Identifiers and Description

Gene Model Identifier

TTHERM_00865240

Standard Name

None

Aliases

PreTt29154 | 154.m00112 | 3751.m00458

Description

DNA ligase I, ATP-dependent

Genome Browser

Gene Ontology Annotations

Molecular Function

• DNA binding (IEA) | GO:0003677
• ATP binding (IEA) | GO:0005524
• DNA ligase (ATP) activity (IEA) | GO:0003910

Biological Process

• DNA recombination (IEA) | GO:0006310
• DNA repair (IEA) | GO:0006281
• DNA replication (IEA) | GO:0006260

Domains

No Data fetched for Domains

Gene Expression Profile

• Tetrahymena Functional Genomics Database: TTHERM_00865240

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
TAIR	AT1G08130	1.99957647103994e-58	DNA ligase / polydeoxyribonucl eotide synthase (ATP)
IPI(HUMAN)	IPI:IPI00219841.6	2.99921413892506e-57	PROT:P18858|TREMBL:Q2TB12;Q32 P23;Q59HG7;Q76GR4|ENSEMBL:E NS P00000263274|REFSEQ:NP_000225| VEGA:OTTHUMP00000077187 Tax_Id =9606 DNA ligase 1
FlyBase	FBgn0034922	1.99923620009792e-56
ToxoDB	25.m01820	8.99586662241984e-56	Toxoplasma gondii DNA ligase 1 precursor, putative
PlasmoDB	MAL13P1.22	3.99954304031399e-55	Plasmodium falciparum 22
ParameciumDB	GSPATP00026707001	4.99871117732699e-55	Paramecium tetraurelia GSPATP0 0026707001 protein
CryptoDB	EAK88972	9.99595103671115e-55	Cryptosporidium parvum (Iowa) protein EAK88972
SGD	YDL164C	4.99786053911152e-53	CDC9 SGDID:S000002323, Chr IV from 167255-164988, reverse co mplement, Verified ORF, "DNA l igase found in the nucleus and mitochondria, an essential en zyme that joins Okazaki fragme nts during DNA replication; al so acts in nucleotide excision repair, base excision repair, and recombination"
DictyBase	DDB0232265	6.0015029449437e-53	lig1 DNA ligase I
DictyBase	DDB0167703	6.0015029449437e-53	lig1 DNA ligase I
WormBase	C29A12.3a	1.99938521878112e-51	WBGene00002985 lig-1 DNA ligas e I

