Identifiers and Description

Gene Model Identifier

TTHERM_00051970

Standard Name

TRM11 (tRNA methyltransferase)

Aliases

PreTt11377 | 3.m01656 | 3824.m03131

Description

homolog of the catalytic subunit of S. cerevisiae tRNA methyltransferase

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

No Data fetched for Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 11.9%

TetraMine Data

TTHERM_00051970

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_01568.19.997093137033517e-262hypothetical protein (584 aa)
OxytrichaContig16082.0.0.g991.999385218781115e-51Putative RNA methylase family
UPF0020
SGDYOL124C9.995528898049344e-31TRM11 Catalytic subunit of an
adoMet-dependent tRNA methyltr
ansferase complex (Trm11p-Trm1
12p), required for the methyla
tion of the guanosine nucleoti
de at position 10 (m2G10) in t
RNAs; contains a THUMP domain
and a methyltransferase domain
DictyBaseDDB_G02839692.0009605191578312e-25trmt11 on chromosome: 4 positi
on 1400103 to 1401870
WormBaseWBGene000221076.001696815660978e-24status:Partially_confirmed U
niProt:Q9N4H1 protein_id:CCD
73497.1
Stentor CoeruleusSteCoe_323755.242885663363464e-22

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences 

>TTHERM_00051970(coding)
ATGAAGGTTTTAGCACAGTTTAAGACAATCCCTAATTATGTTGATTTCTGTTTGCCAGAA
TTAAAATCCTTGATTGCTATGCACAATCTCGATTGGAGAGAGGTTTTTAAGCACGAATTT
GTATAAGAAGGTCAAGAAAACTTAACTAACAATAATGACTTGATTAACACAAGTCCCTAC
TACCCTTACATGTACCACTAGAACAAGAAATTAAACCAAAAGAAATAGTTATTACCCATT
AGCGCCTCTGAAATTCGTCATACAAGCTTCAGACGTTTTCCTTTCGTGTATTTGGAATTC
CCTAATGTAGAAATATGCCAATAGATTATTTAGCGTTCAATTTTGATTGATGTTTTCATA
GAAATAATTTCTGAAGCAACTAATTATGAAGATATAGTTAAATTTGCAGACAAGGAAATT
CTATTTAAGCACAATTAGGAAGATTAAAAGATTCTATTCGAAGTTGATCCCTATAATTCC
CATCTTACATAATAGGAAATTATAGATCGTATTGAAATCATTACAGAATCTCTTAACATG
AGGGGTAAAATCGACCTTAAAAACCCCTAAAAGAAATTCTGGATCATGGAAAGACATGTT
GATCCTTTTACTAAATAGACTGATAGCTCGATTACTAACACTTTGCTTGACATTTACTTT
GGTGTTGAAATTGGAAGATCTAAATCTTGCACTCGTATCTCTCAAAAAGAAAACTAAACT
AACAAATATGACTTGAGATAGAGAGCCTATCTTGGACCTACTTCTACAGATAACATTCTT
TCCTTCTTAATGTGCAACTAGGGTCTTACTAGATCTGGAGATATGATCTTAGATCCTTTT
GTAGGCAGTGGATCACTTATTATTCCACCCTCCCACTTTGGCGCTATTTGCTTTGGTGGT
GATTTAGATCCTAGAGTGCTTCATGGATTTGGAGTAGGACGCTTAAACAAAAAGTCATAA
TTCTACTAAAAAAATGAGGAATATTGCAAGGAAATGAAGCCAAAAATTATGCTTAATTTC
GAATAGTATGAATTAAATAAGCCAAATATTATTCGTATGGATTGCATAAATACAAATTTA
AGAGAAGTTGAAATATTTGATGCAATCATTTGCGATCCTCCTTACGGTTTCCGTGCCATG
ACTAGAACTGCAGGAAAGAAAGAGAAGAAGAGAAATAGAAAAGATAAGCAAAGCACCAAT
GCTAATACTTAAGAAGATGAAGCTTAACATGAAGAAGATGATTAATAAACTGGATCTCCT
CTTCTAAAGCAGACTGAGTAAGCTAAAATAGTAGAAGAAATATCAAATTAAATGAATGGA
TTAGATATTGAAGGAAAAAACACTCAACCTAAAAATGAAGAAGAAGAAAAAAAAAATAAT
GAAAACGGCGAAGAAAGACATTCATACGCACCAACTCTTACAGTATCAGTTGATTACATT
GTGAATGGTCTCGTTAGATTAGCTAACAGAGTCCTAGCTCCTGGAGGTAGATTAGTATTC
CTATATCCTATTGAAAGAGAACATTACAATTCAACAGGCATAGAAAAATTAAACTATCCA
AACTTCACTCTCGTTGATTATTCAGAGAATCCCCTAAGCGAAAAGAAAAGTAGAATTTTG
GTAACACTTCAAAAGAACAAATCAGTTAAGGAATTTTTAGAAGAAGCAGGATACAAGAAT
CTAGATGAGATGAACGAATAAAATTAATTTTAAAATTAAACAGATTAATAATAATAATAA
TAATAACAATAAACTTAAGCTCAGTGA


