Identifiers and Description

Gene Model Identifier

TTHERM_00689830

Standard Name

None

Aliases

PreTt23179 | 105.m00146 | 3737.m00058

Description

tRNA modification GTPase MnmE; small GTP-binding protein domain containing protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• intracellular (IEA) | GO:0005622

Molecular Function

• 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (IEA) | GO:0046429
• GTP binding (IEA) | GO:0005525

Biological Process

• terpenoid biosynthetic process (IEA) | GO:0016114
• oxidation-reduction process (IEA) | GO:0055114

Domains

• ( PF00071 ) Ras family
• ( PF00350 ) Dynamin family
• ( PF08477 ) Miro-like protein
• ( TIGR00436 ) GTP-binding protein Era
• ( PF01926 ) GTPase of unknown function
• ( TIGR03156 ) GTP-binding protein HflX
• ( PF00025 ) ADP-ribosylation factor family
• ( TIGR00450 ) tRNA modification GTPase TrmE
• ( TIGR00231 ) small GTP-binding protein domain
• ( PF08946 ) Osmosensory transporter coiled coil
• ( PF00009 ) Elongation factor Tu GTP binding
• ( TIGR00650 ) GTP-binding conserved hypothetical protein

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.5%

TetraMine Data

TTHERM_00689830

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_16631.1	3.0009023271667765e-140	small GTP-binding protein doma in-containing protein (290 aa)
Oxytricha	Contig18025.0.g11	6.000414531663983e-92	GTP-binding protein TrmE N-ter minus
DictyBase	DDB_G0270228	3.000074895537278e-78	gtpbp3 on chromosome: 1 positi on 4442110 to 4443725
SGD	YMR023C	4.001670058321624e-73	MSS1 Mitochondrial protein, fo rms a heterodimer complex with Mto1p that performs the 5-car boxymethylaminomethyl modifica tion of the wobble uridine bas e in mitochondrial tRNAs; simi lar to human GTPBP3
WormBase	WBGene00009557	8.998068369452149e-53	status:Confirmed UniProt:Q9X TZ1 protein_id:CAB07393.1

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00689830(coding)
ATGAATCTACTTAAATATAATAAACTTCAATTTATTTCTAGATATTAATTTTGCTCTACA
AATATTCATTTTTCTGATAATATTTACGCTATAGCTTCAGGAAATGTTAAAGCAGGTGTT
TCAATTATTAGGATAAGCGGGTCTAATTGCTTACAAGCAGGATAGATGCTTGTTTAAAAT
GCATAGCAAAGATAGCTTATAAAAGGGATGAACAATTCTTAAGTATAGGACTATCTTAAT
CTCAAAAATAGATATGCTCATTTTAAAAAATTATATTCTTTGATAGACCCTACAGTTTCT
CCTCAAAACCAATCTTTTCAAAAACAGGATTTAATTTACTAATAAATCGATTAAGGAATT
TTCATGTACTTTTAAGGGCCAAAGAGCTACACTGGAGAAGATATTGTTGAAATGCATATT
CATGGCAGTAGAGCATTATAAAAGAAAGTACTTTTAGAACTTTCTTAGCTTAATAATTTC
AGATTGGCAGATCCAGGAGAGTTCACAAAGAGAGCAATGATAAATAATAAATTAGACTTG
CTTGAAGTAGAGGGGCTTGCTGACCTTCTAAATTCAGAAACAGAGAGTTAAAGAGTTTAG
TCAACTCAATAGTTTCTAGGAAAGTCTAGTTAAATTTTAGAAGATTGGAGGTTTTAGCTT
ATTCGTGCATTAGCCCATGCAGAAGCATTTATTGATTTCGAGTCAGATTAGGATGATGTC
GAATTTAACATCTTAGGTAAAACTTAAGAAAATGTATAATAAGTTATTAAGGATATAAAT
GAGTAGCTTAGTGATAGAAATAGAGGAGAAATATTAAGAGATGGAATGAAGATTTCAATT
ATAGGTAAGCCTAATGCTGGAAAGAGCACTCTGCTCAATTGTCTAGCAAAAAAAGATATA
GCTATTGTAAGTGAAATTCCTGGCACTACTCGTGATGCACTGTCAGTTTCTTTGAATATT
TCTGGTTTTCCAATACTTCTTTATGACACTGCAGGAATTAGGTAGACTAAAGATGTAATT
GAAGAAAAAGGTGTCAATAAAGCTCTATAACATGCTAGAGAGTCAGATTTAAATATTTGG
ATAATTGATATAGATGATGTAATAAAACAAGCGGATGGGTCGTATATTGTTTAAGACATC
AAAGAGATATCAGAAATATTAGAATCAAATTAGAATACTCTTATATTTATAAATAAAATT
GATAAAGTCAACTCATAAAAAGAAATAACTGACATTACAATAAGAGATAAAAAATTTAAA
ATAGATGGATAAATATCAGCACAACATAATTAAAACATAAACTCCCTATTAGATAAATTA
ACTAAAAAAATTAATGAGAGATTAGATATCACTGATGGAATAATGAGCAGTGGGACTATA
TCAATTATAACTTAAACAAGACACAGATTAGAATTACAAAAATGTTTAGAACACCTGGAA
ATTTTCTCAAGAAATAAGCAAAACTTACCAGTTGATATTGTGTGTGAAGAATTAAGATAA
GCAGTTAATTGTATAGGAAGAATAACTGGTAGAGTGGATGTTGAAGAAGTTTTAGATGTA
CTCTTTTCAGAATTTTGTATTGGAAAGTGA

