Identifiers and Description
Gene Model Identifier
TTHERM_00395710Standard Name
THD5 (Tetrahymena Histone Deacetylase 5)Aliases
PreTt23595 | 42.m00329 | 3813.m01547Description
THD5 histone deacetylase family protein; Histone deacetylase family protein; suppresses DNA transcription by deacetylation of histones; localizes to macronucleusGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- macronucleus (IDA) | GO:0031039 | Ref:SUPR000095
Domains
No Data fetched for Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 19.5%
TetraMine Data
TTHERM_00395710
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_11546.1 9.997093137033517e-262 histone deacetylase (682 aa)
Oxytricha Contig549.1.g14 1.9999366565375063e-113 Histone deacetylase domain
WormBase WBGene00007953 3.000074895537278e-78 locus:hda-11 status:Partiall
y_confirmed UniProt:Q18477
protein_id:CAA94910.3
Stentor Coeruleus SteCoe_25228 6.813556821545298e-46 SGD YNL021W 2.9992476920535046e-16 HDA1 Putative catalytic subuni
t of a class II histone deacet
ylase complex that also contai
ns Hda2p and Hda3p; Hda1p inte
racts with the Hda2p-Hda3p sub
complex to form an active tetr
amer; deletion increases histo
ne H2B, H3 and H4 acetylation
DictyBase DDB_G0268024 9.997764199084386e-16 hdaA on chromosome: 1 position
1320084 to 1322172
General Information
No Data fetched for General Information
Associated Literature
- Ref:18178773: Smith JJ, Torigoe SE, Maxson J, Fish LC, Wiley EA (2008) A class II histone deacetylase acts on newly synthesized histones in Tetrahymena. Eukaryotic cell 7(3):471-82
- Ref:SUPR000086
- Ref:SUPR000095
Sequences
>TTHERM_00395710(coding)
ATGTACACACTAATTTGCGCTGTTTAAGATTTAGCTTTATTTGGAATTTTTATTACAGGG
TTGGTCTTATTAGAATGGCAAATAATTGTATTTCCCATTTTAATTTACATCCTCATCCCA
TTTTTAAACGAGTTGGTCTACAATTGCTTTGCTAAATTATTATTCACAATAGAAAAGGAG
AAGAAAAGGATGGAGTAAAGGTATTCTTAATCAGAATTAGAAAATAAATATATTGAAAAT
TTACCTATTTTATACCATCCCTCATACAACATTACAGCTTGTGGGATTGAAAAACTTCAC
CCTTTTGATTCTGTAAAGTATGGAAGAGTTTTTAATATACTCAAAGAAAAAGGATTTCTA
TAAGAATAAGGTTTCTATAAGCCAAAAGAAAAAGTAGGAAGAGGCTTAATGCTGCATTTA
GGAATGTCTCCTTTGTATTTACTTTATCTTAATTATGCTGCTTATGTATCCAAATGTATA
GAAATTCCTCTATTCTTCCTACCTGCCAGCTTCTTAAGATGGAAAGTATTAGATCCTATG
ATGTTTTCTACTCAGGGTTCAATAGATGCCGCCGTTTTATCTTTAAAAAGAGGCTGGTCT
ATAAATTTAAGTGGAGGCTATCACCACGCTTGCAGGTAATCTGGAGGCGGATTTTGCATA
TATCCAGACATATGTTTCGCTATAGAATATTTAAGAAAATGTTTTGGCATAAAAAGATGC
ATGATTGTAGATTTAGATGCTCATCAAGGAAATGGACATGAAAGAGATTTTATAGATGAT
AAAGAAAATACATTTATATTAGATTTTTACAATCACAGTATTTATCCAGCAGATACCTTT
GCAGCCAAAGGTATAAGTCTTTCTAAAAACGTAGATTTTGATACATCTGATTCAGAATAT
