Identifiers and Description

Gene Model Identifier

TTHERM_00449090

Standard Name

SNF8 (Sucrose NonFermenting )

Aliases

PreTt15427 | 52.m00205 | 3811.m00962

Description

EAP30/Vps36 family protein; Component of the ESCRT-II complex

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

No Data fetched for Domains

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.3%

TetraMine Data

TTHERM_00449090

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_14986.1	4.999555668078159e-151	hypothetical protein (246 aa)
WormBase	WBGene00016167	7.996210139153865e-29	locus:vps-22 status:Confirme d UniProt:Q18258 protein_i d:CCD65742.1
DictyBase	DDB_G0283203	2.9993110246221282e-28	vps22 on chromosome: 4 positio n 415279 to 416235
SGD	YPL002C	7.000924640675686e-24	SNF8 Component of the ESCRT-II complex, which is involved in ubiquitin-dependent sorting o f proteins into the endosome; appears to be functionally rel ated to SNF7; involved in gluc ose derepression
Oxytricha	Contig10454.0.g12	6.996829646809514e-23	EAP30/Vps36 family

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00449090(coding)
ATGTATGGCGGTAAATAAGCAATGATGAAGTAGCTAGAATAGCAATAAGCTAGATAGCAG
ATGGGATAGTAGTTAATGCAGCAGAAAATTACAAGAATGAAGGACATTTATAATGTTTTT
TAAGAAAATATGCAAAAATACGCTGCATAATATGCTAATGAAATCAATAAAGATCCAAAC
TTTAGAGACAACTTTAATTAGCTCTGCTAAAATTTAGGCATAGATCCTATGATATCATAA
AAAACCTTATTTTCAAACCTTGGATTTGGAGATTTCTACAACGAATTAGCAATGAAGATT
TTGGATATTACAGCCCGTAAAAGAAATGAGAATGGTGGAATGATGAAATTGATTGACATC
ATTAATGAATTCGAAAAAAGATATAAAACAAAGATATCCAAGAAAGACATTTAAGAAGCC
TTAAAAACAATAACTTGTCTTGGTGGTTGTCAGTTAGTTAACAATGAGTATGTAAGCACT
TCTAACTTATCTATGTCAGGGGACTTTAATAGTGTAATTGAAATTGCTGAAAAGTATGGT
CATGTCAGTGAGTAGCTTATGAAAGAATAAAAAGGATGGAATAAAGACAAATTTAAATTA
GTAATAGATTAGCTGAGAGGAGAAGGCATGGTTTGGGTAGATAAAAAAACTCAGTCTGGT
CTACCTAATTATTATTTCCCCTCCATGCTTAATAGCTTTGTTGATAATTTATAAGAATTC
AGTAAATATATTAAATGA

>TTHERM_00449090(protein)
MYGGKQAMMKQLEQQQARQQMGQQLMQQKITRMKDIYNVFQENMQKYAAQYANEINKDPN
FRDNFNQLCQNLGIDPMISQKTLFSNLGFGDFYNELAMKILDITARKRNENGGMMKLIDI
INEFEKRYKTKISKKDIQEALKTITCLGGCQLVNNEYVSTSNLSMSGDFNSVIEIAEKYG
HVSEQLMKEQKGWNKDKFKLVIDQLRGEGMVWVDKKTQSGLPNYYFPSMLNSFVDNLQEF
SKYIK

>TTHERM_00449090(gene)
ATGTATGGCGGTAAATAAGCAATGATGAAGTAGCTAGAATAGCAAGTAATGAGCATAAAA
TATTTTTGTTTCTTTAGAACATTACTTTTAAATTTAGGTTTGACAATTATAATATAATTT
GTTTCTAATAGTAAGCTAGATAGCAGATGGGATAGTAGTTAATGCAGCAGAAAATTACAA
GAGTAAAAAATATTTATGATTAGTCTTGCAGTCATTAAATAAACTAACTTATTTTATGGA
TTATTAATTTAGATGAAGGACATTTATAATGTTTTTTAAGAAAATATGCAAAAATACGCT
GCATAATATGCTAATGAAATCAATAAAGATCCAAACTTTAGAGACAACTTTAATTAGCTC
TGCTAAAATTTAGGCATAGATCCTATGATATGTAGCTTAATATTATTTTCTTAAACTGTT
TTTAGCATTATATTCTTACTTTAACAAACAAATAGCATAAAAAACCTTATTTTCAAACCT
TGGATTTGGAGATTTCTACAACGAATTAGCAGTAAATTTGATATTGAAAAGTAATAGATA
AGCAACAAGTATTATAATTAAATTAATAAAATAGATGAAGATTTTGGATATTACAGCCCG
TAAAAGAAATGAGAATGGTGGAATGATGAAATTGATTGACATCATTAATGAATTCGAAAA
AAGATATAAAACAAAGATATCCAAGTAAATATAGAAAGCAATCAATCAATATATTTTAAT
AAACTGCAAAATACTATTTTTAGTAATTTAAAAAAATTAATCCTTTTTTATTTTAAAGGA
AAGACATTTAAGAAGCCTTAAAAACAATAACTTGTCTTGGTGGTTGTCAGTTAGTTAACA
ATGAGTATGTAAGCACTTCTAACTTATCTATGTCAGGGGACTTTAATAGTGTAATTGAAA
TTGCTGAAAAGGTAATCAATATTTTTATTTGTTAAAATGATTTAATCAATAATTCATTTT
ATTCCATAGTATGGTCATGTCAGTGAGTAGCTTATGAAAGAATAAAAAGGATGGAATAAA
GACAAATTTAAATTAGTAATAGATTAGCTGAGAGGAGAAGGCATGGTTTGGGTAGATAAA
AAAACTCAGTCTGGTCTACCTAATTATTATTTCCCCTCCATGCTTAATAGCTTTGTTGAT
AATTTATAAGAATTCAGTAAATATATTAAATGA