Identifiers and Description

Gene Model Identifier

TTHERM_000354599

Standard Name

CROP1 (Ciliary Row Organizing Protein 1)

Aliases

None

Description

Sf-assemblin microtubule associated structural protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• microtubule associated complex (IDA) | GO:0005875 | Ref:SUPR000317
• cytoplasmic microtubule (IDA) | GO:0005881 | Ref:SUPR000317
• cell cortex (IDA) | GO:0005938 | Ref:SUPR000317

Domains

No Data fetched for Domains

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.5%

TetraMine Data

TTHERM_000354599

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_02355.1	9.996360612176328e-173	hypothetical protein (266 aa)
Oxytricha	Contig21276.0.g90	9.99893167504554e-35	SF-assemblin/beta giardin
Stentor Coeruleus	SteCoe_29001	6.305116760146989e-16

General Information

Paragraph No	Gene Name	Paragraph Text
106	CROP1	The IQ-calmodulin motif information given in Gene Browser is based on old information. Recent studies have shown an sf-assemblin domain associated with microtubule structure.

Associated Literature

1. Ref:SUPR000317

Sequences

>TTHERM_000354599(coding)
ATGTTCTCTCAAACAACTCCTTTTAGAAGAAATTTCGAAAGCCCCGCTAGAGATATCTAC
ACATCGCCTAATCTATCTAAAATAGCTTAATTAAATGAAAGAGTTAAAACTATCCAAACC
AATTTTGAGGAATCTAGAGCTGCCAAAAGAGAAGTATTTTAAAACAAGATGAGATATGTA
GATGATAGAATAAATAAAGTTGAATAATAAAATGATTAAAAGTTTAGATTGCTTGCTGAA
TAGTTGAATAAGATATAAGAAGAAGCTAACTAAGAAACATTGGCTAAAGAAATTCATTCT
GAAAAAAGATTAAAGGAAATTAAGTTGCTGGACAAAAATTTTTCAATCAACATTAGCAAA
GAGCATTAAGAAAAAAAAGAAAATGAAACTAAAATGTTGAGATAAATTGATGAAAAGATA
TAAGAAATGAAGATTGAGCTTTTCCGTGACAGAAAGAAAAGAGAAGATTACGAAGTTTAT
AAGACCAGCGAAATAGAAAATAGAGTTAACGATCTTAGAGAACAATTTGAATAAGAAAAA
AAAATTAGAGATGAAGTATCAGAAAATCTTATTAAAACTTTTGGAGAAGAGATTTTAAAA
TTTTAGGATCTTCTTAGATAAGAAAAGAAAATCAGAGAAGAATAACACAACAATATGCTT
AAAGTTTTAGAAGACTTGAATGATTCTTTAACTTCAGAAGTTACTTAAGAAAAACACATT
AGAGAAAAGTCAGAAGAAATGTTGCTTAAGTTATTAGAAGATACTTGTTAAAAGATTGAA
TCATCTCTTTTGAATTGA

>TTHERM_000354599(protein)
MFSQTTPFRRNFESPARDIYTSPNLSKIAQLNERVKTIQTNFEESRAAKREVFQNKMRYV
DDRINKVEQQNDQKFRLLAEQLNKIQEEANQETLAKEIHSEKRLKEIKLLDKNFSINISK
EHQEKKENETKMLRQIDEKIQEMKIELFRDRKKREDYEVYKTSEIENRVNDLREQFEQEK
KIRDEVSENLIKTFGEEILKFQDLLRQEKKIREEQHNNMLKVLEDLNDSLTSEVTQEKHI
REKSEEMLLKLLEDTCQKIESSLLN

>TTHERM_000354599(gene)
AAAAAGCATAAAAAACAAACAAAAAATAATAATAAATAAATAAATAATTATTTAATAAAA
TAAGTATCTTTTTTCATTATTGTCCAAACAAAATATATTTTAATTAAAAGACAAATTATA
AAAGTAATGTTCTCTCAAACAACTCCTTTTAGAAGAAATTTCGAAAGCCCCGCTAGAGAT
ATCTACAGTAATATTTATATTTAATTCTAGCAAATATATTATTTTAAAAATAACTTTAAT
TTGATTATTTTTATTATGATTATCTTAAAAGCATCGCCTAATCTATCTAAAATAGCTTAA
TTAAATGAAAGAGTTAAAACTATCCAAACCAATTTTGAGGAATCTAGAGCTGTATTTCAT
TTAGATATTTATTGATAAGCTGCCTATTTATTTATATTTTAGCAGCCATTGCACAATTTA
TCACAATTAAAATGGATTCTATAAAATAGGCCAAAAGAGAAGTATTTTAAAACAAGATGA
GATATGTAGATGATAGAATAAATAAAGTTGAATAATAAAATGATTAAAAGTTTAGAGTAA
ATAATTTTATTTAGAATACTCTTTATCTAATTAATTTTGAAAATTAATTTAGTTGCTTGC
TGAATAGTTGAATAAGATATAAGAAGAAGCTAACTAAGAAACATTGGCTAAAGAAGTAAT
AAAAATTATTTAAAGAATTTTGAGAATAAAAAAATAAATAAAGTATTTAGTTGACTAAAT
ACTTTGAAATAGGCTTATAAAATTGAATAATTCTTTGTAAGAAGCTGTAAATGTATTTTA
AATTATTTATATTATAAATTAGATTCATTCTGAAAAAAGATTAAAGGAAATTAAGTTGCT
GGACAAAAATTTTTCAATCAACATTAGCAAAGAGCATTAAGAAAAAAAAGAAAATGAAAC
TAAAATGTTGAGATAAATTGATGAAAAGATATAAGAAATGAAGATTGAGCTTTTCCGTGA
CAGAAAGAAAAGAGAAGATTACGAAGTTTATAAGACCAGCGAAATAGAAAATAGAGTTAA
CGATCTTAGAGAACAATTTGAATAAGAAAAAAAAATTAGGTAAAAAGCTGTTAAAGCATT
AATTAATTAATTAATTATTAGTATTGATTGTATTTATTAAATAAATAAATAAAACCAAAA
TAAAATTTATTAATTGCAAATAGATTAAATGCAACTCATTCATTATTTAAATTCATCAAC
ATAAGTTGATGAAATTATGAAATGCAATTCATATATTAATCTGTACTATGGTTTTATATA
AAAAAAAGAGATGAAGTATCAGAAAATCTTATTAAAACTTTTGGAGAAGAGATTTTAAAA
TTTTAGGATCTTCTTAGATAAGAAAAGAAAATCAGAGAAGAATAACACAACAATATGCTT
AAAGTTTTAGAAGACTTGAATGATTCTTTAACTTCAGAAGTTACTGTAAGAAAAAATATT
TTGTATTTTTTGCTAAAATTAATGAATTTCAATAAATAAATAGTAAGAAAAACACATTAG
AGAAAAGTCAGAAGAAATGTTGCTTAAGTTATTAGAAGATACTTGTTAAAAGATTGAATC
ATCTCTTTTGAATTGA