Identifiers and Description

Gene Model Identifier

TTHERM_00031680

Standard Name

THD7 (Tetrahymena Histone Deacetylase 7)

Aliases

PreTt14300 | 2.m02084 | 3825.m02684

Description

Zn-finger in ubiquitin-hydrolases and other protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

No Data fetched for Domains

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 13.4%

TetraMine Data

TTHERM_00031680

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_00865.1	8.003007177279125e-133	Zn-finger in ubiquitin-hydrola se (277 aa)
WormBase	WBGene00018319	2.000769134519826e-18	locus:hda-6 status:Confirmed UniProt:G8JYB7 protein_id :CCD71107.1
DictyBase	DDB_G0283917	4.997543945741262e-17	sir2A on chromosome: 4 positio n 1272110 to 1273864
Oxytricha	Contig18612.0.g7	0.000000000000001999258566166494	Zn-finger in ubiquitin-hydrola ses and other protein
Stentor Coeruleus	SteCoe_28457	0.0000000000006914400106940203
SGD	YBR058C	0.00000030014504373857585	UBP14 Ubiquitin-specific prote ase that specifically disassem bles unanchored ubiquitin chai ns; involved in fructose-1,6-b isphosphatase (Fbp1p) degradat ion; similar to human isopepti dase T

General Information

No Data fetched for General Information

Associated Literature

1. Ref:18178773: Smith JJ, Torigoe SE, Maxson J, Fish LC, Wiley EA (2008) A class II histone deacetylase acts on newly synthesized histones in Tetrahymena. Eukaryotic cell 7(3):471-82
2. Ref:SUPR000094
3. Ref:SUPR000092

Sequences

>TTHERM_00031680(coding)
ATGATAAATTTATAGGCAGGATAGGCTTTTATAGATCCATTTACAGGCGAAGAAGCATTT
GCAGTAGAACCTATTACTAATTGTCCACACGCTCTAAAGCTAGATTTGAAAAAAACAGAA
GAGACTATTTATCAGAAAAGATAATAGTTATTTTGGAGTTAATGTAGCAATTGTGAAAAT
GTTGGTGAAAATTGGTTTTGCTTAATTTGTAATAACGTCTATTGCAGTAGGTATGTTAAA
GGTCATATGGCTATGCATAATTAATAGAATTAAGATCATTAAGTTGCTGTTAGTTTTTCT
GATTTAAGCTTTTGGTGTTACGAATGTGATTCTTATATAACAAATTAAGACCTTTCCAAG
TTGAGAAAATTATTTTAAAAGGCTAAATTTAATGAAGGAGATTTTTCTTAAAAGCAGAAT
TTAGTATCATAAAGTGATAAGAATCATGAAGAAATTAGTTAAAAAGCCATCAACGGTAAT
GGATTTTTTGTAGCAGGAGATATTAAAGAATAAAAGGTTTATTAAGTACTAATTTTAAGT
TAGTTTTAGAAAGATATAATTGTGTAAAAAGGAGTGTTAAAGGGATATTAAATTTAAAAT
AGTAAAAGTAATTATGCTTAACAAATTATAAAAAATGAAAGTGAAGAAGTTTTGGGATCT
GTTATAAGATTTGGAAAAAATTTGGAGCAAGTAACCAGAGAAAAGATAGCCTATTTAATG
AATGAAATAGAAGGATTTCCCATTCACACTTCAATTAAATTTGAAAAAGTAATTTCTGGA
GAAGAATAATTAGAGTTAGCTATTTATTGCTTAGATGATTGA

>TTHERM_00031680(protein)
MINLQAGQAFIDPFTGEEAFAVEPITNCPHALKLDLKKTEETIYQKRQQLFWSQCSNCEN
VGENWFCLICNNVYCSRYVKGHMAMHNQQNQDHQVAVSFSDLSFWCYECDSYITNQDLSK
LRKLFQKAKFNEGDFSQKQNLVSQSDKNHEEISQKAINGNGFFVAGDIKEQKVYQVLILS
QFQKDIIVQKGVLKGYQIQNSKSNYAQQIIKNESEEVLGSVIRFGKNLEQVTREKIAYLM
NEIEGFPIHTSIKFEKVISGEEQLELAIYCLDD

>TTHERM_00031680(gene)
ATGATAAATTTATAGGCAGGATAGGCTTTTATAGATCCATTTACAGGCGAAGAAGCATTT
GCAGTAGAACCTATTACTAATTGTCCACACGCTCTAAAGCTAGATTTGAAAAAAACAGAA
GAGACTATTTATCAGAAAAGATAATAGTTATTTTGGAGTTAATGTAGCAATTGTGAAAAT
GTTGGTGAAAATTGGTTTTGCTTAATTTGTAATAACGTCTATTGCAGTAGGTATGTTAAA
GGTCATATGGCTATGCATAATTAATAGAATTAAGATCATTAAGTTGCTGTTAGTTTTTCT
GATTTAAGCTTTTGGTGTTACGAATGTGATTCTTATATAACAAATTAAGACCTTTCCAAG
TTGAGAAAATTATTTTAAAAGGCTAAATTTAATGAAGTAAGTAAATTAAATGTTTTATTA
TTAAAATTAATTTTAGCTGTTTATTACATTAAATATTTTATTTACATTATTAAGTATTCA
TTTTTTAAATAACAATTTCTATAAAATCATATGTTTTTAAACATGAACATCAAAATTAAA
TCAAAAATAGGGAGATTTTTCTTAAAAGCAGAATTTAGTATCATAAAGTGATAAGAATCA
TGAAGAAATTAGTTAAAAAGCCATCAACGGTAATGGATTTTTTGTAGCAGGAGATATTAA
AGAATAAAAGGTTTATTAAGTACTAATTTTAAGTTAGTTTTAGAAAGATATAATTGTGTA
AAAAGGAGTGTTAAAGGGATATTAAATTTAAAATAGTAAAAGTAATTATGCTTAACAAAT
TATAAAAAATGAAAGTGAAGAAGTTTTGGGATCTGTTATAAGATTTGGAAAAAATTTGGA
GCAAGTAACCAGAGAAAAGATAGCCTATTTAATGAATGAAATAGAAGGATTTCCCATTCA
CACTTCAATTAAATTTGAAAAAGTAATTTCTGGAGAAGAATAATTAGAGTTAGCTATTTA
TTGCTTAGATGATTGA