>TTHERM_00689830(protein)
MNLLKYNKLQFISRYQFCSTNIHFSDNIYAIASGNVKAGVSIIRISGSNCLQAGQMLVQN
AQQRQLIKGMNNSQVQDYLNLKNRYAHFKKLYSLIDPTVSPQNQSFQKQDLIYQQIDQGI
FMYFQGPKSYTGEDIVEMHIHGSRALQKKVLLELSQLNNFRLADPGEFTKRAMINNKLDL
LEVEGLADLLNSETESQRVQSTQQFLGKSSQILEDWRFQLIRALAHAEAFIDFESDQDDV
EFNILGKTQENVQQVIKDINEQLSDRNRGEILRDGMKISIIGKPNAGKSTLLNCLAKKDI
AIVSEIPGTTRDALSVSLNISGFPILLYDTAGIRQTKDVIEEKGVNKALQHARESDLNIW
IIDIDDVIKQADGSYIVQDIKEISEILESNQNTLIFINKIDKVNSQKEITDITIRDKKFK
IDGQISAQHNQNINSLLDKLTKKINERLDITDGIMSSGTISIITQTRHRLELQKCLEHLE
IFSRNKQNLPVDIVCEELRQAVNCIGRITGRVDVEEVLDVLFSEFCIGK

>TTHERM_00689830(gene)
ATGAATCTACTTAAATATAATAAACTTCAATTTATTTCTAGATATTAATTTTGCTCTACA
AATATTCATTTTTCTGATAATATTTACGCTATAGCTTCAGGAAATGTTAAAGCAGGTGTT
TCAGTAATCATATTTAGTTTTATTTTTCGCAAATTATAATTTAGATTATTTGTAGATTAT
TAGGATAAGCGGGTCTAATTGCTTACAAGCAGGATAGATGCTTGTTTAAAATGCATAGCA
AAGATAGCTTATAAAAGGGATGAACAATTCTTAAGTATAGGACTATCTTAATCTCAAAAA
TAGATATGCTCATTTTAAAAAATTATATTCTTTGATAGACCCTACAGTTTCTCCTCAAAA
CCAATCTTTTCAAAAACAGGATTTAATTTACTAATAAATCGATTAAGGAATTTTCATGTA
CTTTTAAGGGCCAAAGAGCTACACTGGAGAAGGTAGCTAACTTTTCATATTATATTAAAA
ATTAAGAAAAATTAATTTAAAAAAGATATTGTTGAAATGCATATTCATGGCAGTAGAGCA
TTATAAAAGAAAGTACTTTTAGAACTTTCTTAGCTTAATAATTTCAGATTGGCAGATCCA
GTAAATCAAAATTATAATATTAATTGATATCAATTTTTATTTTTTTTTAAAGGGAGAGTT
CACAAAGAGAGCAATGATAAATAATAAATTAGACTTGCTTGAAGTAGAGGGGCTTGCTGA
CCTTCTAAATTCAGAAACAGAGAGTTAAAGAGTTTAGTCAACTCAATAGTTTCTAGGAAA
GTCTAGTTAAATTTTAGAAGATTGGAGGTTTTAGCTTATTCGTGCATTAGCCCATGCAGA
AGCATTTATTGATTTCGAGTCAGATTAGGTAAAATGAAAATAATTTTGAATAGATTATTG
AATTAATTAAAAAAAATAAATTCAGGATGATGTCGAATTTAACATCTTAGGTAAAACTTA
AGAAAATGTATAATAAGTTATTAAGGATATAAATGAGTAGCTTAGTGATAGAAATAGAGG
AGAAATATTAAGAGATGGAATGAAGATTTCAATTATAGTAATTATTCATTTTTGAAGGTT
TTTATTTTTTATAATATTTTAAAATTAATTATTTTTAAGGGTAAGCCTAATGCTGGAAAG
AGCACTCTGCTCAATTGTCTAGCAAAAAAAGATATAGCTATTGTAAGTGAAATTCCTGGC
ACTACTCGTGATGCACTGTCAGTTTCTTTGAATATTTCTGGTTTTCCAATACTTCTTTAT
GACACTGCAGGAATTAGGTAGACTAAAGATGTAATTGAAGAAAAAGGTGTCAATAAAGCT
CTGTAAAATATTCAAGTATTAAAATAAATAATAAAATTAAAACTTTAATTTGGTAAAATA
AAAAGATAACATGCTAGAGAGTCAGATTTAAATATTTGGATAATTGATATAGATGATGTA
ATAAAACAAGCGGATGGGTCGTATATTGTTTAAGACATCAAAGAGATATCAGAAATATTA
GAATCAAATTAGAATACTCTTATATTTATAAATAAAATTGATAAAGTCAACTCATAAAAA
GAAATAACTGACATTACAATAAGAGATAAAAAATTTAAAATAGATGGATAAATATCAGCA
CAACATAATTAAAACATAAACTCCCTATTAGATAAATTAACTAAAAAAATTAATGAGAGA
TTAGATATCACTGATGGAATAATGAGCAGTGGGACTATATCAATTATAACTTAAACAAGA
CACAGATTAGAATTACAAAAATGTTTAGAACACCTGGAAATTTTCTCAAGAAATAAGCAA
AACTTACCAGTTGATATTGTGTGTGAAGAATTAAGATAAGCAGTTAATTGTATAGGAAGA
ATAACTGGTAGAGTGGATGTTGAAGAAGTTTTAGATGTACTCTTTTCAGAATTTTGTATT
GGAAAGTGA