p

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_20454.1	9.997093137033517e-262	major facilitator superfamily transporter protein (704 aa)
Oxytricha	Contig12280.0.g23	9.99723014177113e-33	Sugar (and other) transporter
DictyBase	DDB_G0278261	9.997019043202629e-21	DDB_G0278261 on chromosome: 3 position 577308 to 579437
WormBase	WBGene00019979	2.0004286606204839e-16	status:Partially_confirmed U niProt:O44616 protein_id:CCD 68888.1
Stentor Coeruleus	SteCoe_4661	0.000000000000001713908431542013
SGD	YDR497C	0.0000000006000548789370351	ITR1 Myo-inositol transporter with strong similarity to the minor myo-inositol transporter Itr2p, member of the sugar tr ansporter superfamily; express ion is repressed by inositol a nd choline via Opi1p and derep ressed via Ino2p and Ino4p

General Information

Paragraph No Gene Name Paragraph Text
44 STD1 Tetrahymena thermophila STD1 (Sugar Transport and Distribution) is homologous to proteins from the major facilitator/general substrate transporter superfamily of proteins. It contains a single domain (E-value = 9.6 * 10-42) categorized as “sugar_tr,” which is responsible for sugar and other solute transportation across a membrane. This implies that STD1 integral membrane protein may be involved in the transport of sugars across the T. thermophila membrane. Paragraph by Daivik Vyas and Katie Liu, Keck Science Department, Claremont McKenna College and Scripps College.

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_01049310(coding)
ATGACTGAAAATTGTCAAAATATTCCATCTCTTGCTGTAATAGATTTCTAATTAAACAAG
GACAAAGAAACTACTTCAGCTATCAACAACCAAAAGGATGAGCCTTAATAAGAAAAAATG
ATTTTAAATACCTTTAGATTTTGGTGTTTATTTTTCCATTCAAGCTGCTTTACTTTCTTC
TCTGGATATGTCACTGCAGAGTTCAACACTATGTTAAATCATCTACCACACATTTATGGC
TGGGATGATAGTGAAAAATCAATGTATAGCAACCTTTGCAACTCACTTCCTATGCTTGGA
GCTGCAAGTATAGCTTTTTGGAGTGGAGAGTTTGCTTAAAAATTCGGAAGAAGAAAATCC
CTTATGTTCTTTAGCGTTGTACTAATTATCGGTAGTATCTTGACACTATTTAGAAATACT
CCATTATTAATAATAGGAAGAATACTTCAAGGAAGTACTTTTGCCATATTTTCAACCGTC
TCACCTTTATATAGCCAGGAAGTCTTAGTTACTGAATATCGCGCTAAGAGTGGTACTTTA
ATTAGTGGATGTTAAGGTTTGGGAGTATTAACTGCATTTTTGATGGGATTTGGATTACCA
TCTGATCCTGCTGACACTGAAAATAAATTTTTCTATGTTCCATTGAGCTTACCTGCTATT
TTAATGGCCATTCATCTTCTTTTGTTCATATTTGTTTTCAAGGATGAGACACCAACTTTT
TACTTACTTTAAAAGAATGACTATTAAAGTGCTTAGAACTTCTTCTCAAAACTTTATGGT
TAATCTTATGTTGAAAGAGAAATGGAAGCTATTTCAGCAGTAAAGAAAGAAAATGAAGAA
GTCGATAAGTAAAAGAAAATTAGCTTTTGCGACTTATTCAATTAGAAATATAGATATAGA
ACTCTTCTTGCATTAGAATTAAATGTAACTTCGGTTTACACAGCAGTTTCGGTACTCTCT
GTTTATTCTACTTAAATATTTGAGAATAGTTATTCAACTAATGTAGCAACCATGTTTTCC
ATAGCAACTACTTTAGGAGATATACTATTACCTCCTCTATCTAACAAGATTATTAATTGG
TTTGGAAAAAAGAACTCTTGCATATATGGATGCTTTGGTCTGATTCTTTGTGAGTGTATT
TTTAGCGGTCTAGGATTTGCTGGACAAGAAAAGGCTATGGCTTTCTTCATTATTATTCAC
AGATTGGTTTTCTCTTTGACTGTTGGACCATTTAATTGGAGTTATCCATATGAGATATGT
CCTCCTGAAGGATTGGGAATATATATTATGCAGTTTTATGTCCTTATGTATATTAGTTTA
TACACTTTCCCTTTGCTAGTTTCATCATTTGGATTAGAAGCTGCATTTTTAGTTTATGCT
GGTATTATGCTAATTAGCACTCTAATTAATATGAAATATGTGCAACATATTGATAACTGC
ACTATTAAAGATATCTAAGATATGTTTGATTTACGTAAAATAAAAACACTAGTAAACTTA
AGCGACTATAATACTTCTCCTTCTCACAAAAGATTTAACCGTAGAAACATGTCTTCTAAA
CCACCAACGATTGTTTTAACTTCTCTTGCAAATATTAAAGACTGTGAAGATGGAGAAATG
CCAACCAATTCTAATAAATAAGCAACTGAATAAAATATAAATGGTGGAAGTCCAACAAAC
AAACTTCATAATTTTGAAAACAGCAATAACAGTAATACTGGTACTTTTATTTTTAGTAGC
TCTGGAAGCTAAGCTTACCTGAGCAATTCTCCTTTACGCTAGAGTCCATTAAAAAGAGGA
AGTAAAAAATAAAAATCTGCTATAATCATGTAAAAAGTAGTCAGCAACAAGCAAGATCTA
GAGGTAGTTTAAGAAGTAAATAATGAGTAATTAAATAACAAGCTGGATTAATCTTAACCA
GGCTAAACAAACAACAAATAAGAATAGTAATAAGAAGGTACAGTTTTCGATAACATAGCT
TAAGTAAGAAAAGTAAGCAAAACAATTAATATTCCTTAAACTTCAGATAGATAATAATAA
GATGCCATACAAGTTATATAATAATAAGGAGAAACTTCTACAAACTAAACTGATAAAATA
GTTAAATTTTAAGAATAATCATGA

