Identifiers and Description

Gene Model Identifier

TTHERM_00028580

Standard Name

SPT5 (SuPpressor of Ty's)

Aliases

PreTt14188 | 2.m02223 | 3825.m02581

Description

SPT5 transcription elongation factor spt5; KOW motif family protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

No Data fetched for Domains

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.7%

TetraMine Data

TTHERM_00028580

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_00759.1	9.997093137033517e-262	KOW domain-containing protein family protein (775 aa)
Oxytricha	Contig17111.0.g19	1.0003081162615753e-33	Early transcription elongation factor of RNA pol II, NGN sec tion
WormBase	WBGene00005015	1.9994498063102785e-22	locus:spt-5 Transcription el ongation factor SPT5 status: Confirmed UniProt:Q21338 p rotein_id:CAA92685.1
SGD	YML010W	1.9994498063102785e-22	SPT5 Protein involved in regul ating Pol I and Pol II transcr iption and pre-mRNA processing ; forms a complex with Spt4p; contains a C-terminal repeat d omain that is a target for pho sphorylation by Sgv1p
DictyBase	DDB_G0287661	7.996041293534585e-17	spt5 on chromosome: 5 position 473577 to 477073
Stentor Coeruleus	SteCoe_6661	0.00000000003775134544279098

General Information

No Data fetched for General Information

Associated Literature

1. Ref:26688337: Kataoka K, Mochizuki K (2015) Phosphorylation of an HP1-like Protein Regulates Heterochromatin Body Assembly for DNA Elimination. Developmental cell 35(6):775-88