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00865240(coding)
ATGATAAAGAAATTATTGTATTTACCCAAGTAAAGCTTGTTATCATCTTTGATTTTTTCT
AAGTTTTGTACTCAATTTAACTCCAAATCTATTTAGAGCTTTTATTTTTTGGCTAAATAG
TTTGACGATATCTCCAAAATATCTTCTAGAAATTCTGGAATAGAAGCTATAGAAACTTTG
ATGAATGATTACATTTAAGGAGGAGATAATGAACTATTTATCTAAATGGTACGCTTACTA
ACCTGCAAAGTAGATAGTGAAGAAATATAAATAGCTAATTCTTCCTTAGTTGAGATATTG
AAAGTTGTATATCCCTAAGAGGATATAACTAAATTCCTTTTTGAAAAAGGAGATATAGGA
TTGTATGCAAAAGAAATGCTTGAAAAAAAACTTGAAAAAGAAGGAAATAATCGAACTGAA
AAAAATCATTTAAGTATTTTAGAAGTTACGAGCTTTTTTGAAAAACTGAAGAATTTATAA
GGTGATCGCTCGAGACTTGAAAAGCAAGAACTTATCATAGATTTTTTGAAGAAAATCTAA
GATCCACTTGAAATATAATATTTTATCAGAATCCTTTCTAAAAGCCTAAGGATAGGTGTA
AGTGAGAAATCTATTATAAAAGCATTAACAAATATCAATAAAAAGAAGAAAAACTCTTTG
GATTCACTGCTTAAAAATGTTCAAGATAAAATATTTGGATATAATACTGCCTTACATACC
GATATTTAAATAGGAACTCCTGTGCCTCCAATGCTAGCCAAACCAGTTTCCGATTTTGAC
GAACTTTTAAAATTTTTAAAGAAGTACGAAAGTAAAAAAGTCTCTCTTGAACTAAAATAT
GATGGAGAGAGATGTTAGGTTCATTATGGTAAAAAGAAAGGAATTAAATTATTTAGTAGA
AATTTAGAAATCTAAAATGAGAAATATCCATAACTAGTTTAGCAATTAGAAAAATATTTT
TAGAAAAATAACAGTGTAGAAGATTGCATATTAGATGGAGAGATTGTTGTAACAGATTCT
AAAGGAAATATTAAATCATTTTAAGAACAACAACAAAATAGAAAAAGGAAATAAGATTCT
AACAAGGTAGTTGCTTTCGATGAAGATAATATTGAAAAGATTTACTTATTTGATATCCTG
TTTTTAAATGCATGTGAGCAAAATACCAAGGAATAACTTTACAGAAAGAGCTTGATTAAA
GAAAATTTTCCTATTGAAGGACCAGTTAATCACGCTGAATCAAAAATATTTGATCTTAGC
ATATAAAAAGATTTTGATGAGCTAAAAAAATTAGTAAAATAATATATTGATTAAAAAGAA
GAAGGTGCTATGGTTAAATCGCTTGATTCTAATACATTTTATGATAATAATGGAAGAACT
TAGTGGGCAAAATTAAAGAAGCAAGTTTTGTCAGGAGGTTTAGCTGATACATTTGATGTT
ATTCCTATTGCTGCATACTATGGAAAAGGCAAGAGATCTGGTGTCTATGGATCATATCTA
CTTGCTTGTTATGATGACAAAAAGAAAGAGTATGTGGCTTTGTGTAAGATAGGTACAGGT
TTTTCTGATCAATTTTTATAAGATTCAACGGATAGACTGAAATAAAAAGTATGCAGTTAA
AAACCTAAAGAATACTCTGTGCATAGAACTTTTAAGCCTGATGTTTGGTTTTAAAAAGAT
GCTGAAGTGTGGGAAGTAGAGAGTGATAGTCTTTCATCATCTCCTATTTATACAATAGGA
AAAATGAATTATAGTGATAATGGAATATCCCTTCGTTTCCCAAGATTCTTACGTGTAAGA
GATGATAAAACTACTGAACAATCAACAAAAACATATTAAAATAATTCAAAAGATTAAAAA
GGAGACCATGGAGATAAAGGAGAAGAAGAAGAAGAAGGAGATAAGTGA

>TTHERM_00865240(protein)
MIKKLLYLPKQSLLSSLIFSKFCTQFNSKSIQSFYFLAKQFDDISKISSRNSGIEAIETL
MNDYIQGGDNELFIQMVRLLTCKVDSEEIQIANSSLVEILKVVYPQEDITKFLFEKGDIG
LYAKEMLEKKLEKEGNNRTEKNHLSILEVTSFFEKLKNLQGDRSRLEKQELIIDFLKKIQ
DPLEIQYFIRILSKSLRIGVSEKSIIKALTNINKKKKNSLDSLLKNVQDKIFGYNTALHT
DIQIGTPVPPMLAKPVSDFDELLKFLKKYESKKVSLELKYDGERCQVHYGKKKGIKLFSR
NLEIQNEKYPQLVQQLEKYFQKNNSVEDCILDGEIVVTDSKGNIKSFQEQQQNRKRKQDS
NKVVAFDEDNIEKIYLFDILFLNACEQNTKEQLYRKSLIKENFPIEGPVNHAESKIFDLS
IQKDFDELKKLVKQYIDQKEEGAMVKSLDSNTFYDNNGRTQWAKLKKQVLSGGLADTFDV
IPIAAYYGKGKRSGVYGSYLLACYDDKKKEYVALCKIGTGFSDQFLQDSTDRLKQKVCSQ
KPKEYSVHRTFKPDVWFQKDAEVWEVESDSLSSSPIYTIGKMNYSDNGISLRFPRFLRVR
DDKTTEQSTKTYQNNSKDQKGDHGDKGEEEEEGDK

