Identifiers and Description
Gene Model Identifier
TTHERM_00426320Standard Name
SKP1 (Skp1 homolog)Aliases
PreTt14067 | 47.m00262 | p20Description
SKP1 SCF ubiquitin ligase complex protein; Skp1 homolog; gene depletion induced telomere elongation; affinity purification enriched for SCF ubiquitin ligase componentsGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- SCF ubiquitin ligase complex (ISS) | GO:0019005 | Ref:17220281
Biological Process
- negative regulation of telomere maintenance (IDA) | GO:0032205 | Ref:17220281
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.4%
TetraMine Data
TTHERM_00426320
WebApollo
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Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_00167.1 2.9985100291019436e-113 suppressor-kinetochore protein
1 (167 aa)
Oxytricha Contig20929.0.g68 2.000597631390999e-64 Skp1 family, dimerisation doma
in
DictyBase DDB_G0269230 9.000941515806455e-45 fpaA on chromosome: 1 position
3989908 to 3990396
WormBase WBGene00004807 2.00017271388466e-38 locus:skr-1 status:Confirmed
UniProt:G5ECU1 protein_id
:CAB03110.1
SGD YDR328C 7.002264059090237e-38 SKP1 Evolutionarily conserved
kinetochore protein that is pa
rt of multiple protein complex
es, including the SCF ubiquiti
n ligase complex, the CBF3 com
plex that binds centromeric DN
A, and the RAVE complex that r
egulates assembly of the V-ATP
ase
Stentor Coeruleus SteCoe_6441 3.975449735908647e-31
General Information
No Data fetched for General Information
Associated Literature
- Ref:17220281: Witkin KL, Prathapam R, Collins K (2007) Positive and negative regulation of Tetrahymena telomerase holoenzyme. Molecular and cellular biology 27(6):2074-83
Sequences
>TTHERM_00426320(coding)
ATGGATAAAGGTTCTACAAAGGTCAAATTATTGTCTCTTGAAAACGAAATTATTGAAGTT
GACGAAGAAGTCGCTAAGAAGTCATAGTTAATTAAAAATATGATTGAAGATACTGGAACT
GAAGATGATATTCCAATTCCAAATGTTAAGAAGGAGATTCTTTTAAAAATTTTAGAGTAC
TGCGAAAAGCACAAAAACGATAACCCACCTGAAATCGAAAAGCCATTAACCACCAGCAAT
TTAAGTGAATTAGTAGATCCATATGATGCTAAATTTATTGATATTGAAAATCTCGAATAA
CTCTTTGAAATTATATTAGCTGCTAACTATCTCGATATAAAATCTCTTCTTGACTTAGCT
TGCGCCAAAGTTGCTACTCTTATCAAGAACAAAACTCCTGATGAAATCAGAAAAACTTTC
AACATTCCTAACGACTTTACCCCTGAAGAAGAAGCTCAAATTAGAGAAGAAAATAAATGG
GCTGAAGAAGCCACTTCTTGA>TTHERM_00426320(protein)
MDKGSTKVKLLSLENEIIEVDEEVAKKSQLIKNMIEDTGTEDDIPIPNVKKEILLKILEY
CEKHKNDNPPEIEKPLTTSNLSELVDPYDAKFIDIENLEQLFEIILAANYLDIKSLLDLA
CAKVATLIKNKTPDEIRKTFNIPNDFTPEEEAQIREENKWAEEATS>TTHERM_00426320(gene)
ATGGATAAAGGTTCTACAAAGGTCAAATTATTGTCTCTTGAAAACGAAATTATTGAAGTA
ATTAATTAGTTTATTGATTGTTCATTCTTTGCTCATAATGAAGCAAGAGCTTTTTGAGAA
TTATTGTTATCATCATTCTGATGAATGATTAATTATTCATTCATTTAATATTTTTAATTA
ATTATAGGTTGACGAAGAAGTCGCTAAGAAGTCATAGTTAATTAAAAATATGATTGAAGG
TAAATTTATTTTATAGCAATAAATAAACAAAAGCAGCATAATAATAAAATATTTTGGTAA
TTTAAAGATACTGGAACTGAAGATGATATTCCAATTCCAAATGTTAAGAAGGAGATTCTT
TTAAAAATTTTAGAGTACTGCGAAAAGCACAAAAACGATAACCCACCTGAAATCGAAAAG
CCATTAACCACCAGCAATTTAAGTGAATTAGTAGATCCATATGATGCTAAATTTATTGAT
ATTGAAAATCTCGAATAACTCTTTGAAATTATATTAGCTGCTAACTATCTCGATATAAAA
TCTCTTCTTGACTTAGCTTGCGCCAAAGTTGCTACTCTTATCAAGAGTAAGATCAGAAAA
TTAAATAGCTTTTTTGTTTGTTTTCTATGCATGCATTTTATTCTATATTAATTTAACTTC
GCAAGAAAAACGACTATTTCATTAATGTTTTTTTGCAAAAATCTAACCAAAATGCATTAT
AAAAAGAGCTACTAAATGCATATTAGTTGACTTTTTCATTAATATATTTACTTATTTTAA
CTTATAATAGACAAAACTCCTGATGAAATCAGAAAAACTTTCAACATTCCTAACGACTTT
ACCCCTGAAGAAGAAGCTCAAATTAGAGAAGAAAATAAATGGGCTGAAGAAGCCACTTCT
TGA