Sequences

>TTHERM_00028580(coding)
ATGAGTGAGGATGATTTTTTAGAAGAAGATAACAACTCATATAATTATGATGATGAAGAA
GATGGTTCATATGGGGAAGAAGTTTCTAATGCTAAAAGAAAGGGCAAAACTCTGAAATAG
AATAAGAAAAAAAAATAGAAAAAAAATTAATTCTTCGAAGAAGATGCCGAAGAAAGTAAC
GGAGAAGAGGAAGAAGAAGTCAACCAGGAAAAGAGATTAAGAAATTAAGGAGATGCTAAT
TTGTATAGGTAGCGTAAAGCAAGAGATATGAGTGAAGTCATTCATGACCTCGAGCAGAGA
GGTGATTAAACTCCACCCCAAATGGATGATTTGGACTTTGATGATATAGATATGGAGCAC
ATGCCTGAAAATATCAGAAAATATGGTATCTAATAGAGAAAAGATTAAAATATTTTCAGT
GTTCCAGTCAGAAAAACCAAAGAAAAAGAAGTTGTTATTTGTCTACTAAATAAATATGCT
CAACTAAATCCTGAGCAAAATTATGGAATTTATTCTATTTCATATGTTCCTTCAGTTGAA
TCTCTAATTTATATTGAAGGTGTTAACAAAAGAGCAGTCATAAATTTCTTGGATAAATAT
CCTGACTGTAACTGCAACAAAATTGAATTAGTCAACATTGAGGAGTTTTAAGCCATATTC
GAAGACTAGGGCAAAGAGCAAGAATCATATAACGCAGAAGTTGGCTAGTTTGTTAGAATT
AGTCGTAAAGCAAGAAACTCTGACTACATCAACGATATAGGTTAGATCCACTTTATCAAA
AAGAATAATAGGGTTGTCGTCAAATTGATTCCTAGAGTTAGAATTGAGGATATGAGAAAG
AAATATGAACAAATGAATAAAAATAGTAAAAAGAGAAATCAAGATAGCTTTGTTTAAGTT
GAAGGTGATGCTGAGGACGATTAGGCAAACAAGAAGGGTAAATTCCCTTACAACAAATTT
GGAAATCAGCCTGTAGTTCCAACAAGAACAGTTGATGAAATTCTAAAGACCAGACCAGAA
TAGCAATTCTTTTCTTTAGATGAATATGAAAAAGATTGGTCAGAATGCTATAAAGCTGTT
AGTGAAGAATATAGACCAGAAAATGAGTCAACAAATCTTTTCTAACATTGTGGTTATGTT
TATAAAACATTCAATTGCAAAGACCTTATCTTCAATGAATAGCTCAAGAGTCTTGAAGAA
CTCAAAAAGTTTTATCCTCACTTAGAACTAGACGAAATTATGAATCAGAACGGCAGATTT
TTAAAAATGGCCAACAATCAAACTACTTTCGTTGTTGGAGACCCTGTTTTAATTGACAAC
ACTCTTAAGGGAAAAATCATTTCCCTTGGAAAAGAAACAGCTAAAGTTTTAATTAAAAAG
AAAAAGCTATCCATAGAAGAAGAGTATCCATTGAAATAGCTCGTTAAGTATTTTGAAGAT
GGATCAAGAGTCAAAGTAATCTCAGGTACAAGCGAAGGAATAACTGGTACGGTTTTAAGC
ACAAAAGGTGATGTGTGTGAAGTTTTTACAGATAATAATAATACTATTGAAGTTAGAACA