>TTHERM_00865240(gene)
ATGATAAAGAAATTATTGTATTTACCCAAGTAAAGCTTGTTATCATCTTTGATTTTTTCT
AAGTTTTGTACTCAATTTAACTCCAAATCTATTTAGAGCTTTTATTTTTTGGCTAAATAG
TTTGACGATATCTCCAAAATATCTTCTAGAAATTCTGGAATAGAAGCTATAGAAACTTTG
ATGAATGATTACATTTAAGGAGGAGATAATGAAGTAAATAAAACCAATTAAAATTGTAAC
TAAACATTCAAAATATTAACTAGCTATTTATCTAAATGGTACGCTTACTAACCTGCAAAG
TAGATAGTGAAGAAATATAAATAGCTAATTCTTCCTTAGTTGAGATATTGAAAGTTGTAT
ATCCCTAAGAGGATATAACTAAATTCCTTTTTGAAAAAGGAGATATAGGATTGTATGCAA
AAGAAATGCTTGAAAAAAAACTTGAAAAAGAAGGAAATAATCGAACTGAAAAAAATCATT
TAAGTATTTTAGAAGTTACGAGCTTTTTTGAAAAACTGAAGAATTTATAAGGTGATCGCT
CGAGACTTGAAAAGCAAGAACTTATCATAGATTTTTTGAAGAAAATCTAAGATCCACTTG
AAATATAATATTTTATCAGAATCCTTTCTGTAAATTTTTGTTGAAATTAAATGTAAAAAG
TAAATAATTTATATCTTAGAAAAGCCTAAGGATAGGTGTAAGTGAGAAATCTATTATAAA
AGCATTAACAAATATCAATAAAAAGAAGAAAAACTCTTTGGATTCACTGCTTAAAAATGT
TCAAGATAAAATATTTGGATATAATACTGCCTTACATACCGATATTTAAATAGGAACTCC
TGTGCCTCCAATGCTAGCCAAACCAGTTTCCGATTTTGACGAACTTTTAAAATTTTTAAA
GAAGTACGAAAGTAAAAAAGTCTCTCTTGAACTAAAATATGATGGAGAGAGATGTTAGGT
AAATATTAAGATAAAATAAGAGTTAATGTTTTTACTTTTAAATAAAAGGTTCATTATGGT
AAAAAGAAAGGAATTAAATTATTTAGTAGAAATTTAGAAATCTAAAATGAGAAATATCCA
TAACTAGTTTAGCAATTAGAAAAATATTTTTAGAAAAATAACAGTGTAGAAGATTGCATA
TTAGATGGAGAGATTGTTGTAACAGATTCTAAAGGAAATATTAAATCATTTTAAGAACAA
CAACAAAATAGAAAAAGGAAATAAGATTCTAACAAGGTAGTTGCTTTCGATGAAGATGTA
ATTTTAATCCTTAAATATAAAAAATTGTCTAAATTTTTAATTAAAATAAATGTTAGAATA
TTGAAAAGATTTACTTATTTGATATCCTGTTTTTAAATGCATGTGAGCAAAATACCAAGG
AATAACTTTACAGAAAGAGCTTGATTAAAGAAAATTTTCCTATTGAAGGACCAGTTAATC
ACGCTGAATCAAAAATATTTGATCTTAGCATATAAAAAGATTTTGATGAGCTAAAAAAAT
TAGTAAAATAATATATTGATTAAAAAGAAGAAGGTGCTATGGTTAAATCGCTTGATTCTA
ATACATTTTATGATAATAATGGAAGAACTTAGTGGGCAAAATTAAAGAAGCAAGTTTTGT
CAGGAGGTTTAGCTGATACATTTGATGTTATTCCTATTGCTGCATACTATGGAAAAGGCA
AGAGGTAATAATTAGTTAGCTAATTTTATAATTCTAGAAAAAATTAACTTAATAAAAATA
AATAAGATCTGGTGTCTATGGATCATATCTACTTGCTTGTTATGATGACAAAAAGAAAGA
GTATGTGGCTTTGTGTAAGATAGGTACAGGTTTTTCTGATCAATTTTTATAAGATTCAAC
GGATAGACTGAAATAAAAAGTATGCAGTTAAAAACCTAAAGAATACTCTGTGCATAGAAC
TTTTAAGCCTGATGTTTGGTTTTAAAAAGATGCTGAAGTGTGGGAAGTAGAGAGTGATAG
TCTTTCATCATCTCCTATTTATACAATAGGAAAAATGAATTATAGTGATAATGGAATATC
CCTTCGTTTCCCAAGATTCTTACGTGTAAGAGATGATAAAACTACTGAACAATCAACAAA
AACATATTAAGTATATTTAAATTATTAAATTAAAATAAAAAAATTAAAATCTATTAATTT
AATTTAAAAAAGATTATTGAGTTCTACAATAAATAATAAGCAAAACCAAATGTAATTAAT
TCATTTTTGAGTTAAAATAATACCTAACAAATTTATTCACATTATTTTTTAGAATAATTC
AAAAGATTAAAAAGGAGACCATGGAGATAAAGGAGAAGAAGAAGAAGAAGGAGATAAGTG
A