>TTHERM_01049310(protein)
MTENCQNIPSLAVIDFQLNKDKETTSAINNQKDEPQQEKMILNTFRFWCLFFHSSCFTFF
SGYVTAEFNTMLNHLPHIYGWDDSEKSMYSNLCNSLPMLGAASIAFWSGEFAQKFGRRKS
LMFFSVVLIIGSILTLFRNTPLLIIGRILQGSTFAIFSTVSPLYSQEVLVTEYRAKSGTL
ISGCQGLGVLTAFLMGFGLPSDPADTENKFFYVPLSLPAILMAIHLLLFIFVFKDETPTF
YLLQKNDYQSAQNFFSKLYGQSYVEREMEAISAVKKENEEVDKQKKISFCDLFNQKYRYR
TLLALELNVTSVYTAVSVLSVYSTQIFENSYSTNVATMFSIATTLGDILLPPLSNKIINW
FGKKNSCIYGCFGLILCECIFSGLGFAGQEKAMAFFIIIHRLVFSLTVGPFNWSYPYEIC
PPEGLGIYIMQFYVLMYISLYTFPLLVSSFGLEAAFLVYAGIMLISTLINMKYVQHIDNC
TIKDIQDMFDLRKIKTLVNLSDYNTSPSHKRFNRRNMSSKPPTIVLTSLANIKDCEDGEM
PTNSNKQATEQNINGGSPTNKLHNFENSNNSNTGTFIFSSSGSQAYLSNSPLRQSPLKRG
SKKQKSAIIMQKVVSNKQDLEVVQEVNNEQLNNKLDQSQPGQTNNKQEQQQEGTVFDNIA
QVRKVSKTINIPQTSDRQQQDAIQVIQQQGETSTNQTDKIVKFQEQS

