Identifiers and Description
Gene Model Identifier
TTHERM_00663840Standard Name
THD3 (Tetrahymena histone deacetylase 3)Aliases
PreTt23831 | 98.m00174 | 3736.m00072 | THD3Description
THD3 class I histone deacetylase family protein; Histone deacetylase family proteinGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
No Data fetched for Gene Ontology Annotations
Domains
- ( PF00850 ) Histone deacetylase family
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10%
TetraMine Data
TTHERM_00663840
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_17202.1 9.997093137033517e-262 histone deacetylase (473 aa)
DictyBase DDB_G0268024 2.000851114308011e-136 hdaA on chromosome: 1 position
1320084 to 1322172
WormBase WBGene00001834 2.9988601762256104e-132 locus:hda-1 Histone deacetyl
ase 1 status:Confirmed Uni
Prot:O17695 protein_id:CAB03
984.1
SGD YNL330C 3.999751664085691e-132 RPD3 Histone deacetylase; regu
lates transcription, silencing
, and other processes by influ
encing chromatin remodeling; f
orms at least two different co
mplexes which have distinct fu
nctions and members
Oxytricha Contig1866.0.g68 5.0014192254601655e-126 Histone deacetylase domain
Stentor Coeruleus SteCoe_31554 1.1677812485237086e-60
General Information
No Data fetched for General Information
Associated Literature
- Ref:18178773: Smith JJ, Torigoe SE, Maxson J, Fish LC, Wiley EA (2008) A class II histone deacetylase acts on newly synthesized histones in Tetrahymena. Eukaryotic cell 7(3):471-82
- Ref:SUPR000083
Sequences
>TTHERM_00663840(coding)
ATGGAAACAAAAAAAAGAGTAGCTTATTTTTACAATAACGAAATAGGTAACTACAACTAT
GGAAAGTTGCATTTAATGAACCCAAAAAGAATTTCAATGACTCATTCCTTGATTGTAGGT
TATGGTGTCTATAAAGATCTTGACGTATACACAACAAGAGAAGCCACCAAAGAAGAGATA
ATGCAGTTTCATGATTAGGATTATGTTGAGTACCTTTCTAACTATGTATCGAGTACTAAA
ATAGATTTTCTAAGAAAGAATGGATGCACTGCTCCTATCATAGATGAGGAAGCTAAAAAT
GATGTAGAAAAAAAGAGATAATATGGCATAGATGTTCAAGCTGATTGTCCTGGCTTTGAT
GGTGTCTATACCTTTAGCCAACTTTCAACAGGTGGTTCGATTGATGCAGCTCACTTAATT
ATAAATAATGCTGCAGATGTAGCTATTAACTGGGGTGGTGGATTGCATCATGCTAAGAAG
GGAGAAGCTTATGGCTTCTGTTATGTTAATGATATAGTAATATGCATTTTGGAGCTTTTA
AAAGTATTTCCTCGTGTGCTTTACATAGATATAGATGTACACCATGGAGATGGCGTAGAA
GAGGCTTTCTTTACTACAAATAGAGTAATGACAGTTAGTTTTCATGAATTTGGAGAAGAT
TTCTTTCCTGGAACAGGTGGCCTCAACAGTAGTGGAGAAGGATTGGGCAAAAATTATGCT
GTGAATGTACCACTTAGACCTGGTATGGATGATGAAAGTTATAAATAACTATTTAAAAAT
GTAATGAATAAAGTAATGGAAGTGTTTAGACCTGACGTAGTTGTATTCTAAACTGGAGCT
GATAGTTTAGCTAATGACAAAATTGGGCATTTTAATTTATCTATTAGAGGACATGGCGAA
TGCTTGACTTACATGCTAAGGTTTAATGTTCCTGTAGTAGTTTTAGGAGGAGGTGGATAT
ACTATTTAAAATGTAAGTCGTTGCTGGGCATATGAAACAGGATTACTTGTTAAAAAAAAT
TTAAATGGACCTATACCTGTTGATGATCCCTTTTTCCATTTATATGAAAAATAGAATATG
