Identifiers and Description

Gene Model Identifier

TTHERM_00031680

Standard Name

THD7 (Tetrahymena Histone Deacetylase 7)

Aliases

PreTt14300 | 2.m02084 | 3825.m02684 | NDT1

Description

Zn-finger in ubiquitin-hydrolases and other protein; suppresses DNA transcription by deacetylation of histones

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

No Data fetched for Domains

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 13.4%

TetraMine Data

TTHERM_00031680

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_00865.1	8.003007177279125e-133	Zn-finger in ubiquitin-hydrola se (277 aa)
WormBase	WBGene00018319	2.000769134519826e-18	locus:hda-6 status:Confirmed UniProt:G8JYB7 protein_id :CCD71107.1
DictyBase	DDB_G0283917	4.997543945741262e-17	sir2A on chromosome: 4 positio n 1272110 to 1273864
Oxytricha	Contig18612.0.g7	0.000000000000001999258566166494	Zn-finger in ubiquitin-hydrola ses and other protein
Stentor Coeruleus	SteCoe_28457	0.0000000000006914400106940203
SGD	YBR058C	0.00000030014504373857585	UBP14 Ubiquitin-specific prote ase that specifically disassem bles unanchored ubiquitin chai ns; involved in fructose-1,6-b isphosphatase (Fbp1p) degradat ion; similar to human isopepti dase T

General Information

No Data fetched for General Information

Associated Literature

1. Ref:18178773: Smith JJ, Torigoe SE, Maxson J, Fish LC, Wiley EA (2008) A class II histone deacetylase acts on newly synthesized histones in Tetrahymena. Eukaryotic cell 7(3):471-82
2. Ref:SUPR000092
3. Ref:SUPR000094

Sequences

>TTHERM_00031680(coding)
ATGATAAATTTATAGGCAGGATAGGCTTTTATAGATCCATTTACAGGCGAAGAAGCATTT
GCAGTAGAACCTATTACTAATTGTCCACACGCTCTAAAGCTAGATTTGAAAAAAACAGAA
GAGACTATTTATCAGAAAAGATAATAGTTATTTTGGAGTTAATGTAGCAATTGTGAAAAT
GTTGGTGAAAATTGGTTTTGCTTAATTTGTAATAACGTCTATTGCAGTAGGTATGTTAAA
GGTCATATGGCTATGCATAATTAATAGAATTAAGATCATTAAGTTGCTGTTAGTTTTTCT
GATTTAAGCTTTTGGTGTTACGAATGTGATTCTTATATAACAAATTAAGACCTTTCCAAG
TTGAGAAAATTATTTTAAAAGGCTAAATTTAATGAAGGAGATTTTTCTTAAAAGCAGAAT
TTAGTATCATAAAGTGATAAGAATCATGAAGAAATTAGTTAAAAAGCCATCAACGGTAAT
GGATTTTTTGTAGCAGGAGATATTAAAGAATAAAAGGTTTATTAAGTACTAATTTTAAGT
TAGTTTTAGAAAGATATAATTGTGTAAAAAGGAGTGTTAAAGGGATATTAAATTTAAAAT
AGTAAAAGTAATTATGCTTAACAAATTATAAAAAATGAAAGTGAAGAAGTTTTGGGATCT
GTTATAAGATTTGGAAAAAATTTGGAGCAAGTAACCAGAGAAAAGATAGCCTATTTAATG
AATGAAATAGAAGGATTTCCCATTCACACTTCAATTAAATTTGAAAAAGTAATTTCTGGA
GAAGAATAATTAGAGTTAGCTATTTATTGCTTAGATGATTGA

>TTHERM_00031680(protein)
MINLQAGQAFIDPFTGEEAFAVEPITNCPHALKLDLKKTEETIYQKRQQLFWSQCSNCEN
VGENWFCLICNNVYCSRYVKGHMAMHNQQNQDHQVAVSFSDLSFWCYECDSYITNQDLSK
LRKLFQKAKFNEGDFSQKQNLVSQSDKNHEEISQKAINGNGFFVAGDIKEQKVYQVLILS
QFQKDIIVQKGVLKGYQIQNSKSNYAQQIIKNESEEVLGSVIRFGKNLEQVTREKIAYLM
NEIEGFPIHTSIKFEKVISGEEQLELAIYCLDD

>TTHERM_00031680(gene)
ATGATAAATTTATAGGCAGGATAGGCTTTTATAGATCCATTTACAGGCGAAGAAGCATTT
GCAGTAGAACCTATTACTAATTGTCCACACGCTCTAAAGCTAGATTTGAAAAAAACAGAA
GAGACTATTTATCAGAAAAGATAATAGTTATTTTGGAGTTAATGTAGCAATTGTGAAAAT
GTTGGTGAAAATTGGTTTTGCTTAATTTGTAATAACGTCTATTGCAGTAGGTATGTTAAA
GGTCATATGGCTATGCATAATTAATAGAATTAAGATCATTAAGTTGCTGTTAGTTTTTCT
GATTTAAGCTTTTGGTGTTACGAATGTGATTCTTATATAACAAATTAAGACCTTTCCAAG
TTGAGAAAATTATTTTAAAAGGCTAAATTTAATGAAGTAAGTAAATTAAATGTTTTATTA
TTAAAATTAATTTTAGCTGTTTATTACATTAAATATTTTATTTACATTATTAAGTATTCA
TTTTTTAAATAACAATTTCTATAAAATCATATGTTTTTAAACATGAACATCAAAATTAAA
TCAAAAATAGGGAGATTTTTCTTAAAAGCAGAATTTAGTATCATAAAGTGATAAGAATCA
TGAAGAAATTAGTTAAAAAGCCATCAACGGTAATGGATTTTTTGTAGCAGGAGATATTAA
AGAATAAAAGGTTTATTAAGTACTAATTTTAAGTTAGTTTTAGAAAGATATAATTGTGTA
AAAAGGAGTGTTAAAGGGATATTAAATTTAAAATAGTAAAAGTAATTATGCTTAACAAAT
TATAAAAAATGAAAGTGAAGAAGTTTTGGGATCTGTTATAAGATTTGGAAAAAATTTGGA
GCAAGTAACCAGAGAAAAGATAGCCTATTTAATGAATGAAATAGAAGGATTTCCCATTCA
CACTTCAATTAAATTTGAAAAAGTAATTTCTGGAGAAGAATAATTAGAGTTAGCTATTTA
TTGCTTAGATGATTGA