AAAGATCTAGCTATAACAGGTGAAGCAAGTTAAGATGCAGAAAAAATTGTAGTTAATGAA
AGTAGTGATAGAAATCTTGGCCTTAAGAAAAAAGATTTAGTGAAACTTACTGGTTTCAAT
AATGTAGGACTTATCCTTGACATCTCTAAAGATTATATTAAGATTCTAGATCAAAATGGC
AAAATCAAAAACGTCAGCTCTTTTTCCATAAACACAAAAATAGACACAAGAAAATATATT
GGTAAAAACGCAGAGGGAAATAACATCACTAATAACTCCAATATTATTATCAAGCAAGGA
TAATACTCAGGATATCAATGTTAAGTCATTCATGTCTACAAGTCATTAGTTTTCTTATTT
AATCCAAAATTCAGAGACACATACACTGTAGAAAACATAAACAACGTCTCTCTACAAACA
ACTAATCCAGTTATTTAGAGATAAGAAGCTAAAATTGCCTACGATATGAAATATGGTAAG
TAAGACAACTTAAAACCAGATGATATGAAGTAGTATGTTGGTAGACAGATGAGAATTATA
GGAGGTAAATATAAGGGATTTTAATGCACTGTTACTGATATTAGAAATGACTAAATTAAG
GTTGAGATTAACTCAAAGTTTATTACTGTCTTCATTCCTAAGTGCGATCTTATAGCTACT
GATAAAGGCTAAACAGAATTAGAGTATGGTAAGACTCCAAGCTATAACGCTCAAAGCATC
TATTAGCCAAACAATCATGAAAACATAAACTCTCCTTCTTATTATGCTAATAATTGA

>TTHERM_00028580(protein)
MSEDDFLEEDNNSYNYDDEEDGSYGEEVSNAKRKGKTLKQNKKKKQKKNQFFEEDAEESN
GEEEEEVNQEKRLRNQGDANLYRQRKARDMSEVIHDLEQRGDQTPPQMDDLDFDDIDMEH
MPENIRKYGIQQRKDQNIFSVPVRKTKEKEVVICLLNKYAQLNPEQNYGIYSISYVPSVE
SLIYIEGVNKRAVINFLDKYPDCNCNKIELVNIEEFQAIFEDQGKEQESYNAEVGQFVRI
SRKARNSDYINDIGQIHFIKKNNRVVVKLIPRVRIEDMRKKYEQMNKNSKKRNQDSFVQV
EGDAEDDQANKKGKFPYNKFGNQPVVPTRTVDEILKTRPEQQFFSLDEYEKDWSECYKAV
SEEYRPENESTNLFQHCGYVYKTFNCKDLIFNEQLKSLEELKKFYPHLELDEIMNQNGRF
LKMANNQTTFVVGDPVLIDNTLKGKIISLGKETAKVLIKKKKLSIEEEYPLKQLVKYFED
GSRVKVISGTSEGITGTVLSTKGDVCEVFTDNNNTIEVRTKDLAITGEASQDAEKIVVNE
SSDRNLGLKKKDLVKLTGFNNVGLILDISKDYIKILDQNGKIKNVSSFSINTKIDTRKYI
GKNAEGNNITNNSNIIIKQGQYSGYQCQVIHVYKSLVFLFNPKFRDTYTVENINNVSLQT
TNPVIQRQEAKIAYDMKYGKQDNLKPDDMKQYVGRQMRIIGGKYKGFQCTVTDIRNDQIK
VEINSKFITVFIPKCDLIATDKGQTELEYGKTPSYNAQSIYQPNNHENINSPSYYANN

