Identifiers and Description

Gene Model Identifier

TTHERM_00637690

Standard Name

SAF4 (SWI/SNF-associated factor 4)

Aliases

PreTt19772 | 91.m00187

Description

Member of the SWI/SNF complex. Contains 31% glutamine

Genome Browser (Macronucleus)

GBrowse

Genome Browser (Micronucleus)

GBrowse

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

No Data fetched for Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.1%

TetraMine Data

TTHERM_00637690

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_03588.11.9990871925214856e-61hypothetical protein (404 aa)

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:29523178: Saettone A, Garg J, Lambert JP, Nabeel-Shah S, Ponce M, Burtch A, Thuppu Mudalige C, Gingras AC, Pearlman RE, Fillingham J (2018) The bromodomain-containing protein Ibd1 links multiple chromatin-related protein complexes to highly expressed genes in Tetrahymena thermophila. Epigenetics & chromatin 11(1):10

Sequences

>TTHERM_00637690(coding)
ATGATTGAACATCCCCAATAGATTTAATAATAATAATAATAGGTATAAAATCCATAACAA
TAGTAGTAGCCATAACTACCATATAATCCAAGCACAACACAGCAATAATAAGCAACTTAA
CCTTAGCATAATTATTAGTATTAGCAAGGATAGCCAACTCCAATTTAACAAACTCCGGCA
CCAATAAGCAATATTTAAACTAGTTCATAACAAAATCCCTAAATAGTTTAAGAAGAACCT
ATTAAACCTTAAAGAATGCCTAAATTATCTCATGAAGAGTTAATGCAAGAAGCAAAGAAA
ATCGTTAAACTGCATCCTCCTAAGCATTAGAAAACAAAAGATGAAATAAATAGGATATTG
GTTGATAACTATGAAATTTTATTAGAATTGAAGAAGGAATATATCAAAAGAAAGAACTAA
AACATTACAAATTCAGATATCCTAAATATCATTTATGATTATGAAAAAAATCTTGTTAAG
CTATGCAGAACTCTTCCACCTGATTAGATAATTGATATTGATATCTTGAAGAATGGAAAA
ACTAAGTTATTAGATAACTCTAAGATAAAGAAGCCTAAGATTTAGCAAATATTTGCCTAA
TAATAATAGTAAAAATCATAGTAGCAAATATAATAAGCACCTATGAATGGTGTACCACGC
CCTCATGATCAATAACATTAAATTCAATAATAACATCACTAAAATTAACCTCCTGTACCA
AACCCATAAGCTAACTAATATTAATAGTAACAACAGCAATAGCCTTAGTAGTAAATCAAT
TAATAGAACTAGCTACACCAATAGCCACATTCAAATAATTAACCAAACTAAACTCTTAAG
TAACCAATTTAACAACATAGCTAACTTTAGTAGCCTATGCACAACTAAATGCCTTAGCAA
GCTCCTTAAATTCCATAGTAAAACTAACCTCCTCATCATGCTTAGGGACAATAATTACCT
CCTCCTGCTCATCCATAATAGAACTAATAGTAATAATAGACATAATATCAGTAACAAGCT
CCTTAACATTTATAATAGCAACAATAGCATTAATAAAATTATTCTAATAATTACTGA


>TTHERM_00637690(protein)
MIEHPQQIQQQQQQVQNPQQQQQPQLPYNPSTTQQQQATQPQHNYQYQQGQPTPIQQTPA
PISNIQTSSQQNPQIVQEEPIKPQRMPKLSHEELMQEAKKIVKLHPPKHQKTKDEINRIL
VDNYEILLELKKEYIKRKNQNITNSDILNIIYDYEKNLVKLCRTLPPDQIIDIDILKNGK
TKLLDNSKIKKPKIQQIFAQQQQQKSQQQIQQAPMNGVPRPHDQQHQIQQQHHQNQPPVP
NPQANQYQQQQQQQPQQQINQQNQLHQQPHSNNQPNQTLKQPIQQHSQLQQPMHNQMPQQ
APQIPQQNQPPHHAQGQQLPPPAHPQQNQQQQQTQYQQQAPQHLQQQQQHQQNYSNNY


>TTHERM_00637690(gene)
TATCAGCTTTATTTATGTGTGTTAGATGCTTACCTCATATATAAATTTGTTTTATTTAAT
AAAAGCGGGAGAAGTTGCTTATTATTTAATAACAAAAAATTACTTTAAAAATTAATTAAT
TTAATATTGATACATATTGCTCTTACATCATAAATGATTGAACATCCCCAATAGATTTAA
TAATAATAATAATAGGTATAAAATCCATAACAATAGTAGTAGCCATAACTACCATATAAT
CCAAGCACAACACAGCAATAATAAGCAACTTAACCTTAGCATAATTATTAGTATTAGCAA
GGATAGCCAACTCCAATTTAACAAACTCCGGCACCAATAAGCAATATTTAAACTAGTTCA
TAACAAAATCCCTAAATAGTTTAAGAAGAACCTATTAAACCTTAAAGAATGCCTAAATTA
TCTCATGAAGAGTTAATGCAAGAAGCAAAGAAAATCGTTAAACTGCATCCTCCTAAGCAT
TAGAAAACAAAAGATGAAGTATTATATGAAAATGCTAGATGGATAAAAAAATATTTTTAT
AATTAAAAAATAGATAAATAGGATATTGGTTGATAACTATGAAATTTTATTAGAATTGAA
GAAGGAATATATCAAAAGAAAGAACTAAAACATTACAAATTCAGATATCCTAAATATCAG
TAAGCAGATAGAAAATATATTTTTAGCAAATTATTTATTTAATGATCATAAATTTTCAAA
TTTTGGATATATTAATTTATAAATTTTCTATGCTAAGTTGAGATATTTATTTATTAGTCA
ACTGAGTTTAAATAGTGTTTTTTAATATTTCTTTATTCATTTATTGATATTGATATATTC
TCTTTTATTCTCATATATCATGTTTTTAATATTTAAAGTAACTAACTTATTTCTTAAAAA
AATTAAATAGTTTATGATTATGAAAAAAATCTTGTTAAGCTATGCAGAACTCTTCCACCT
GATTAGATAATTGATATTGATATCTTGAAGAATGGAAAAACTAAGTTATTAGATAACTCT
AAGATAAAGAAGCCTAAGATTTAGCAAATATTTGCCTAATAATAATAGTAAAAATCATAG
TAGCAAATATAATAAGCACCTATGAATGGTGTACCACGCCCTCATGATCAATAACATTAA
ATTCAATAATAACATCACTAAAATTAACCTCCTGTACCAAACCCATAAGCTAACTAATAT
TAATAGTAACAACAGCAATAGCCTTAGTAGTAAATCAATTAATAGAACTAGCTACACCAA
TAGCCACATTCAAATAATTAACCAAACTAAACTCTTAAGTAACCAATTTAACAACATAGC
TAACTTTAGTAGCCTATGCACAACTAAATGCCTTAGCAAGCTCCTTAAATTCCATAGTAA
AACTAACCTCCTCATCATGCTTAGGGACAATAATTACCTCCTCCTGCTCATCCATAATAG
AACTAATAGTAATAATAGACATAATATCAGTAACAAGCTCCTTAACATTTATAATAGCAA
CAATAGCATTAATAAAATTATTCTAATAATTACTGA