ATCTCTATGTTGAGAAAGACACTTTAAAAAATTCTTGATTAATTCAAACCTGAGTTTTTA
CTATATAATGCAGGAACTGATTGTCTTGAAGGTGATCGTTTGGGTTAAATGAATCTCTCT
CAAAATTGCATAATTCAGAGAGATTAAGTTGTATTTGAAGAATGCTTAAATAGAGATATA
CCCTTAACTATGGTGCTTTCAGGAGGGTATTAGTAAATAAATGCACCTGTTATAGCTGAC
TCTATTTTAAATCTTGATTAAAATTTAAAAATAAAAAATTACAATAGAAAAAAATTATAA
AACCCATGA>TTHERM_00395710(protein)
MYTLICAVQDLALFGIFITGLVLLEWQIIVFPILIYILIPFLNELVYNCFAKLLFTIEKE
KKRMEQRYSQSELENKYIENLPILYHPSYNITACGIEKLHPFDSVKYGRVFNILKEKGFL
QEQGFYKPKEKVGRGLMLHLGMSPLYLLYLNYAAYVSKCIEIPLFFLPASFLRWKVLDPM
MFSTQGSIDAAVLSLKRGWSINLSGGYHHACRQSGGGFCIYPDICFAIEYLRKCFGIKRC
MIVDLDAHQGNGHERDFIDDKENTFILDFYNHSIYPADTFAAKGISLSKNVDFDTSDSEY
ISMLRKTLQKILDQFKPEFLLYNAGTDCLEGDRLGQMNLSQNCIIQRDQVVFEECLNRDI
PLTMVLSGGYQQINAPVIADSILNLDQNLKIKNYNRKKLQNP>TTHERM_00395710(gene)
ATGTACACACTAATTTGCGCTGTTTAAGATTTAGCTTTATTTGGAATTTTTATTACAGGG
TTGGTCTTATTAGAATGGCAAATAATTGTATTTCCCATTTTAATTTACATCCTCATCCCA
TTTTTAAACGAGTTGGTCTACAATTGCTTTGCTAAATTATTATTCACAATAGAAAAGGAG
AAGAAAAGGATGGAGTAAAGGTATTCTTAATCAGAATTAGAAAATAAATATATTGAAAAT
TTACCTATTTTATACCATCCCTCATACAACATTACAGCTTGTGGGATTGAAAAACTTCAC
CCTTTTGATTCTGTAAAGTATGGAAGAGTTTTTAATATACTCAAAGAAAAAGGATTTCTA
TAAGAATAAGGTTTCTATAAGCCAAAAGAAAAAGTAGGAAGAGGCTTAATGCTGCATTTA
GGAATGTCTCCTTTGTATTTACTTTATCTTAATTATGCTGCTTATGTATCCAAATGTATA
GAAATTCCTCTATTCTTCCTACCTGCCAGCTTCTTAAGATGGAAAGTATTAGATCCTATG
ATGTTTTCTACTCAGGGTTCAATAGATGCCGCCGTTTTATCTTTAAAAAGAGGCTGGTCT
ATAAATTTAAGTGGAGGCTATCACCACGCTTGCAGGTAAACTAAAAGTTTATAAAAAATA
TTAACATACTATTACAAATTTTTGAATAAAATAACAAAATTACATCTAATTATTATGTTT
TTTAACTAAAAATAAATTTCATTTCTGCATCTTTTAACAATTTAAACATCTAAGATACTC
TGAAAAGCAGAAAGTTGCCCTAGAAAATTAAAAAATTTACTCAAAATTTTAAATAAATAA
TTTCAGTAGTGAATTAAGAAACCAATAAAAGCCTAATCAGTATTTATCAATAAAATTATA
AACATCTAATAAAATCTAACATAGCATCAATAGGAATAAAAAGTAACTAGTATAGAAATG
ATTAAATTATAGAGTAAATTTTAAAAAAATAATATAGAAGTATAAAACAGGATTTAATTA
TTAATACAACATTCACCCAATTTATCATCTCCAAAAAATAGTTATTTATTTATTTAATTT
TGATTAGAATAAGTTTTGAAATTCTTTTTTCTTTTATTTAATTTAAATTCGATGTTTATC
GTTTCATTTTATTAAAATTTAGGTAATCTGGAGGCGGATTTTGCATATATCCAGACATAT
GTTTCGCTATAGAATATTTAAGAAAATGTTTTGGCATAAAAAGATGCATGATTGTAGATT
TAGATGCTCATCAAGGAAATGGACATGAAAGAGATTTTATAGATGATAAAGAAAATACAT
TTATATTAGATTTTTACAATCACAGTATTTATCCAGCAGATACCTTTGCAGCCAAAGGTA
TAAGTCTTTCTAAAAACGTAGATTTTGATACATCTGATTCAGAATATATCTCTATGTTGA
GAAAGACACTTTAAAAAATTCTTGATTAATTCAAACCTGAGTTTTTACTATATAATGCAG
GAACTGATTGTCTTGAAGGTGATCGTTTGGGTTAAATGAATCTCTCTCAAAATTGCATAA
TTCAGAGAGATTAAGTTGTATTTGAAGAATGCTTAAATAGAGATATACCCTTAACTATGG
TGCTTTCAGGAGGGTATTAGTAAATAAATGCACCTGTTATAGCTGACTCTATTTTAAATC
TTGATTAAAATTTAAAAATAAAAAATTACAATAGAAAAAAATTATAAAACCCATGA