Identifiers and Description
Gene Model Identifier
TTHERM_00569420Standard Name
TRF5 (Topoisomerase one-Related Function)Aliases
PreTt10470 | 76.m00172 | 3810.m02033Description
TRF5 chitinase class I family protein; Related to Saccharomyces cerevisiae noncanonical poly(A) polymerase proteins TRF5 and PAP2 (TRF4)Genome Browser (Macronucleus)
![]()
Genome Browser (Micronucleus)
![]()
Gene Ontology Annotations
No Data fetched for Gene Ontology Annotations
Domains
No Data fetched for Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.1%
TetraMine Data
TTHERM_00569420
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_03466.1 9.997093137033517e-262 chitinase class I family prote
in (459 aa)
Oxytricha Contig1080.1.g59 2.000364041471746e-45 Cid1 family poly A polymerase
SGD YOL115W 2.0008113830639685e-30 PAP2 Non-canonical poly(A) pol
ymerase, involved in nuclear R
NA degradation as a component
of the TRAMP complex; catalyze
s polyadenylation of hypomodif
ied tRNAs, and snoRNA and rRNA
precursors; overlapping but n
on-redundant functions with Tr
f5p
DictyBase DDB_G0295737 1.9993007828132465e-27 DDB_G0295737 on chromosome: 5
position 3359151 to 3362061
WormBase WBGene00014115 4.9988726541653934e-26 locus:gld-4 Poly(A) RNA poly
merase gld-4 status:Confirme
d UniProt:G5EFL0 protein_i
d:CAB02138.3
Stentor Coeruleus SteCoe_30056 7.095474162284704e-23
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00569420(coding)
ATGTCAGATAAAATGGATAAAATTTTGAAAGACTTAGATCTCACAAGTGGGTCTTAAAAG
AGAAAAATGAAAGATAGAGATTTAGAATAAGAATAAGGCGATTTAAGTAAAGAAATAATG
TAAAGCGCAGATAATTCATTCAAGATTGAGGATTAAACTTAAAAAAAAATAAAGATATCA
GATGATATTTAGGGAGATTATAATAATAATTAAGATGTAAATTAACAAGATGGTGTTTTA
GCAGAGAAAATAGGCGAATAGATAGTTTTTATAAACCTTGAAGAAAATAAATAGCAATAC
TAAAATAAACCTGTAGAAATAGATGACTTTTTATAGTTTGAGGAAAAATTAGATAAAAAG
GAAGCCGAAGAAGGTGATTTAAATATAGAACCAATTATTGGAAAGCAAGCAGATGAATAA
AAGGTAGCACCCTGGGCTTCTCTTAGAACTCTGCGTATTAAAAATCCTCTTTTGAGATTA
CATAATGAAATTATTGAGCTTACTGATTATTTATCACCTACCAAACAAGAGCATGAAATA
AGATTAAAGTCAATGGAAAGGCTCAAAAAAATTTTGTTAGATGCAGTTCCTGGATGTGAA
GTTAAAACCTTTGGTTCTTTCAGCACTGAATTATATCTACCTAACTCAGATATAGATATG
GTTATTGTGAAAGATGATATACAGAACAAATCTCTGTATAAAAAAGTAGCTGATAAAATA
ATGAATTGTGATGATATTTATGAAAATATAAATTTAGTTACTAATGCTAAGGTGCCTATT
ATCAAATTTGTTGAGAAGGAAACTTAAATCAATTTTGATATTTCTTTTAACAAAGAAGAT
GGTGTTAAATAATTATCAGAAGTTAAAAAAGGCTTAGAACTCTATCCTGAAATGAAATAC
CTGATTATGGTAATGAAATGCATTCTCAGATAAAGAGACTTGCATGAAACATATTCAGGT
GGTATTGGAAGTTTTCTGCTTTTCTGTATGATTCTTGCATTTTTAAGGGATCTTCGCAGA
CAATATGAAAAGGAAAATAGAGTTTAAGAAATACAAAATATTACCTTAGGAGAATATTTA
TTAAAAATGTTTAAATTTTATGGATTTTTTGATGTTGACAATAAAAGAATTATCATGCAT
GAAGGAGGTGAAGCACAATTCAAAATTTACATGATTGTTAATTAATTTTTACTTAAAATA
TATATTTAGGTGCAATTGTCGAAAAGGATATTAAAGATAAAAGATTTAGCTTACTTAGCC
CCTAGGATCCTACTCACGATATTGGAAATTCATCTTTCAAAATCAAAGAATAAGTTTTCC
