Identifiers and Description
Gene Model Identifier
TTHERM_00497540Standard Name
SHQ1 (Small nucleolar RNAs of the box H/ACA family Quantitative accumulation)Aliases
PreTt06919 | 62.m00203 | 3715.m00064Description
Homolog of S. cerevisiae SHQ1 chaperone protein required for the assembly of box H/ACA snoRNPsGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
No Data fetched for Gene Ontology Annotations
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 11.3%
TetraMine Data
TTHERM_00497540
WebApollo
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Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_12727.1 9.997093137033517e-262 hypothetical protein (432 aa)
Oxytricha Contig19252.0.g51 3.0009061039838537e-46 SHQ1 protein
WormBase WBGene00021655 7.996378988338516e-41 Protein SHQ1 homolog status:
Confirmed UniProt:Q9TYM6 p
rotein_id:CCD71630.1
DictyBase DDB_G0269304 2.0008113830639685e-30 DDB_G0269304 on chromosome: 1
position 2484101 to 2485936
SGD YIL104C 7.996210139153865e-29 SHQ1 Chaperone protein require
d for the assembly of box H/AC
A snoRNPs and thus for pre-rRN
A processing, forms a complex
with Naf1p and interacts with
H/ACA snoRNP components Nhp2p
and Cbf5p; homology with known
Hsp90p cochaperones
Stentor Coeruleus SteCoe_16006 5.74952226429356e-19
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00497540(coding)
ATGATCATCCCCTAATTTAAGCTTACTCAGGATAGTAAATACGTAGTAGCAGTTATTCGT
ATTCCTTATGTTAAAATAAGTAATGCAGAATTCTATATTGAAGGAAGGAACTTTAAATTC
TTTTTGCATCCTTACCTTTTATCAATAGAATTTAAAAATGATTTATTTAAGTCTGATGAA
CCAGCTGCTGCTTCATACAATCATGATACCTATGAGTTAACAGTTAAAATTTAGAAGGCT
ACTGAAGGTGAGCATTTTGAAGATTTAGATATGATAACTTAATTGCTTGCAGCTAGTAGA
AAAAAAGAAGTGAAAAAACCTGAATAGAAAAAAAATAAAAAACCATTAATCGAAGTAATA
GGAGAGGCAGATCATACTGAATAGACTAATAACGATGAAATTGAAGAGATCAAATAGCAA
GTTGAGAACTTGGTTTTGTCCTAAGACGCATATGCTTATGGATTTAATTAATAAACTAAA
GGTTATTTCTAAGATCTTGGTGAAGAAATATTTGAAATTGGTCACTTTAACCCAGACGAA
ATACCTATAAGTGATAGAATTAATTTAAGAAATGAATATGTAAATAGCAAGTTTGATGAA
GATGCTTATATCTATGATACATTTGAAAATGAGGAGATAGACTCATATATTAAATTAAAT
TTAGAATTTTTATCAAAAGTAGCTTCAATTAATTAAGATACAAGCTCTTCTTACACTCCC
GAAGAATGGAACTAGTTAAAAAAATTGCCAAATAAAGAATTCATAATAAATAATAAAAAT
AAATGTTTGATGGAAATTATTGATATCTTGTTTGCATTTGCATACGAATTAAGATGTATG
GGAGGAGAATTTTCTTGTGAAAGTGCTGCAACTATAAACTATTTATCAAGTGTTTTGAGC
