Identifiers and Description
Gene Model Identifier
TTHERM_000354599Standard Name
CROP1 (Ciliary Row Organizing Protein 1)Aliases
NoneDescription
Sf-assemblin microtubule associated structural proteinGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- cytoplasmic microtubule (IDA) | GO:0005881 | Ref:SUPR000317
- cell cortex (IDA) | GO:0005938 | Ref:SUPR000317
- microtubule associated complex (IDA) | GO:0005875 | Ref:SUPR000317
Domains
No Data fetched for Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.5%
TetraMine Data
TTHERM_000354599
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_02355.1 9.996360612176328e-173 hypothetical protein (266 aa)
Oxytricha Contig21276.0.g90 9.99893167504554e-35 SF-assemblin/beta giardin
Stentor Coeruleus SteCoe_29001 6.305116760146989e-16
General Information
Paragraph No Gene Name Paragraph Text 106 CROP1 The IQ-calmodulin motif information given in Gene Browser is based on old information. Recent studies have shown an sf-assemblin domain associated with microtubule structure.
Associated Literature
Sequences
>TTHERM_000354599(coding)
ATGTTCTCTCAAACAACTCCTTTTAGAAGAAATTTCGAAAGCCCCGCTAGAGATATCTAC
ACATCGCCTAATCTATCTAAAATAGCTTAATTAAATGAAAGAGTTAAAACTATCCAAACC
AATTTTGAGGAATCTAGAGCTGCCAAAAGAGAAGTATTTTAAAACAAGATGAGATATGTA
GATGATAGAATAAATAAAGTTGAATAATAAAATGATTAAAAGTTTAGATTGCTTGCTGAA
TAGTTGAATAAGATATAAGAAGAAGCTAACTAAGAAACATTGGCTAAAGAAATTCATTCT
GAAAAAAGATTAAAGGAAATTAAGTTGCTGGACAAAAATTTTTCAATCAACATTAGCAAA
GAGCATTAAGAAAAAAAAGAAAATGAAACTAAAATGTTGAGATAAATTGATGAAAAGATA
TAAGAAATGAAGATTGAGCTTTTCCGTGACAGAAAGAAAAGAGAAGATTACGAAGTTTAT
AAGACCAGCGAAATAGAAAATAGAGTTAACGATCTTAGAGAACAATTTGAATAAGAAAAA
AAAATTAGAGATGAAGTATCAGAAAATCTTATTAAAACTTTTGGAGAAGAGATTTTAAAA
TTTTAGGATCTTCTTAGATAAGAAAAGAAAATCAGAGAAGAATAACACAACAATATGCTT
AAAGTTTTAGAAGACTTGAATGATTCTTTAACTTCAGAAGTTACTTAAGAAAAACACATT
AGAGAAAAGTCAGAAGAAATGTTGCTTAAGTTATTAGAAGATACTTGTTAAAAGATTGAA
TCATCTCTTTTGAATTGA>TTHERM_000354599(protein)
MFSQTTPFRRNFESPARDIYTSPNLSKIAQLNERVKTIQTNFEESRAAKREVFQNKMRYV
DDRINKVEQQNDQKFRLLAEQLNKIQEEANQETLAKEIHSEKRLKEIKLLDKNFSINISK
EHQEKKENETKMLRQIDEKIQEMKIELFRDRKKREDYEVYKTSEIENRVNDLREQFEQEK
KIRDEVSENLIKTFGEEILKFQDLLRQEKKIREEQHNNMLKVLEDLNDSLTSEVTQEKHI
REKSEEMLLKLLEDTCQKIESSLLN>TTHERM_000354599(gene)
AAAAAGCATAAAAAACAAACAAAAAATAATAATAAATAAATAAATAATTATTTAATAAAA
TAAGTATCTTTTTTCATTATTGTCCAAACAAAATATATTTTAATTAAAAGACAAATTATA
AAAGTAATGTTCTCTCAAACAACTCCTTTTAGAAGAAATTTCGAAAGCCCCGCTAGAGAT
ATCTACAGTAATATTTATATTTAATTCTAGCAAATATATTATTTTAAAAATAACTTTAAT
TTGATTATTTTTATTATGATTATCTTAAAAGCATCGCCTAATCTATCTAAAATAGCTTAA
TTAAATGAAAGAGTTAAAACTATCCAAACCAATTTTGAGGAATCTAGAGCTGTATTTCAT
TTAGATATTTATTGATAAGCTGCCTATTTATTTATATTTTAGCAGCCATTGCACAATTTA
TCACAATTAAAATGGATTCTATAAAATAGGCCAAAAGAGAAGTATTTTAAAACAAGATGA
GATATGTAGATGATAGAATAAATAAAGTTGAATAATAAAATGATTAAAAGTTTAGAGTAA
ATAATTTTATTTAGAATACTCTTTATCTAATTAATTTTGAAAATTAATTTAGTTGCTTGC
TGAATAGTTGAATAAGATATAAGAAGAAGCTAACTAAGAAACATTGGCTAAAGAAGTAAT
AAAAATTATTTAAAGAATTTTGAGAATAAAAAAATAAATAAAGTATTTAGTTGACTAAAT
ACTTTGAAATAGGCTTATAAAATTGAATAATTCTTTGTAAGAAGCTGTAAATGTATTTTA
AATTATTTATATTATAAATTAGATTCATTCTGAAAAAAGATTAAAGGAAATTAAGTTGCT
GGACAAAAATTTTTCAATCAACATTAGCAAAGAGCATTAAGAAAAAAAAGAAAATGAAAC
TAAAATGTTGAGATAAATTGATGAAAAGATATAAGAAATGAAGATTGAGCTTTTCCGTGA
CAGAAAGAAAAGAGAAGATTACGAAGTTTATAAGACCAGCGAAATAGAAAATAGAGTTAA
CGATCTTAGAGAACAATTTGAATAAGAAAAAAAAATTAGGTAAAAAGCTGTTAAAGCATT
AATTAATTAATTAATTATTAGTATTGATTGTATTTATTAAATAAATAAATAAAACCAAAA
TAAAATTTATTAATTGCAAATAGATTAAATGCAACTCATTCATTATTTAAATTCATCAAC
ATAAGTTGATGAAATTATGAAATGCAATTCATATATTAATCTGTACTATGGTTTTATATA
AAAAAAAGAGATGAAGTATCAGAAAATCTTATTAAAACTTTTGGAGAAGAGATTTTAAAA
TTTTAGGATCTTCTTAGATAAGAAAAGAAAATCAGAGAAGAATAACACAACAATATGCTT
AAAGTTTTAGAAGACTTGAATGATTCTTTAACTTCAGAAGTTACTGTAAGAAAAAATATT
TTGTATTTTTTGCTAAAATTAATGAATTTCAATAAATAAATAGTAAGAAAAACACATTAG
AGAAAAGTCAGAAGAAATGTTGCTTAAGTTATTAGAAGATACTTGTTAAAAGATTGAATC
ATCTCTTTTGAATTGA