>TTHERM_00028580(gene)
ATGAGTGAGGATGATTTTTTAGAAGAAGATAACAACTCATATAATTATGATGATGAAGAA
GATGGTTCATATGGGGTTATTATTTTTCATTCATTTAATTGTATTTAGTTCTAACTAATC
TGCAAATGATATTTATTAATGATCATAGTTAGCAAAATTCAAATTTTAATTCAAGAAAGA
AAAATTTAGTTCATCTACTTTGTCAAATGGTTCTGATTATTGAAGTTGATTTTTTAAAAA
ATAGGAAGAAGTTTCTAATGCTAAAAGAAAGGGCAAAACTCTGAAATAGAATAAGAAAAA
AAAATAGAAAAAAAATTAATTCTTCGAAGAAGATGCCGAAGAAAGTAACGGAGAAGAGGA
AGAAGAAGTCAACCAGGAAAAGAGATTAAGAAATTGTACTCAAAATTATTTAATTCTTTT
AATTTATATTAGTTTTTAGGGAAAAATAATAATAAAATAATCTAGCTAGCTAGCTTTATA
TAATAAGTCTAAGTTATGTGGGTTTTATGAATTATAAAGATAATCAAAAATTTTGAATAA
GCAGCTTCAAAAATATTGTCATAGATTATTTAATATATATAATCAAGACAAAATAAATTA
AAAAGAATTTATAAAGAGAAAATTAGAATAATTTATTTATTCATTTTCTTTTTTAGAATT
TTGTTTGAGCATAATTTTCATTATTTGTTTTCTTTAATATGAAAAGAAGGAGATGCTAAT
TTGTATAGGTAGCGTAAAGCAAGAGATATGAGTGAAGTCATTCATGACCTCGAGCAGAGA
GGTGATTAAACTCCACCCCAAATGGATGATTTGGACTTTGATGATATAGATATGGAGCAC
ATGCCTGAAAATATCAGAAAATATGGTATCTAATAGAGAAAAGATTAAAATATTTTCAGT
GTTCCAGTCAGAAAAACCAAAGAAAAAGAAGTTGTTATTTGTCTACTAAATAAATATGCT
CAACTAAATCCTGAGCAAAATTATGGAATTTATTCTATTTCATATGTTCCTTCAGTTGAA
TCTCTAATTTATATTGAAGGTGTTAACAAAAGAGCAGTCATAAATTTCTTGGATGTAATA
TATTTATTCGAACAAATAATTAATTAATTTTACAATTGGTTTATGCAATATCATCTATTA
ATTTATCTAGAAATATCCTGACTGTAACTGCAACAAAATTGAATTAGTCAACATTGAGGA
GTTTTAAGCCATATTCGAAGACTAGGGCAAAGAGCAAGAATCATATAACGCAGAAGTTGG
CTAGTTTGTTAGAATTAGTCGTAAAGCAAGAAACTCTGACTACATCAACGATATAGGTTA
GATCCACTTTATCAAAAAGAATAATAGGGTTGTCGTCAAATTGATTCCTAGAGTTAGAAT
TGAGGATATGAGAAAGAAATATGAACAAATGAATAAAAATAGTAAAAAGAGAAATCAAGA
TAGCTTTGTTTAAGTTGAAGGTGATGCTGAGGACGATTAGGCAAACAAGAAGGGTAAATT
CCCTTACAACAAATTTGGAAATCAGCCTGTAGTTCCAACAAGAACAGTTGATGAAATTCT
AAAGACCAGACCAGAATAGCAATTCTTTTCTTTAGATGAATATGAAAAAGATTGGTCAGA
ATGCTATAAAGCTGTTAGTGAAGAATATAGACCAGGTAAAAAAATTAGCAAACAGAAACA
AAAATTTAAAAAATCTATGAAATTTTTTCTAAAAATTATTTTTTTTAATTTAGAAAATGA
GTCAACAAATCTTTTCTAACATTGTGGTTATGTTTATAAAACATTCAATTGCAAAGACCT
TATCTTCAATGAATAGCTCAAGAGTCTTGAAGAACTCAAAAAGTTTTATCCTCACTTAGA
ACTAGACGAAATTATGAATCAGAACGGCAGATTTTTAAAAATGGCCAACAATCAAACTAC
TTTCGTTGTTGGAGACCCTGTTTTAATTGACAACACTCTTAAGGGAAAAATCATTTCCCT
TGGAAAAGAAACAGCTAAAGTTTTAATTAAAAAGAAAAAGCTATCCATAGAAGAAGAGTA
TCCATTGAAATAGCTCGTTAAGTATTTTGAAGATGGATCAAGAGTCAAAGTAATCTCAGG
TACAAGCGAAGGAATAGTATAAAAATTAACTTTAAAAACTAATGATTAATACTAATTTTT
ATTAATAAAATCATAAAGACTGGTACGGTTTTAAGCACAAAAGGTGATGTGTGTGAAGTT
TTTACAGATAATAATAATACTATTGAAGTTAGAACAAAAGATCTAGCTATAACAGGTGAA
GCAAGTTAAGATGCAGAAAAAATTGTAGTTAATGAAAGTAGTGATAGAAATCTTGGCCTT
AAGAAAAAAGATTTAGTGAAACTTACTGGTTTCAATAATGTAGGACTTATCCTTGACATC
TCTAAAGATTATATTAAGATTCTAGATCAAAATGGCAAAATCAAAAACGTCAGCTCTTTT
TCCATAAACACAAAAATAGACACAAGAAAATATATTGGTAAAAACGCAGAGGGAAATAAC
ATCACTAATAACTCCAATATTATTATCAAGCAAGGATAATACTCAGTAAACGAACTATTA
AATCTTAAATTTATGTCACAAATTTATTTTAATACAAATAGGGATATCAATGTTAAGTCA
TTCATGTCTACAAGTCATTAGTTTTCTTATTTAATCCAAAATTCAGAGACAGTAAAATTA
AATTTCAAAAAATTCAATAAAATTAAAATCAATAAACAACATAAAATTAGCATACACTGT
AGAAAACATAAACAACGTCTCTCTACAAACAACTAATCCAGTTATTTAGAGATAAGAAGC
TAAAATTGCCTACGATATGAAATATGGTAAGTAAGACAACTTAAAACCAGATGATATGAA
GTAGTATGTTGGTAGACAGATGAGAATTATAGGAGGTAAATATAAGGGATTTTAATGCAC
TGTTACTGATATTAGAAATGACTAAATTAAGGTTGAGATTAACTCAAAGTTTATTACTGT
CTTCATTCCTAAGTGCGATCTTATAGCTACTGATAAAGGCTAAACAGAATTAGAGTATGG
TAAGACTCCAAGCTATAACGCTCAAAGCATCTATTAGCCAAACAATCATGAAAACATAAA
CTCTCCTTCTTATTATGCTAATAATTGA