Identifiers and Description

Gene Model Identifier

TTHERM_00046120

Standard Name

SUB1 (transcriptional coactivator SUB1)

Aliases

PreTt11091 | 3.m01995 | 3824.m02852

Description

SUB1 RNA polymerase II transcriptional coactivator putative; RNA polymerase II transcriptional coactivator p15 (PC4); involved in transcriptional coactivation of RNA polymerase II; localizes to transcriptionally-active nucleus

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• macronucleus (IDA) | GO:0031039 | Ref:SUPR000126
• micronucleus (IDA) | GO:0031040 | Ref:SUPR000126

Molecular Function

• transcription coactivator activity (IEA) | GO:0003713
• DNA binding (IEA) | GO:0003677

Biological Process

• regulation of transcription, DNA-templated (IEA) | GO:0006355

Domains

No Data fetched for Domains

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.4%

TetraMine Data

TTHERM_00046120

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_01838.1	6.002397656030775e-43	RNA polymerase II transcriptio nal coactivator (86 aa)
WormBase	WBGene00011743	0.00000000000040012475857291343	Putative RNA polymerase II tra nscriptional coactivator sta tus:Confirmed UniProt:Q94045 protein_id:CAB03353.1
Oxytricha	Contig2932.0.g32	0.000000000010004361180063202	Transcriptional Coactivator p1 5 (PC4)
SGD	YMR039C	0.000000009996807949091551	SUB1 Transcriptional coactivat or, facilitates elongation thr ough factors that modify RNAP II; role in peroxide resistanc e involving Rad2p; role in the hyperosmotic stress response through polymerase recruitment at RNAP II and RNAP III genes
DictyBase	DDB_G0275335	0.00000005001214305021125	DDB_G0275335 on chromosome: 2 position 5382119 to 5382860

General Information

No Data fetched for General Information

Associated Literature

1. Ref:SUPR000126

Sequences

>TTHERM_00046120(coding)
ATGAGTGACAACGAAGAAAAAAAGGAAGTTAAGCCCATAAAAGGTGACGATGGCAGTTTA
TACTTTGAGCTTGATGACAAAAAAAGAGTTACTGTAAGAAAATTTAAAGGTAAATTATAT
GTTGACATCAGAGAGTTTTATGAAAAAGATGGTGAAATGCTTCCTGGAAAAAAAGGTATT
TCCTTAAATTTATAAAATTGGGAACAATTCAGAAGCTTAATTGACAGTATTGATTAATGC
ATAACTGATATTTGA

>TTHERM_00046120(protein)
MSDNEEKKEVKPIKGDDGSLYFELDDKKRVTVRKFKGKLYVDIREFYEKDGEMLPGKKGI
SLNLQNWEQFRSLIDSIDQCITDI

>TTHERM_00046120(gene)
ATGAGTGACAACGAAGAAAAAAAGGAAGTTAAGCCCATAAAAGGTGACGATGGCAGTTTA
TACTTTGAGGTATCTTAAATTAATAACAGTTAATACTTCATATATATAACTTAAATATTT
TTTTTATAAAGCTTGATGACAAAAAAAGAGTTACTGTAAGAAAATTTAAAGGTAAATTAT
ATGTTGACATCAGAGAGTTTTATGAAAAAGATGGTGAAATGCTTCCTGGAAAAAAAGGTA
TAATAAAATACTATTAAATTGTATTAAATTCATTTGGAAAATGTATTGATTAACATCTTA
TTTATTTAGGTATTTCCTTAAATTTATAAAATTGGGAACAATTCAGAAGCTTAATTGACA
GTATTGATTAATGCATAACTGATATTTGA