TGTTTCATCTGCGATAATACCCTGAACGAAATAATCAGATAGTGCTACAGAAGGGCTTTA
ACTTTCCCTATGTTAAGAAATTTTAAATTAATTTAATAGGCATAACAGGATTTAGTAATA
ATACTTTAAAGTGGTAGAGCTGGAGTTCTTAAAACTTTACTTTAAATTAAATACTTGTTT
GAAGTTAACGAACCTAGATACCATTTAAATAATTTATACATTGAAGATTTTTGTATATGG
GTTTAAACACTCAAAGATGAAGATTTTTAAAATCTTGCAGGGCAAATTTAACAGATAGAA
ATTAATAAAAAAGATCTGGATCTCAATTTAGTAGAAATAGATTAAGACTGTGAATAAATG
CTTCTTGAATAATAAGAAAGTGATAAGCATGATTGA>TTHERM_00497540(protein)
MIIPQFKLTQDSKYVVAVIRIPYVKISNAEFYIEGRNFKFFLHPYLLSIEFKNDLFKSDE
PAAASYNHDTYELTVKIQKATEGEHFEDLDMITQLLAASRKKEVKKPEQKKNKKPLIEVI
GEADHTEQTNNDEIEEIKQQVENLVLSQDAYAYGFNQQTKGYFQDLGEEIFEIGHFNPDE
IPISDRINLRNEYVNSKFDEDAYIYDTFENEEIDSYIKLNLEFLSKVASINQDTSSSYTP
EEWNQLKKLPNKEFIINNKNKCLMEIIDILFAFAYELRCMGGEFSCESAATINYLSSVLS
CFICDNTLNEIIRQCYRRALTFPMLRNFKLIQQAQQDLVIILQSGRAGVLKTLLQIKYLF
EVNEPRYHLNNLYIEDFCIWVQTLKDEDFQNLAGQIQQIEINKKDLDLNLVEIDQDCEQM
LLEQQESDKHD>TTHERM_00497540(gene)
ATGATCATCCCCTAATTTAAGCTTACTCAGGATAGTAAATACGTAGTAGCAGTTATTCGT
ATTCCTTATGTTAAAATAAGTAATGCAGAATTCTATATTGAAGGAAGGAACTTTAAATTC
TTTTTGCATCCTTACCTTTTATCAATAGAATTTAAAAATGATTTATTTAAGTCTGATGAA
CCAGCTGCTGCTTCATACAATCATGATACCTATGAGTTAACAGTTAAAATTTAGAAGGCT
ACTGAAGGTGAGCATTTTGAAGATTTAGATATGATAACTTAATTGCTTGCAGCTAGTAGA
AAAAAAGAAGTGAAAAAACCTGAATAGAAAAAAAATAAAAAACCATTAATCGAAGTAATA
GGAGAGGCAGATCATACTGAATAGACTAATAACGATGAAATTGAAGAGATCAAATAGCAA
GTTGAGAACTTGGTTTTGTCCTAAGACGCATATGCTTATGGATTTAATTAATAAACTAAA
GGTTATTTCTAAGATCTTGGTGAAGAAATATTTGAAATTGGTCACTTTAACCCAGACGAA
ATACCTATAAGTGATAGAATTAATTTAAGAAATGAATATGTAAATAGCAAGTTTGATGAA
GATGCTTATATCTATGATACATTTGAAAATGAGGAGATAGACTCATATATTAAATTAAAT
TTAGAATTTTTATCAAAAGTAGCTTCAATTAATTAAGATACAAGCTCTTCTTACACTCCC
GAAGAATGGAACTAGTTAAAAAAATTGCCAAATAAAGAATTCATAATAAATGTAAATAAA
ATTACTTATTTTAAATTTAAAAAAAAGATAAATATTCAAAAATAATTTTTAATTTTTTAA
ACAAACTAGAATAAAAATAAATGTTTGATGGAAATTATTGATATCTTGTTTGCATTTGCA
TACGAATTAAGATGTATGGGAGGAGAATTTTCTTGTGAAAGTGCTGCAACTATAAACTAT
TTATCAAGTGTTTTGAGCTGTTTCATCTGCGATAATACCCTGAACGAAATAATCAGATAG
TGCTACAGAAGGGCTTTAACTTTCCCTATGTTAAGAAATTTTAAATTAATTTAATAGGCA
TAACAGGATTTAGTAATAATACTTTAAAGTGGTAGAGCTGGAGTTCTTAAAACTTTACTT
TAAATTAAATACTTGTTTGAAGTTAACGAACCTAGATACCATTTAAATAATTTATACATT
GAAGATTTTTGTATATGGGTTTAAACACTCAAAGATGAAGATTTTTAAAATCTTGCAGGG
CAAATTTAACAGATAGAAATTAATAAAAAAGATCTGGATCTCAATTTAGTAGAAATAGAT
TAAGACTGTGAATAAATGCTTCTTGAATAATAAGAAAGTGATAAGCATGATTGA