Identifiers and Description

Gene Model Identifier

TTHERM_01014700

Standard Name

THD4 (Tetrahymena histone deacetylase 4)

Aliases

PreTt04600 | 197.m00074 | 3748.m00310

Description

Histone deacetylase family protein

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

No Data fetched for Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

TetraMine Data

TTHERM_01014700

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_20223.19.997093137033517e-262histone deacetylase (555 aa)
OxytrichaContig2098.0.g38.999979922762958e-79Histone deacetylase domain
SGDYNL021W4.000904604388404e-59HDA1 Putative catalytic subuni
t of a class II histone deacet
ylase complex that also contai
ns Hda2p and Hda3p; Hda1p inte
racts with the Hda2p-Hda3p sub
complex to form an active tetr
amer; deletion increases histo
ne H2B, H3 and H4 acetylation
WormBaseWBGene000183192.000065869309806e-55locus:hda-6 Histone deacetyl
ase 6 status:Confirmed Uni
Prot:Q20296 protein_id:CCD71
098.1
DictyBaseDDB_G02801951.9998323414791308e-36hdaC on chromosome: 3 position
3087742 to 3093065
Stentor CoeruleusSteCoe_358331.462486227251231e-31

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:18178773: Smith JJ, Torigoe SE, Maxson J, Fish LC, Wiley EA (2008) A class II histone deacetylase acts on newly synthesized histones in Tetrahymena. Eukaryotic cell 7(3):471-82
  2. Ref:SUPR000085

Sequences

>TTHERM_01014700(coding)
ATGATGGATGCCAAGGATAAAAAAGTAGGATTTATATATGATGAAAGAATGCTTTTACAT
AAACTCTCTAAGTAGCCTCCTCATCCTGAGTGCCCTGAAAGAATAGAAAAAATAATAGAA
AACTTAAAAAAAACTGGATTATGGAGTTAATTAGATGTAATTAACTAGGTAGAGCCAATT
TAAAAAGATATTTTAAATAAAGTGCACAGAGATTCATATGTAGATTTAGTAGAATAAATG
TGGCCTGAAGGCTGTGAAAAAGAAAACATGGTTTTAAATGGATGTTATTATAATAAGTAC
ACAGGATAAAGTGCTTTTTTGTCATCAGGTGCTGTAATTTAATCAATAGATTTGATCAAA
TCCAAATCTTGGCATACTGCTTTTTGTTGTGTTAGACCGCCTGGACATCACAGTGGAGCT
TCATAGTAGTGTAGTGGATTTTGTTTCTTTAACAATGTTGTTGTGGGAGCCAAGTATTTA
AGAGAAAAATATTCAGTCAAAAAAATAGCAATTTTCGATTTTGATGTACATCATGGAGAC
GGAACTCAAGCTCTTACATACGATGATCATGAATTGTTATTTATAAGTATACATTAGTAT
GATGAAGGAAAATTTTATCCTTTCTAAAGTGGAGATTTAAGTAAAGTAGGAAATGGATTT
AACATTAATATTGGTTGGAACACTTCAAATTTTTAAAGTGCTGGAGATGATGAATACATT
TATGCTTTTGAATCAATTGTAATGCCAGCATTGACTGAATTTTAGCCAGATTTTATATTT
ATTTCTGCCGGATTTGATTCAGCAGCTAACGATAAACTAGGTAGGTGCTAATTGACAAAT
ATAGGATACGAATATATGAGTTCAAGACTAGTATAAATATTTCCTAATTTATTGTTTGTT
TTAGAAGGTGGATATAACCTTGATAGCATATAATGGGCATCAGAAGCTGTTATTAGGAGA
ATTTTGGATCCTTTAAACGAAAAATAACTTGAAAGTTTGAGAAATAACATACTGCCAAAC
TAGATGTCAATAAAAGTAATTAATGAATGTAAGCTGGCTCATAATAAATTTTGGAAATTA
CAAGACAAATACAACATTACAAACATCATAGAAAAAAATTAATTTTTTGGAAAAAGTATA
ATATCAGATTTTAGTAAAAACTTTAAGATAGACAACTTCAATGATAAATTATATTACACT
TTAAATTAAATTGAGATTTAATATTTAGAGAAACCTGAGTTTAGGTAGCTACTTTGGCAT
GGAAATTAAATGAAATAGTTTGGAAATGAAATGCTATTTGAAATTTAAAAAAGTATTGAT
GTGGGTTTTGAGATAAAGATAGTAGGTGAGGATAGTATTATCATAAAAGGAATAAAAACA
AAAGATTTTGAAAATAGATAATTAGATGTAATAAATTAAACAATTCAATATCAATAAAAG
GTTTTTGAACATTTTACAGAATAATTAAAAGAAAAAAAACAAATTATTTATGATTCTATT
AAAAACTAATTAAAAGAAATTTCAAATATTCCAATAAATTCACAGCTAATAATTGATGGA
AGTAATTGCTAAGTGATAATCTCGCACATACCAAACAACAATAGCAATCTGATAAATATC
TAATAAATTTGTGAATAATTATCCTCTTATTTCTATGATTAGGAGAAAAAGTGA