CTTCACGTTCCAATTTAGCAAGTAGAAAATAAGAATAGTAAAGAAGATTTAAATAAAATA
TAAGAAGAGGTCTTTAAGCAACTAAAAGAAGTAGATGCTGCCCCATCAATACCTTTTCAT
AATGTTCCCAAAGCATTCTAGTATGATGACGATGAATATTTCGAGGAAAATGAATAAGAT
TAACATCATGATTTTTCTGGAAATACTTATAATTTCAATAAGCTTAATGACTATATAAAC
GGATATTAAACAATGGAGGTCGAATAAAATGAAGAAGTTGGAGTATATAGAAAACAACCT
CTATTAATAGAAAAGAATAGTAGTAGATTTAATCATATTTGA>TTHERM_00663840(protein)
METKKRVAYFYNNEIGNYNYGKLHLMNPKRISMTHSLIVGYGVYKDLDVYTTREATKEEI
MQFHDQDYVEYLSNYVSSTKIDFLRKNGCTAPIIDEEAKNDVEKKRQYGIDVQADCPGFD
GVYTFSQLSTGGSIDAAHLIINNAADVAINWGGGLHHAKKGEAYGFCYVNDIVICILELL
KVFPRVLYIDIDVHHGDGVEEAFFTTNRVMTVSFHEFGEDFFPGTGGLNSSGEGLGKNYA
VNVPLRPGMDDESYKQLFKNVMNKVMEVFRPDVVVFQTGADSLANDKIGHFNLSIRGHGE
CLTYMLRFNVPVVVLGGGGYTIQNVSRCWAYETGLLVKKNLNGPIPVDDPFFHLYEKQNM
LHVPIQQVENKNSKEDLNKIQEEVFKQLKEVDAAPSIPFHNVPKAFQYDDDEYFEENEQD
QHHDFSGNTYNFNKLNDYINGYQTMEVEQNEEVGVYRKQPLLIEKNSSRFNHI>TTHERM_00663840(gene)
ATGGAAACAAAAAAAAGAGTAGCTTATTTTTACAATAACGAAATAGGTAACTACAACTAT
GGAAAGTTGCATTTAATGAACCCAAAAAGAATTTCAATGACTCATTCCTTGATTGTAGGT
TATGGTGTCTATAAAGATCTTGACGTATACACAACAAGAGAAGCCACCAAAGAAGAGATA
ATGCAGTTTCATGATTAGGATTATGTTGAGTACCTTTCTAACTATGTATCGAGTACTAAA
ATAGATTTTCTAAGAAAGAATGGATGCACTGCTCCTATCATAGATGAGGAAGCTAAAAAT
GATGTAGAAAAAAAGAGATAATATGGCATAGATGTTCAAGCTGATTGTCCTGGCTTTGAT
GGTGTCTATACCTTTAGCCAACTTTCAACAGGTAATAAATTATATTTCCATTTTGAACAA
GAATTTGAGTTAGTTGGATTTACAGTTTTCAAAATATATACTAGAAAAAATTTACTTGCT
TAAATCTTCTCCTTCTATTTAAAGAATTTGAGTAGAAGAAAGTAATAAATATTCAATAAA
TAATTAATTATTATCCTAGAAAATGGTGAAAAATAATAGTTAAACACAATTTCAAAAAAA
ATTATTTTTAACCCAAATTTATATTTTAAAATATTTAAAAAATATTCATTTTAGTAAAAA
TAAAATTTAAATTTAATATCTTAATATTTTTTTTCTTTAAACCATAATTAGGTGGTTCGA
TTGATGCAGCTCACTTAATTATAAATAATGCTGCAGATGTAGCTATTAACTGGGGTGGTG
GATTGCATCATGCTAAGAAGGGAGAAGCTTATGGCTTCTGTTATGTTAATGATATAGTAA
TATGCATTTTGGAGCTTTTAAAAGTATTTCCTCGTGTGCTTTACATAGATATAGATGTAC
ACCATGGAGATGGCGTAGAAGAGGCTTTCTTTACTACAAATAGAGTAATGACAGTTAGTT
TTCATGAATTTGGAGAAGATTTCTTTCCTGGAACAGGTGGCCTCAACAGTAGTGGAGAAG
GATTGGGCAAAAATTATGCTGTGAATGTACCACTTAGACCTGGTATGGATGATGAAAGTT
ATAAATAACTATTTAAAAATGTAATGAATAAAGTAATGGAAGTGTTTAGACCTGACGTAG
TTGTATTCTAAACTGGAGCTGATAGTTTAGCTAATGACAAAATTGGGCATTTTAATTTAT
CTATTAGAGGACATGGCGAATGCTTGACTTACATGCTAAGGTTTAATGTTCCTGTAGTAG
TTTTAGGAGGAGGTGGATATACTATTTAAAATGTAAGTCGTTGCTGGGCATATGAAACAG
GATTACTTGTTAAAAAAAATTTAAATGGACCTATACCTGTTGATGATCCCTTTTTCCATT
TATATGAAAAATAGAATATGCTTCACGTTCCAATTTAGCAAGTAGAAAATAAGAATAGTA
AAGAAGATTTAAATAAAATATAAGAAGAGGTCTTTAAGCAACTAAAAGAAGTAGATGCTG
CCCCATCAATACCTTTTCATAATGTTCCCAAAGCATTCTAGTATGATGACGATGAATATT
TCGAGGAAAATGAATAAGATTAACATCATGATTTTTCTGGAAATACTTATAATTTCAATA
AGCTTAATGACTATATAAACGGATATTAAACAATGGAGGTCGAATAAAATGAAGAAGTTG
GAGTATATAGAAAACAACCTCTATTAATAGAAAAGAATAGTAGTAGATTTAATCATATTT
GA