Identifiers and Description

Gene Model Identifier

TTHERM_00031680

Standard Name

THD7 (Tetrahymena Histone Deacetylase 7)

Aliases

PreTt14300 | 2.m02084 | 3825.m02684 | NDT1

Description

THD7 Zn-finger in ubiquitin-hydrolase; Zn-finger in ubiquitin-hydrolases and other protein; suppresses DNA transcription by deacetylation of histones

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

GBrowse

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

No Data fetched for Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 13.4%

TetraMine Data

TTHERM_00031680

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_00865.18.003007177279125e-133Zn-finger in ubiquitin-hydrola
se (277 aa)
WormBaseWBGene000183192.000769134519826e-18locus:hda-6 status:Confirmed
UniProt:G8JYB7 protein_id
:CCD71107.1
DictyBaseDDB_G02839174.997543945741262e-17sir2A on chromosome: 4 positio
n 1272110 to 1273864
OxytrichaContig18612.0.g70.000000000000001999258566166494Zn-finger in ubiquitin-hydrola
ses and other protein
Stentor CoeruleusSteCoe_284570.0000000000006914400106940203
SGDYBR058C0.00000030014504373857585UBP14 Ubiquitin-specific prote
ase that specifically disassem
bles unanchored ubiquitin chai
ns; involved in fructose-1,6-b
isphosphatase (Fbp1p) degradat
ion; similar to human isopepti
dase T

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:18178773: Smith JJ, Torigoe SE, Maxson J, Fish LC, Wiley EA (2008) A class II histone deacetylase acts on newly synthesized histones in Tetrahymena. Eukaryotic cell 7(3):471-82
  2. Ref:SUPR000092
  3. Ref:SUPR000094

Sequences 

>TTHERM_00031680(coding)
ATGATAAATTTATAGGCAGGATAGGCTTTTATAGATCCATTTACAGGCGAAGAAGCATTT
GCAGTAGAACCTATTACTAATTGTCCACACGCTCTAAAGCTAGATTTGAAAAAAACAGAA
GAGACTATTTATCAGAAAAGATAATAGTTATTTTGGAGTTAATGTAGCAATTGTGAAAAT
GTTGGTGAAAATTGGTTTTGCTTAATTTGTAATAACGTCTATTGCAGTAGGTATGTTAAA
GGTCATATGGCTATGCATAATTAATAGAATTAAGATCATTAAGTTGCTGTTAGTTTTTCT
GATTTAAGCTTTTGGTGTTACGAATGTGATTCTTATATAACAAATTAAGACCTTTCCAAG
TTGAGAAAATTATTTTAAAAGGCTAAATTTAATGAAGGAGATTTTTCTTAAAAGCAGAAT
TTAGTATCATAAAGTGATAAGAATCATGAAGAAATTAGTTAAAAAGCCATCAACGGTAAT
GGATTTTTTGTAGCAGGAGATATTAAAGAATAAAAGGTTTATTAAGTACTAATTTTAAGT
TAGTTTTAGAAAGATATAATTGTGTAAAAAGGAGTGTTAAAGGGATATTAAATTTAAAAT
AGTAAAAGTAATTATGCTTAACAAATTATAAAAAATGAAAGTGAAGAAGTTTTGGGATCT
GTTATAAGATTTGGAAAAAATTTGGAGCAAGTAACCAGAGAAAAGATAGCCTATTTAATG
AATGAAATAGAAGGATTTCCCATTCACACTTCAATTAAATTTGAAAAAGTAATTTCTGGA
GAAGAATAATTAGAGTTAGCTATTTATTGCTTAGATGATTGA


>TTHERM_00031680(protein)
MINLQAGQAFIDPFTGEEAFAVEPITNCPHALKLDLKKTEETIYQKRQQLFWSQCSNCEN
VGENWFCLICNNVYCSRYVKGHMAMHNQQNQDHQVAVSFSDLSFWCYECDSYITNQDLSK
LRKLFQKAKFNEGDFSQKQNLVSQSDKNHEEISQKAINGNGFFVAGDIKEQKVYQVLILS
QFQKDIIVQKGVLKGYQIQNSKSNYAQQIIKNESEEVLGSVIRFGKNLEQVTREKIAYLM
NEIEGFPIHTSIKFEKVISGEEQLELAIYCLDD


>TTHERM_00031680(gene)
ATGATAAATTTATAGGCAGGATAGGCTTTTATAGATCCATTTACAGGCGAAGAAGCATTT
GCAGTAGAACCTATTACTAATTGTCCACACGCTCTAAAGCTAGATTTGAAAAAAACAGAA
GAGACTATTTATCAGAAAAGATAATAGTTATTTTGGAGTTAATGTAGCAATTGTGAAAAT
GTTGGTGAAAATTGGTTTTGCTTAATTTGTAATAACGTCTATTGCAGTAGGTATGTTAAA
GGTCATATGGCTATGCATAATTAATAGAATTAAGATCATTAAGTTGCTGTTAGTTTTTCT
GATTTAAGCTTTTGGTGTTACGAATGTGATTCTTATATAACAAATTAAGACCTTTCCAAG
TTGAGAAAATTATTTTAAAAGGCTAAATTTAATGAAGTAAGTAAATTAAATGTTTTATTA
TTAAAATTAATTTTAGCTGTTTATTACATTAAATATTTTATTTACATTATTAAGTATTCA
TTTTTTAAATAACAATTTCTATAAAATCATATGTTTTTAAACATGAACATCAAAATTAAA
TCAAAAATAGGGAGATTTTTCTTAAAAGCAGAATTTAGTATCATAAAGTGATAAGAATCA
TGAAGAAATTAGTTAAAAAGCCATCAACGGTAATGGATTTTTTGTAGCAGGAGATATTAA
AGAATAAAAGGTTTATTAAGTACTAATTTTAAGTTAGTTTTAGAAAGATATAATTGTGTA
AAAAGGAGTGTTAAAGGGATATTAAATTTAAAATAGTAAAAGTAATTATGCTTAACAAAT
TATAAAAAATGAAAGTGAAGAAGTTTTGGGATCTGTTATAAGATTTGGAAAAAATTTGGA
GCAAGTAACCAGAGAAAAGATAGCCTATTTAATGAATGAAATAGAAGGATTTCCCATTCA
CACTTCAATTAAATTTGAAAAAGTAATTTCTGGAGAAGAATAATTAGAGTTAGCTATTTA
TTGCTTAGATGATTGA