Identifiers and Description

Gene Model Identifier

TTHERM_00129650

Standard Name

SAF3 (SWI/SNF-associated factor 3)

Aliases

PreTt09516 | 9.m00537 | 3699.m00245

Description

Member of the SWI/SNF complex. Contains 26% glutamine.

Genome Browser (Macronucleus)

GBrowse

Genome Browser (Micronucleus)

GBrowse

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 11%

TetraMine Data

TTHERM_00129650

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_19147.19.997093137033517e-262hypothetical protein (1159 aa)

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:29523178: Saettone A, Garg J, Lambert JP, Nabeel-Shah S, Ponce M, Burtch A, Thuppu Mudalige C, Gingras AC, Pearlman RE, Fillingham J (2018) The bromodomain-containing protein Ibd1 links multiple chromatin-related protein complexes to highly expressed genes in Tetrahymena thermophila. Epigenetics & chromatin 11(1):10

Sequences

>TTHERM_00129650(coding)
ATGAAGCAACCTCCATAAGGACCTCCTCCTCAACCTATAAATCCATAATATAATCTGAAA
CCTTAATAATAAGGATAAATGCTATCTAACTCGTAGTAGCTCCAGTAGCAAAGCTAAGCA
TAGCAACCCCCTTAAAATATCTAATAGTAAACACCTCCTCTAGGTCCAAACCCTCAACAG
CCATAAGCCCCTCCAAACTAATAGTATATACCGAGGTAAGCTTCTTAGCCATCTCATTAG
ATCCCTTCATAGCCTACTTCGAACACTAGCATATAAGGTCCCCCTTATCCTTCCAACTAA
CGTCCATAAGCATAAGGTTATTATCAAAATTAGTAGTAACCCTAATAACTACCAGCAGGG
TAAGCAAATACAACAGCCCCTCCTCCAATCACTCCTCATGGAAGCGGATAATATCCTAAT
CCTCCTCATAGTGGAGGATAATTTAATTAAAATCAATAAGGACACTACCCAAATTAACCT
ATAAATTAAACTCCATAGACTAATTAACCTCCTTAACAAAACGGATAAAACCCTCAAGCA
CCATTCAATCCACAAAACAATAATTATGGCTAGAAACCCCCTTACCCTTAAAATTTACCT
CCTCAACAACCTGGTCAAAAGAATATTCCCTAATAGCCTTAATAGCAATAACCAGGTTAA
CCTCCAATTAATCCATAACTAAATCCAAGCACCCATCACAATATGTAAAACTAACCCTAA
TATTAGGGACCTCCTAACTAAGCAGGATATAATAAACCTATGATGGGATAGAATTAAGGA
GCTCCTTCAAATATTCCCCTCTAATAACCTAAACCTCAAGGCCAATAACCACCTCCACCA
AATCAAATGCCTTACAAAGCTCAAGGCAATTATCCTCCTAACCAAAATCCTCAACAAGGA
GGAGCTTAAATTCCAGGATAATAATAGCATAATCCTCAATTAAAGCCATAGTAGGTACCT
ATTTAAAATATGCCTCCACACAATAATGGAAGATCATCATCTTAATAAAATCCTTAAACA
TAAAACCCTCCTTATAATTAGATGGGACCTTAATAAATTCCTCCTAATGTATAAAATCAA
AATTAGAAAAAACCTTATATGAATCCCCCAATGAATGGACCTTAGTCAAGTGGTTAAATT
GGACATCCAAATCACCCTCCTCCTCTTCACCACCCTCACCATTAATCTTAAAAATAAGAA
ATGGATAAGTACGACAGTTAAATTAAGGCTTCCAATTTATTGTAAGATGATGATAAATGG
TTTAAATTGGACCATGATGAAACATACCTGCTTAAACAGGAAAGTCTGAAGAAATCTTTC
AACAAAATTGTTTAAAAGTTGTAGTAAGAAAGACATTTTTCTGATAAAAGGAAATGCCCC
TTTTCAAATTTAGAAACTACTTTGGATAAAAAGTAAAAACTTGACACTTAAAGTCTTAAA
GATGAGTTGGGAAGTTTAAAGAACTCTTTTTCAATAATAAGCTGTTTTGATATGTTTGAA
GAAAAAAAGAAAAAGAAATAGTAAGAAAGCGTGAGTAAAACCACTTCAGAAATAAAATTA
ACAAATACTAAATAAGTGAAAGAGTTCGATATTTTGAAGCTGATTTACTATGAATTCCAT
TTAGCTAAATAGTAAACATCTTCTACTTCTAATTAGTAAAATAATTAGCAAAACCTTCAA
CAATAGCAACCACCAAGAATTTATTCAAGTGATCATACTAACCAGAATAAACCAAATGCA
ATTAATCAACAGTAAATGCCACCAAACTCACAGAATCCTTAAAATAGGCCAAACATGCCC
CCTTATATTTAGTAATAGCAACTAAATTAACCCTAGTAGTAAACCAACAACCCTCCTATA
CCAAACTAGGGCCATTAAAACTATCAAGGAAGCAATCCTTAGAACCCACACCCTAGACCT
ATGTAATAAATGCCACCAATAAATAATTAAAACCCAAATAGCTAAATCAACCAAGGAGGT
CACCCAAATATGCAATAGTAAAACCCTTAGATGATGGGCATGAAATAAAATCCAAATTAA
GCTCCTTTGGCTCCTCCTCCAAATCCAAACTAACAGTAATAAATTCCATAGCAACAACCT
CTTTAAGCAGGCGGACAACAGCCATAAAATTAATAGAGACCTTAATAATATATAGGATAA
TTGCCTCAAAATAGATAATACAGCGGATAACCAAATAGTGCTGGAGGTATGTAGCCTTAG
TAACAAGGTCCTTTACCAGTAAAATAACCTATGCCTCCTTAATAAGGATAGCATCATCCT
TAACAATAGTAGTAATAGTAGCATATTAACTAAGGCTAAAATCCCAATTATCCTATTAAT
AAGTAAATAAATGCTCCACCTATAGGTTAGTAAGGTGGAATGGGAGGAAATCCAAATTAA
AATATGTAGTAGCATCCTAACTACATCAATCAGCAATAGAATTAACAAAATTCATAAAAG
CCTCTTTAGCAATAATAATAATAACAACAACAACAACAACCACCATCAGGAAATCCTCCA
AATTAATAATACCCTGGAGGTATGAATCAGAGATAAAATCCAAGTAATCAAGCCTAGGTT
AACTAATAATAGCAACCTTAGTAACAGTAACCTAACTACTGA