CACTATTCAAAAATAGATTCTAATTCTTTACTAATTATAACTTCAAATAAGGCGAAAGCA
CTCTTAAATATTTAGTCAATCCATCTAACTCAACATTTACTTTCTAAAAGGAAGAAAAGT
GAAAATAAAAAATTTATCTATCCTCTAAACAATAAAGCCTTTTGA>TTHERM_00569420(protein)
MSDKMDKILKDLDLTSGSQKRKMKDRDLEQEQGDLSKEIMQSADNSFKIEDQTQKKIKIS
DDIQGDYNNNQDVNQQDGVLAEKIGEQIVFINLEENKQQYQNKPVEIDDFLQFEEKLDKK
EAEEGDLNIEPIIGKQADEQKVAPWASLRTLRIKNPLLRLHNEIIELTDYLSPTKQEHEI
RLKSMERLKKILLDAVPGCEVKTFGSFSTELYLPNSDIDMVIVKDDIQNKSLYKKVADKI
MNCDDIYENINLVTNAKVPIIKFVEKETQINFDISFNKEDGVKQLSEVKKGLELYPEMKY
LIMVMKCILRQRDLHETYSGGIGSFLLFCMILAFLRDLRRQYEKENRVQEIQNITLGEYL
LKMFKFYGFFDVDNKRIIMHEGGEAQFKIYMIVNQFLLKIYIQVQLSKRILKIKDLAYLA
PRILLTILEIHLSKSKNKFSHYSKIDSNSLLIITSNKAKALLNIQSIHLTQHLLSKRKKS
ENKKFIYPLNNKAF>TTHERM_00569420(gene)
ATGTCAGATAAAATGGATAAAATTTTGAAAGACTTAGATCTCACAAGTGGTAAAATAATT
TATAGATTAATATTATTTTAGCTGATATGATAAATATAATTATTAAGGGTCTTAAAAGAG
AAAAATGAAAGATAGAGATTTAGAATAAGAATAAGGCGATTTAAGTAAAGAAATAATGTA
AAGCGCAGATAATTCATTCAAGATTGAGGATTAAACTTAAAAAAAAATAAAGATATCAGA
TGATATTTAGGGAGATTATAATAATAATTAAGATGTAAATTAACAAGATGGTGTTTTAGC
AGAGAAAATAGGCGAATAGATAGTTTTTATAAACCTTGAAGAAAATAAATAGCAATACTA
AAATAAACCTGTAGAAATAGATGACTTTTTATAGTTTGAGGAAAAATTAGATAAAAAGGA
AGCCGAAGAAGGTGATTTAAATATAGAACCAATTATTGGAAAGCAAGCAGATGAATAAAA
GGTAGCACCCTGGGCTTCTCTTAGAACTCTGCGTATTAAAAATCCTCTTTTGAGATTACA
TAATGAAATTATTGAGCTTACTGATTATTTATCACCTACCAAACAAGAGCATGAAATAAG
ATTAAAGTCAATGGAAAGGTAAAAAGTGACTGTATATTTGTATTATTTTGTTAGTTGGAA
AATAAATCCTTTTTTTAGCCTACTATCAATTCTTATTACTTAATAGTATAAAATCTTAAA
ATTTTAAACTGTGTATGATATTAATTAAAAATAATTTGCTTAAAGTAGAAGAAAGTAAAT
AAATAAACAAAAAAACAAAAATCATATGTGCTTATTAAATAATCAATCTAATCCAATTTA
ATTAAAAAATTTTATCCTATTTTAAATATAGGCTCAAAAAAATTTTGTTAGATGCAGTTC
CTGGATGTGAAGTTAAAACCTTTGGTTCTTTCAGCACTGAATTATATCTACCTAACTCAG
ATATAGATATGGTAAATTTTAAAATATATTTTAAGTTTAAAATAATTCACCTCCAATTAA
TTATATTGAATTAATTTGTCGTCTAGAAAATATTTAGTGATTACAAATAATATGAACATT
AATTAAAATTTAAAAATAATTTGAATGTGATTGTAATTGATTTATAACTAATGAAATTAT
TTTTTATAATAATATGAAAGGTTATTGTGAAAGATGATATACAGAACAAATCTCTGTATA
AAAAAGTAGCTGATAAAATAATGAATTGTGATGATATTTATGAAAATATAAATTTAGTTA
CTAATGCTAAGGTGCCTATTATCAAATTTGTTGAGAAGGAAACTTAAATCAATTTTGATA
TTTCTTTTAACAAAGAAGATGGTGTTAAATAATTATCAGAAGTTAAAAAAGGCTTAGAAC
TCTATCCTGAAATGAAATACCTGATTATGGTAATGAAATGCATTCTCAGATAAAGAGACT
TGCATGAAACATATTCAGGTGGTATTGGAAGTTTTCTGCTTTTCTGTATGATTCTTGCAT
TTTTAAGGGATCTTCGCAGACAATATGAAAAGGAAAATAGAGTTTAAGAAATACAAAATA
TTACCTTAGGAGAATATTTATTAAAAATGTTTAAATTTTATGGATTTTTTGATGTTGACA
ATAAAAGAATTATCATGCATGAAGGAGGTGAAGCACAATTCAAAATTTACATGATTGTTA
ATTAATTTTTACTTAAAATATATATTTAGGTGCAATTGTCGAAAAGGATATTAAAGATAA
AAGATTTAGCTTACTTAGCCCCTAGGATCCTACTCACGATATTGGAAATTCATCTTTCAA
AATCAAAGAATAAGTTTTCCCACTATTCAAAAATAGATTCTAATTCTTTACTAATTATAA
CTTCAAATAAGGCGAAAGCACTCTTAAATATTTAGTCAATCCATCTAACTCAACATTTAC
TTTCTAAAAGGAAGAAAAGTGAAAATAAAAAATTTATCTATCCTCTAAACAATAAAGCCT
TTTGA