Identifiers and Description

Gene Model Identifier

TTHERM_00859330

Standard Name

THD10 (Tetrahymena histone deacetylase 10)

Aliases

PreTt09095 | 152.m00115

Description

Sir2-like histone deacetylase

Genome Browser (Macronucleus)

GBrowse

Genome Browser (Micronucleus)

GBrowse

Gene Ontology Annotations

Molecular Function

Biological Process

Domains

  • ( PF02146 ) transcriptional regulator, Sir2 family

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 23.4%

TetraMine Data

TTHERM_00859330

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_07219.18.997766383757294e-176transcriptional regulator, Sir
2 family protein (285 aa)
OxytrichaContig5479.0.g781.0004460510701209e-64Sir2 family
Stentor CoeruleusSteCoe_218693.975449735908647e-31
DictyBaseDDB_G02839170.000000000006001570085597868sir2A on chromosome: 4 positio
n 1272110 to 1273864
WormBaseWBGene000048000.00000000009001903211590313locus:sir-2.1 status:Partial
ly_confirmed UniProt:D3YT50
protein_id:CBK19468.1
SGDYPL015C0.000000019990673443141236HST2 Cytoplasmic member of the
silencing information regulat
or 2 (Sir2) family of NAD(+)-d
ependent protein deacetylases;
modulates nucleolar (rDNA) an
d telomeric silencing; possess
es NAD(+)-dependent histone de
acetylase activity in vitro

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:18178773: Smith JJ, Torigoe SE, Maxson J, Fish LC, Wiley EA (2008) A class II histone deacetylase acts on newly synthesized histones in Tetrahymena. Eukaryotic cell 7(3):471-82
  2. Ref:SUPR000182

Sequences

>TTHERM_00859330(coding)
ATGCAAACCAATTTACATCAACTAATTGCTAAAAGAATTCAAAGCGCAAGCTGTCTTATT
ATCACAGCAGGAGCAGGAATGGGTGTAGATTCAGGACTTCCAGATTTTAGGGGGAAAGAA
GGATTTTGGAACAATTACATTCCTTTTAGGAATAAATTCTCTTTCACTGAGTGTGCTAAT
CCATAATTTTTATTAGATCATCCAAATTTATTTTGGGGGTTTTATGGACACAGACTCCAT
TTATATAGAGAAACACAACCTCACAAAGGTTTTGGAATGTTAAAAACTTGGAGTTAAAAT
AAAAAAAGTTTTGTACTCACCTCAAATGTTGATGGACATTTCTAAAAAGCAGGATTTGAT
AATAAGAGTGTTTATGAAGTTCATGGCTCAATTAATTTTATGCAATGCACAAGCTGTTAA
AGAATTTATTCAGCAGATGGATACAATATTATTTATGATATGAATACATTTGAGGCTAAA
GATCCACTTCCTAATTGTAAGAATTGTGTAAATGTTATAGTACGTCCTAATATTTTGATG
TTTGGGGATTACTCTTTTATGTCAGATAGAGTTGAAGAATAAGAAGATAGGTATCTGTAG
TTTAAAAATCAATTAACTACATAAGATAGAATTATTGTTTTAGAATTTGGAGCAGGGGAA
GCTGTTGCAACTATAAGGATGATGGGCGAAGAATTATTCTTAAAATACAAGCATATAACA
TTCATAAGAGTTAATCCAAGAGATGATAATTCTCCTTTTGGTTGGAAGTAATAGTAAAAT
ACAGAAGATAAAGCTTTTTATGCATTAAAATAAGGGGCTCTTGAAGCAATAACATAAATC
TAATAATATATGTTGTGA


>TTHERM_00859330(protein)
MQTNLHQLIAKRIQSASCLIITAGAGMGVDSGLPDFRGKEGFWNNYIPFRNKFSFTECAN
PQFLLDHPNLFWGFYGHRLHLYRETQPHKGFGMLKTWSQNKKSFVLTSNVDGHFQKAGFD
NKSVYEVHGSINFMQCTSCQRIYSADGYNIIYDMNTFEAKDPLPNCKNCVNVIVRPNILM
FGDYSFMSDRVEEQEDRYLQFKNQLTTQDRIIVLEFGAGEAVATIRMMGEELFLKYKHIT
FIRVNPRDDNSPFGWKQQQNTEDKAFYALKQGALEAITQIQQYML


>TTHERM_00859330(gene)
ATGCAAACCAATTTACATCAACTAATTGCTAAAAGAATTCAAAGCGCAAGCTGTCTTATT
ATCACAGCAGGAGCAGGAATGGGTGTAGATTCAGGACTTCCAGATTTTAGGGGGAAAGAA
GGTATTAGAATATAATCTCCACAAAATGCATAATATTTTTAGTTACATTTTTTTTTAATT
TTAGGATTTTGGAACAATTACATTCCTTTTAGGAATAAATTCTCTTTCACTGAGTGTGCT
AATCCATAATTTTTATTAGAGTATTTTTATTAGTTAAATGATATATCTACATTTTTATTT
ATTTTGGTATAAACTAGTCATCCAAGTAATCAAATATTAACTAGCATACAATATTTGACT
TTTTCATCATTAAATTGAAGATTTATTTTGGGGGTTTTATGGACACAGACTCCATTTATA
TAGAGAAACACAACCTCACAAAGGTTTTGGAATGTTAAAAACTTGGAGTTAAAATAAAAA
AAGTTTTGTACTCACCTCAAATGTTGATGGACATTTCTAAAAAGCAGGTAAATTTATTAT
TTTATATTACATTATTGAGTTTTTAAGCTATTTTATATGTAAATTTGTTTAAAATAATGA
ATTTTAGGATTTGATAATAAGAGTGTTTATGAAGTTCATGGCTCAATTAATTTTATGCAA
TGCACAAGCTGTTAAAGAATTTATTCAGCAGATGGTAAATATCATTAAAATCTATCTATC
TATAAACCGTAACTGCTTCGATATATCTGAGCCAAGGACACCATTTTTTATTTGACCATT
TCTTTCATTAACAACCTCCCTCCCTCTCGGCTTTAATTTTAAGATGAATTGGAGGAGCAG
AGTTTTTAAGGTATGAATTTTATATCTCTATTTATATCTAAAGGATACAATATTATTTAT
GATATGAATACATTTGAGGCTAAAGATCCACTTCCTAATTGTAAGAATTGTGTAAATGTT
ATAGTACGTCCTAATATTTTGATGTTTGGGGATTACTCTTTTATGTCAGATAGAGTTGAA
GAATAAGAAGATAGGTATCTGTAGTTTAAAAATCAATTAACTACATAGTAATAATTGAAT
AAATTAATATTAAATATTAACTTATGTTTTATTTTTTATTTAAAGAGATAGAATTATTGT
TTTAGAATTTGGAGCAGGGGAAGCTGTTGCAACTATAAGGATGATGGGCGAAGAATTATT
CTTAAAATACAAGTAAAAATAAATAAAACTCAAATTGATATATTTATCTTTTTTAAAATT
TAGGCATATAACATTCATAAGAGTTAATCCAAGAGATGATAATTCTCCTTTTGGTTGGAA
GTAATAGTAAAATACAGAAGATAAAGCTTTTTATGCATTAAAATAAGGGGCTCTTGAAGC
AATAACATAAATCTAATAATATATGTTGTGA