>TTHERM_01049310(gene)
ATGACTGAAAATTGTCAAAATATTCCATCTCTTGCTGTAATAGATTTCTAATTAAACAAG
GACAAAGAAACTACTTCAGCTATCAACAACCAAAAGGATGAGCCTTAATAAGAAAAAATG
ATTTTAAATACCTTTAGATTTTGGTGTTTATTTTTCCATTCAAGCTGCTTTACTTTCTTC
TCTGGATATGTCACTGCAGAGTTCAACACTATGTTAAATCATCTACCACACATTTATGGC
TGGGATGATAGTGAAAAATCAATGTATAGCAACCTTTGCAACTCACTTCCTATGCTTGGA
GCTGCAAGTATAGCTTTTTGGAGTGGAGAGTTTGCTTAAAAATTCGGAAGAAGAAAATCC
CTTATGTTCTTTAGCGTTGTACTAATTATCGGTAGTATCTTGACACTATTTAGAAATACT
CCATTATTAATAATAGGTATGCATGCATATTACATTCTATTCTATTTTTGATTACTTCAA
AATTTAATTAAATAAATAAAACAAAAAATCAAAATAAAAAAATGAATAAAAAAAATGGTA
TTAAAGAAAATTATTTTAATAAATAGGAAGAATACTTCAAGGAAGTACTTTTGCCATATT
TTCAACCGTCTCACCTTTATATAGCCAGGAAGTCTTAGTTACTGAATATCGCGCTAAGAG
TGGTACTTTAATTAGTGGATGTTAAGGTTTGGGAGTATTAACTGCATTTTTGATGGTAAA
TAATATTTTTTACATAAAAAGCTGTTTATTTATCTAATTAATTAATTATTTATATATTTA
TAATTAGGGATTTGGATTACCATCTGATCCTGCTGACACTGAAAATAAATTTTTCTATGT
TCCATTGAGCTTACCTGCTATTTTAATGGCCATTCATCTTCTTTTGTTCATATTTGTTTT
CAAGGATGAGACACCAACTTTTTACTTACTTTAAAAGAATGACTATTAAAGTGCTTAGAA
CTTCTTCTCAAAACTTTATGGTTAATCTTATGTTGAAAGAGAAATGGAAGCTATTTCAGC
AGTAAAGAAAGAAAATGAAGAAGTCGATAAGTAAAAGAAAATTAGCTTTTGCGACTTATT
CAATTAGAAATATAGATATAGAACTCTTCTTGCATTAGAATTAAATGTAACTTCGGTTTA
CACAGCAGTTTCGGTACTCTCTGTTTATTCTACTTAAATATTTGAGAATAGTTATTCAAC
TAATGTAGCAACCATGTTTTCCATAGCAACTACTTTAGGAGATATACTATTACCTCCTCT
ATCTAACAAGATTATTAATTGGTTTGGAAAAAAGAACTCTTGCATATATGGATGCTTTGG
TCTGATTCTTTGTGAGTGTATTTTTAGCGGTCTAGGATTTGCTGGACAAGAAAAGGCTAT
GGCTTTCTTCATTATTATTCACAGATTGGTTTTCTCTTTGACTGTTGGACCATTTAATTG
GAGTAACTTAACTTATATTTTTTGTTTTTACTATTTAAAGCAGAAAAAATATTTTGTCAT
TTTAATAGATTTAAAACATTTTTTAATTATAATTTAATTAATTTATAGGTTATCCATATG
AGATATGTCCTCCTGAAGGATTGGGAATATATATTATGCAGTTTTATGTCCTTATGTATA
TTAGTTTATACACTTTCCCTTTGCTAGTTTCATCATTTGGATTAGAAGCTGCATTTTTAG
TTTATGCTGGTATTATGCTAATTAGCACTCTAATTAATATGAAATATGTGCAACATATTG
ATAACTGCACTATTAAAGATATCTAAGATATGTTTGATTTACGTAAAATAAAAACACTAG
TAAACTTAAGCGACTATAATACTTCTCCTTCTCACAAAAGATTTAACCGTAGAAACATGT
CTTCTAAACCACCAACGATTGTTTTAACTTCTCTTGCAAATATTAAAGACTGTGAAGATG
GAGAAATGCCAACCAATTCTAATAAATAAGCAACTGAATAAAATATAAATGGTGGAAGTC
CAACAAACAAACTTCATAATTTTGAAAACAGCAATAACAGTAATACTGGTACTTTTATTT
TTAGTAGCTCTGGAAGCTAAGCTTACCTGAGCAATTCTCCTTTACGCTAGAGTCCATTAA
AAAGAGGAAGTAAAAAATAAAAATCTGCTATAATCATGTAAAAAGTAGTCAGCAACAAGC
AAGATCTAGAGGTAGTTTAAGAAGTAAATAATGAGTAATTAAATAACAAGCTGGATTAAT
CTTAACCAGGCTAAACAAACAACAAATAAGAATAGTAATAAGAAGGTACAGTTTTCGATA
ACATAGCTTAAGTAAGAAAAGTAAGCAAAACAATTAATATTCCTTAAACTTCAGATAGAT
AATAATAAGATGCCATACAAGTTATATAATAATAAGGAGAAACTTCTACAAACTAAACTG
ATAAAATAGTTAAATTTTAAGAATAATCATGA

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Identifiers and Description

Gene Model Identifier

Standard Name

Aliases

Description

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

Gene Expression Profile

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

TetraMine Data

WebApollo

Tetrahymena Stock Center

Homologs (v.2006 protein sequences)

General Information

Associated Literature

Sequences

Wiki Links

External Links

Paragraph No	Gene Name	Paragraph Text
44	STD1	Tetrahymena thermophila STD1 (Sugar Transport and Distribution) is homologous to proteins from the major facilitator/general substrate transporter superfamily of proteins. It contains a single domain (E-value = 9.6 * 10-42) categorized as “sugar_tr,” which is responsible for sugar and other solute transportation across a membrane. This implies that STD1 integral membrane protein may be involved in the transport of sugars across the T. thermophila membrane. Paragraph by Daivik Vyas and Katie Liu, Keck Science Department, Claremont McKenna College and Scripps College.