Identifiers and Description
Gene Model Identifier
TTHERM_00152050Standard Name
TFB2 (RNA polymerase II transcription factor B subunit 2)Aliases
PreTt20863 | 12.m00537 | 3700.m00256Description
TFB2 general transcription factor IIH subunit; general transcription factor IIH subunit 2Genome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Molecular Function
- zinc ion binding (IEA) | GO:0008270
Biological Process
- regulation of transcription (IEA) | GO:0045449
- DNA repair (IEA) | GO:0006281
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.5%
TetraMine Data
TTHERM_00152050
WebApollo
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Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_05153.1 9.997093137033517e-262 transcription factor ssl1 fami
ly protein (375 aa)
DictyBase DDB_G0272362 4.998233068678632e-48 gtf2h2 on chromosome: 2 positi
on 1296713 to 1298183
Oxytricha Contig14857.0.g41 9.997441244797434e-45 Ssl1-like
WormBase WBGene00011814 5.000680012816624e-42 General transcription factor I
IH subunit 2 status:Confirme
d UniProt:P34567 protein_i
d:CAA83139.3
SGD YLR005W 1.999683289470905e-41 SSL1 Component of the core for
m of RNA polymerase transcript
ion factor TFIIH, which has bo
th protein kinase and DNA-depe
ndent ATPase/helicase activiti
es and is essential for transc
ription and nucleotide excisio
n repair; interacts with Tfb4p
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00152050(coding)
ATGGATATTGAAGAAGCAGATAGAAGATCAATTATTGATTTCGTAGAATAAAAACTAAAT
ATTAAAGAAGAAAATCCTTTAATACAAACAAAGAAAATCATCGATAAAGGATATACCTCT
ACAACAAAAAAGAGTCTCCTAAGATTTGTATATATTATAGTTGATACAACCTAATCTTCT
ACAAGAGTAGATTTCAAGCCTTCGAGAATAGGACTAACGTAAATCTACTTAAAGAACTTC
ATAAAAAACTTTTTTGATTCTAATCCTTTGAGTGTATTATCTATTGGTAAAACATAAAAT
GGCTAGTGTATAACTCTTTAAGAATTTACATCTAGTATATCTCTTTTAGATAAAACAATC
GAAAAACTTGTAGTTGATGAAAAGGAGGATTTTTCTCTTTTTGAATGTTTAAATGAAACT
TTTAATATTTTTGCTGAAGCACCTCCATATGCTTTCAGAGAAGTAGTTCTAATTTAGTCA
ACACCTTCAACAAAAGATAAAGGTGATATAAATGAATAAATAAATAAAGCCAAATAATGC
AAAATAACTTTTAATATTATATCACTTAATGCAAAAACATTCATATTTTAGAAATTGACA
AAAGAGACATAAGGTAAATATGACACAGCTTTACATGAAAAAGATTATGAAAATTTACTT
AACAGCTATTGTGAACCTCCATAATAAATATTAAATAAAACTGAAAAAACTCTTATACAA
GTTGGTTTCCCTAATAAAAAATATTCTAAAATTTCTGTATTATGTGCTTGCCATATGGAG