>TTHERM_00051970(protein)
MKVLAQFKTIPNYVDFCLPELKSLIAMHNLDWREVFKHEFVQEGQENLTNNNDLINTSPY
YPYMYHQNKKLNQKKQLLPISASEIRHTSFRRFPFVYLEFPNVEICQQIIQRSILIDVFI
EIISEATNYEDIVKFADKEILFKHNQEDQKILFEVDPYNSHLTQQEIIDRIEIITESLNM
RGKIDLKNPQKKFWIMERHVDPFTKQTDSSITNTLLDIYFGVEIGRSKSCTRISQKENQT
NKYDLRQRAYLGPTSTDNILSFLMCNQGLTRSGDMILDPFVGSGSLIIPPSHFGAICFGG
DLDPRVLHGFGVGRLNKKSQFYQKNEEYCKEMKPKIMLNFEQYELNKPNIIRMDCINTNL
REVEIFDAIICDPPYGFRAMTRTAGKKEKKRNRKDKQSTNANTQEDEAQHEEDDQQTGSP
LLKQTEQAKIVEEISNQMNGLDIEGKNTQPKNEEEEKKNNENGEERHSYAPTLTVSVDYI
VNGLVRLANRVLAPGGRLVFLYPIEREHYNSTGIEKLNYPNFTLVDYSENPLSEKKSRIL
VTLQKNKSVKEFLEEAGYKNLDEMNEQNQFQNQTDQQQQQQQQQTQAQ


>TTHERM_00051970(gene)
ATGAAGGTTTTAGCACAGTTTAAGACAATCCCTAATTATGTTGATTTCTGTTTGCCAGAA
TTAAAATCCTTGATTGCTATGCACAATCTCGATTGGAGAGAGGTTTTTAAGCACGAATTT
GTATAAGAAGGTCAAGAAAACTTAACTAACAATAATGACTTGATTAACACAAGTCCCTAC
TACCCTTACATGTACCACTAGAACAAGAAATTAAACCAAAAGAAATAGTTATTACCCATT
AGCGCCTCTGAAATTCGTCATACAAGCTTCAGACGTTTTCCTTTCGTGTATTTGGAATTC
CCTAATGTAGAAATATGCCAATAGATTATTTAGCGTTCAATTTTGATTGATGTTTTCATA
GAAATAATTTCTGAAGCAACTAATTATGAAGATATAGTTAAATTTGCAGACAAGGAAATT
CTATTTAAGCACAATTAGGAAGATTAAAAGATTCTATTCGAAGTTGATCCCTATAATTCC
CATCTTACATAATAGGAAATTATAGATCGTATTGAAATCATTACAGAATCTCTTAACATG
AGGGGTAAAATCGACCTTAAAAACCCCTAAAAGAAATTCTGGATCATGGAAAGACATGTT
GATCCTTTTACTAAATAGACTGATAGCTCGATTACTAACACTTTGCTTGACGTAATTAAC
TACTTTTTGTTGTATTTTCCCTAGCTTCAAGATTAATAAACTACTTTTTATAACAATGAA
TAAGTTAAATTTATTCTCTTTGGAGATTACAGAGCCCAAATAAATTTATTTTACTCCTAA
AAGCAAAAGCTTCATAAGCAAATATTTTTAACATAAAATTTATTTTTACCTAAAAATAGT
ATTTTTTTTTTAAGTTCAAGAAAATCTTAGTATTTAAATGCAATTTCATTTAGTAGTTTA
TCTTTCTCATTTGCAGTTATGCAGTAGAGAAAGGAATGTTTAATACCTAAATATTCATTG
ATAGTATATTTAAAACTATTTTTTTTAAATAGATTTACTTTGGTGTTGAAATTGGAAGAT
CTAAATCTTGCACTCGTATCTCTCAAAAAGAAAACTAAACTAACAAATATGACTTGAGAT
AGAGAGCCTATCTTGGACCTACTTCTACAGATAACATTCTTTCCTTCTTAATGTGCAACT
AGGGTCTTACTAGATCTGGAGATATGATCTTAGATCCTTTTGTAGGCAGTGGATCACTTA
TTATTCCACCCTCCCACTTTGGCGCTATTTGCTTTGGTGGTGATTTAGATCCTAGAGTGC
TTCATGGATTTGGAGTAGGACGCTTAAACAAAAAGTCATAATTCTACTAAAAAAATGAGG
AATATTGCAAGGAAATGAAGCCAAAAATTATGCTTAATTTCGAATAGTATGAATTAAATA
AGCCAAATATTATTCGTATGGATTGCATAAATACAAATTTAAGAGAAGTTGAAATATTTG
ATGCAATCATTTGCGATCCTCCTTACGGTTTCCGTGCCATGACTAGAACTGCAGGAAAGA
AAGAGAAGAAGAGAAATAGAAAAGATAAGCAAAGCACCAATGCTAATACTTAAGAAGATG
AAGCTTAACATGAAGAAGATGATTAATAAACTGGATCTCCTCTTCTAAAGCAGACTGAGT
AAGCTAAAATAGTAGAAGAAATATCAAATTAAATGAATGGATTAGATATTGAAGGAAAAA
ACACTCAACCTAAAAATGAAGAAGAAGAAAAAAAAAATAATGAAAACGGCGAAGAAAGAC
ATTCATACGCACCAACTCTTACAGTATCAGTTGATTACATTGTGAATGGTCTCGTTAGAT
TAGCTAACAGAGTCCTAGCTCCTGGAGGTAGATTAGTATTCCTATATCCTATTGAAAGAG
AACATTACAATTCAACAGGCATAGAAAAATTAAACTATCCAAACTTCACTCTCGTTGATT
ATTCAGAGAATCCCCTAAGCGAAAAGAAAAGTAGAATTTTGGTAACACTTCAAAAGAACA
AATCAGTTAAGGAATTTTTAGAAGAAGCAGGATACAAGAATCTAGATGAGATGAACGAAT
AAAATTAATTTTAAAATTAAACAGATTAATAATAATAATAATAATAACAATAAACTTAAG
CTCAGTGA