>TTHERM_01014700(protein)
MMDAKDKKVGFIYDERMLLHKLSKQPPHPECPERIEKIIENLKKTGLWSQLDVINQVEPI
QKDILNKVHRDSYVDLVEQMWPEGCEKENMVLNGCYYNKYTGQSAFLSSGAVIQSIDLIK
SKSWHTAFCCVRPPGHHSGASQQCSGFCFFNNVVVGAKYLREKYSVKKIAIFDFDVHHGD
GTQALTYDDHELLFISIHQYDEGKFYPFQSGDLSKVGNGFNINIGWNTSNFQSAGDDEYI
YAFESIVMPALTEFQPDFIFISAGFDSAANDKLGRCQLTNIGYEYMSSRLVQIFPNLLFV
LEGGYNLDSIQWASEAVIRRILDPLNEKQLESLRNNILPNQMSIKVINECKLAHNKFWKL
QDKYNITNIIEKNQFFGKSIISDFSKNFKIDNFNDKLYYTLNQIEIQYLEKPEFRQLLWH
GNQMKQFGNEMLFEIQKSIDVGFEIKIVGEDSIIIKGIKTKDFENRQLDVINQTIQYQQK
VFEHFTEQLKEKKQIIYDSIKNQLKEISNIPINSQLIIDGSNCQVIISHIPNNNSNLINI
QQICEQLSSYFYDQEKK


>TTHERM_01014700(gene)
ATGATGGATGCCAAGGATAAAAAAGTAGGATTTATATATGATGAAAGAATGCTTTTACAT
AAACTCTCTAAGTAGCCTCCTCATCCTGAGTGCCCTGAAAGAATAGAAAAAATAATAGAA
AACTTAAAAAAAACTGGATTATGGAGTTAATTAGATGTAATTAACTAGGTAGAGCCAATT
TAAAAAGATATTTTAAATAAAGTGCACAGAGATTCATATGTAGATTTAGTAGAATGTAAT
TAGTTGTAGCTATTTGATTAGATCTTCTTTTTTCTTTTAGATTAATAAATCATTTCAAAA
TGCTGCTTTAATTATTTATATTAACTCCTACTTAATCATTTTATATAATATTTTATTTTT
TAATTAGAAATGTGGCCTGAAGGCTGTGAAAAAGAAAACATGGTTTTAAATGGATGTTAT
TATAATAAGTACACAGGATAAAGTGCTTTTTTGTCATCAGGTGCTGTAATTTAATCAATA
GATTTGATCAAATCCAAATCTTGGCATACTGCTTTTTGTTGTGTTAGGTTTAATATTTAT
TTTTTTATATTGAAAATAATTGGGATTTGATTTATAATTTAAAATTTGAAATTAAAATTA
AGACCGCCTGGACATCACAGTGGAGCTTCATAGTAGTGTAGTGGATTTTGTTTCTTTAAC
AATGTTGTTGTGGGAGCCAAGTATTTAAGAGAAAAATATTCAGTCAAAAAAATAGCAATT
TTCGATTTTGATGTACATCATGGAGACGGAACTCAAGCTCTTACATACGATGATCATGAA
TTGTTATTTATAAGTATACATTAGTATGATGAAGGTATTTATTATGAGATAAATCTAACA
AATTAAATTTGCATTATTTATAAATATATAGGAAAATTTTATCCTTTCTAAAGTGGAGAT
TTAAGTAAAGTAGGAAATGGATTTAACATTAATATTGGTTGGAACACTTCAAATTTTTAA
AGTGCTGGAGATGATGAATACATTTATGCTTTTGAATCAATTGTAATGCCAGCATTGACT
GAATTTTAGCCAGATTTTATATTTATTTCTGCCGGATTTGATTCAGCAGCTAACGATAAA
CTAGGTAGGTGCTAATTGACAAATATAGGATACGAGTAAAATTTAAACAAAAGTCTATTT
TTACTTTAAATAATTATATTTATTATTATTTATAGATATATGAGTTCAAGACTAGTATAA
ATATTTCCTAATTTATTGTTTGTTTTAGAAGGTGGATATAACCTTGATAGCATATAATGG
GCATCAGAAGCTGTTATTAGGAGAATTTTGGATCCTTTAAACGAAAAATAACTTGAAAGT
TTGAGAAATAACATACTGCCAAACTAGATGTCAATAAAAGTAATTAATGAATGTAAGCTG
GCTCATAATAAATTTTGGAAATTACAAGACAAATACAACATTACAAACATCATAGAAAAA
AATTAATTTTTTGGAAAAAGTATAATATCAGATTTTAGTAAAAACTTTAAGATAGACAAC
TTCAATGATAAATTATATTACACTTTAAATTAAATTGAGATTTAATATTTAGAGAAACCT
GAGTTTAGGTAGCTACTTTGGCATGGAAATTAAATGAAATAGTTTGGAAATGAAATGCTA
TTTGAAATTTAAAAAAGTATTGATGTGGGTTTTGAGATAAAGATAGTAGGTGAGGATAGT
ATTATCATAAAAGGAATAAAAACAAAAGATTTTGAAAATAGATAATTAGATGTAATAAAT
TAAACAATTCAATATCAATAAAAGGTTTTTGAACATTTTACAGAATAATTAAAAGAAAAA
AAACAAATTATTTATGATTCTATTAAAAACTAATTAAAAGAAATTTCAAATATTCCAATA
AATTCACAGCTAATAATTGATGGAAGTAATTGCTAAGTGATAATCTCGCACATACCAAAC
AACAATAGCAATCTGATAAATATCTAATAAATTTGTGAATAATTATCCTCTTATTTCTAT
GATTAGGAGAAAAAGTGA