TTAAAAACTAACTTTTACATTTGCCCTTAATGCAAAAGTAAAAACTGTGAAGTTCCTTCA
AAATGTTCAGGATGCCAATTAAATTTAATTCTTCCTTTGCATATCACAAAGAGCTATCAT
TTTAGTTAAAATTTAAAAGAATTCGAATTGTTAGGACAAGAAAAATCTAATAATAGTATG
GAAACCGAGTAAGATAAAACATAAAATATCCTTTGTAATGGATGCTCTGAAGATATTAAA
GAAGATTACTTCTCAAAATGTTAAAATTGTAAATCAATATTCTGCTTGGAATGTGATATT
TTAATACACAAGCAAAAGCTAAATTGTCCTAAATGTTGA>TTHERM_00152050(protein)
MDIEEADRRSIIDFVEQKLNIKEENPLIQTKKIIDKGYTSTTKKSLLRFVYIIVDTTQSS
TRVDFKPSRIGLTQIYLKNFIKNFFDSNPLSVLSIGKTQNGQCITLQEFTSSISLLDKTI
EKLVVDEKEDFSLFECLNETFNIFAEAPPYAFREVVLIQSTPSTKDKGDINEQINKAKQC
KITFNIISLNAKTFIFQKLTKETQGKYDTALHEKDYENLLNSYCEPPQQILNKTEKTLIQ
VGFPNKKYSKISVLCACHMELKTNFYICPQCKSKNCEVPSKCSGCQLNLILPLHITKSYH
FSQNLKEFELLGQEKSNNSMETEQDKTQNILCNGCSEDIKEDYFSKCQNCKSIFCLECDI
LIHKQKLNCPKC>TTHERM_00152050(gene)
ATGGATATTGAAGAAGCAGATAGAAGATCAATTATTGATTTCGTAGAATAAAAACTAAAT
ATTAAAGAAGAAAATCCTTTAATACAAACAAAGAAAATCATCGATAAAGGATATACCTCT
ACAACAAAAAAGAGTCTCCTAAGATTTGTATATATTATAGTTGATACAACCTAATCTTCT
ACAAGAGTAGATTTCAAGCCTTCGAGAATAGGACTAACGTAAATCTACTTAAAGGTAATA
ATATTGCATTCAAAATTTTTAATTTATAAAAAATTAATATTATTTTTAATATTAATTAGA
ACTTCATAAAAAACTTTTTTGATTCTAATCCTTTGAGTGTATTATCTATTGGTAAAACAT
AAAATGGCTAGTGTATAACTCTTTAAGAATTTACATCTAGTATATCTCTTTTAGATAAAA
CAATCGAAAAACTTGTAGTTGATGAAAAGGAGGATTTTTCTCTTTTTGAATGTTTAAATG
TAAATTTATAAATTTCTTTTGAATGTTTGTGAATAAAATATTTTTTAAGACCAAATCTTT
ATCTAAAAAACATTTAAAATAAAGGAAACTTTTAATATTTTTGCTGAAGCACCTCCATAT
GCTTTCAGAGAAGTAGTTCTAATTTAGTCAACACCTTCAACAAAAGATAAAGGTGATATA
AATGAATAAATAAATAAAGCCAAATAATGCAAAATAACTTTTAATATTATATCACTTAAT
GCAAAAACATTCATATTTTAGGTAAATAGATTTTAAATTTATACATTGCACAAACCATGC
AAAACTCTATATTTAATAGAAATTGACAAAAGAGACATAAGGTAAATATGACACAGCTTT
ACATGAAAAAGATTATGAAAATTTACTTAACAGCTATTGTGAACCTCCATAATAAATATT
AAATAAAACTGAAAAAACTCTTATACAAGTTGGTTTCCCTAATAAAAAATATTCTAAAAT
TTCTGTATTATGTGCTTGCCATATGGAGTTAAAAACTAACTTTTACATTTGCCCTTAATG
CAAAAGTAAAAACTGTGAAGTTCCTTCAAAATGTTCAGTAACTAATTTTTTAGAATTTTT
AAAAATTTACAAGTTTTTATTAAATTTACTAATAAGGGATGCCAATTAAATTTAATTCTT
CCTTTGCATATCACAAAGAGCTATCATTTTAGTTAAAATTTAAAAGAATTCGAATTGTTA
GGACAAGAAAAATCTAATAATAGTATGGAAACCGAGTAAGATAAAACATAAAATATCCTT
TGTAATGGATGCTCTGAAGATATTAAAGAAGATTACTTCTCAAAATGTTAAAATTGTAAA
TCAATATTCTGCTTGTAAATTAATTGTTTTATTCACACAAGCAACTTTTTAACAATTTTT
TAACTAAATTTTATAGGGAATGTGATATTTTAATACACAAGCAAAAGCTAAATTGTCCTA
AATGTTGA