Identifiers and Description

Gene Model Identifier

TTHERM_00467790

Standard Name

GTP2 (GTPase 2)

Aliases

PreTt18681 | 55.m00236 | RAB2A | 3710.m00085

Description

Similar to Rab2; putative intermediate compartment protein; putative involvement in regulated secretion

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• intracellular (IEA) | GO:0005622

Molecular Function

• GTP binding (IEA) | GO:0005525

Biological Process

• small GTPase mediated signal transduction (IEA) | GO:0007264

Domains

• ( PF00071 ) Ras family
• ( PF08477 ) Miro-like protein
• ( PF01926 ) GTPase of unknown function
• ( PF00025 ) ADP-ribosylation factor family
• ( TIGR00231 ) small GTP-binding protein domain
• ( PF00009 ) Elongation factor Tu GTP binding

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 12.4%

TetraMine Data

TTHERM_00467790

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_15714.1	3.001476460448119e-154	Ras family protein (212 aa)
Oxytricha	Contig22591.0.g112	2.000234809436283e-103	Ras family
WormBase	WBGene00006833	2.9999146385131704e-95	locus:unc-108 status:Confirm ed UniProt:O01577 protein_ id:CCD66422.1
DictyBase	DDB_G0292268	6.997716170296885e-95	rab2A on chromosome: 6 positio n 1422661 to 1423817
SGD	YER031C	2.0008958828286524e-54	YPT31 Rab family GTPase, very similar to Ypt32p; involved in the exocytic pathway; mediate s intra-Golgi traffic or the b udding of post-Golgi vesicles from the trans-Golgi
Stentor Coeruleus	SteCoe_11568	7.47197233734299e-43

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00467790(coding)
ATGAGTTACGCCTATCTTTTTAAGTATATTATCATCGGTGATACTGGTGTCGGTAAAAGT
TGCATCCTCTCTCAATTCATAGATAAGAGATTCAAAGAAAAGCACGATGTAACTATCGGT
GTCGAGTTTGGTGCAAGAATGATTAGTTTTGATAATAAAAATATTAAGCTTTAGATTTGG
GATACAGCTGGTTAAGAATCCTTTAGATCAATTACTCGTTCATATTATAGATCAGCAGCT
GGAGCTCTTTTAGTTTACGATATTACTAAGCGTGAGAGTTTCTAACATCTTGGCAGATGG
CTTGAAGAAGCTAGATAAAACGGAAACCCATAAATGAGTTTTATTTTAGTTGGTAACAAG
TGCGATTTGGAATAAGATCGTCAAGTAAGCTATGAAGAAGGTGAAAAGTTTGCCAAAGAG
CATGATCTTGTTTATTTAGAAGTAAGTGCTAAAACCGCATATAATGTTGAAGAAGCCTTC
AAATAAACAGCAAAAATGATCTATGAAAAGATTAATCAAGGCTTAATAGATCCTAACATC
GAGACTTTTGGAGTAAAGGTTGGAACTGAATAAAATACTATGACTTTATCAGCAAAAACA
AAGCCAACACCTCCAGCATCTAATGGCTGTTGTTGA

>TTHERM_00467790(protein)
MSYAYLFKYIIIGDTGVGKSCILSQFIDKRFKEKHDVTIGVEFGARMISFDNKNIKLQIW
DTAGQESFRSITRSYYRSAAGALLVYDITKRESFQHLGRWLEEARQNGNPQMSFILVGNK
CDLEQDRQVSYEEGEKFAKEHDLVYLEVSAKTAYNVEEAFKQTAKMIYEKINQGLIDPNI
ETFGVKVGTEQNTMTLSAKTKPTPPASNGCC

>TTHERM_00467790(gene)
ATGAGTTACGCCTATCTTTTTAAGTATATTATCATCGGTGATACTGGTATGTTTAAAGAA
ATTATTTAATCTTGCCTTTATGACATTTTATTTTTATTAAAAAAGGTGTCGGTAAAAGTT
GCATCCTCTCTCAATTCATAGATAAGAGATTCAAAGAAAAGCACGATGTAACTATCGGTG
TCGAGTTTGGTGCAAGAATGATTAGTTTTGATAATAAAAATATTAAGCTTTAGATTTGGG
ATACAGTAATTAATTATATTTTACAAATAACACTTTACCTCCTCTTTGAAGGATCACTAA
ATAGTTATTTCTTAAGCTATAAAATAAAATAAATTGATTAGATTTTTGATTATTTTTTCA
AACATAAAAATAATTTAAAATACTTTAAAACAATTAGGCTGGTTAAGAATCCTTTAGATC
AATTACTCGTTCATATTATAGATCAGCAGCTGGAGCTCTTTTAGTTTACGATATTACTAA
GTAAAACAATTTTATCAATGTATTGACTAAATTTAAGTTAATTTTTTGTTGAAAAGGCGT
GAGAGTTTCTAACATCTTGGCAGATGGCTTGAAGAAGCTAGATAAAACGGAAACCCATAA
ATGAGTTTTATTTTAGTTGGTAACAAGTGCGATTTGGAATAAGAGTAAATTTTTATTGTT
AGATTGCTTTTAAAATTTTTACAATTTACTTTATCTGTGAAGCAAATTAAAAAATGTGTG
TGAGATGATTTCAATACACTTTGATTATAACTTTTATGAAGAAGAGAAAGATTTAAATAA
CATTTATAATTTTATAAATAGTCGTCAAGTAAGCTATGAAGAAGGTGAAAAGTTTGCCAA
AGAGCATGATCTTGTTTATTTAGAAGTAAGTGCTAAAACCGCATATAATGTTGAAGAAGC
CTTCAAATAAACAGCAAAAATGATCTATGAAAAGATTAATCAAGGCTTAATAGATCCTAA
CATCGAGGTAATATTAAATTTATTTTTTACTATTAAAATAACTAAAAGTTTCCTATTTAA
AATTAATATAAATAGACTTTTGGAGTAAAGGTTGGAACTGAATAAAATACTATGACTTTA
TCAGCAAAAACAAAGCCAACACCTCCAGCATCTAATGGCTGTTGTTGA