>TTHERM_00129650(protein)
MKQPPQGPPPQPINPQYNLKPQQQGQMLSNSQQLQQQSQAQQPPQNIQQQTPPLGPNPQQ
PQAPPNQQYIPRQASQPSHQIPSQPTSNTSIQGPPYPSNQRPQAQGYYQNQQQPQQLPAG
QANTTAPPPITPHGSGQYPNPPHSGGQFNQNQQGHYPNQPINQTPQTNQPPQQNGQNPQA
PFNPQNNNYGQKPPYPQNLPPQQPGQKNIPQQPQQQQPGQPPINPQLNPSTHHNMQNQPQ
YQGPPNQAGYNKPMMGQNQGAPSNIPLQQPKPQGQQPPPPNQMPYKAQGNYPPNQNPQQG
GAQIPGQQQHNPQLKPQQVPIQNMPPHNNGRSSSQQNPQTQNPPYNQMGPQQIPPNVQNQ
NQKKPYMNPPMNGPQSSGQIGHPNHPPPLHHPHHQSQKQEMDKYDSQIKASNLLQDDDKW
FKLDHDETYLLKQESLKKSFNKIVQKLQQERHFSDKRKCPFSNLETTLDKKQKLDTQSLK
DELGSLKNSFSIISCFDMFEEKKKKKQQESVSKTTSEIKLTNTKQVKEFDILKLIYYEFH
LAKQQTSSTSNQQNNQQNLQQQQPPRIYSSDHTNQNKPNAINQQQMPPNSQNPQNRPNMP
PYIQQQQLNQPQQQTNNPPIPNQGHQNYQGSNPQNPHPRPMQQMPPINNQNPNSQINQGG
HPNMQQQNPQMMGMKQNPNQAPLAPPPNPNQQQQIPQQQPLQAGGQQPQNQQRPQQYIGQ
LPQNRQYSGQPNSAGGMQPQQQGPLPVKQPMPPQQGQHHPQQQQQQQHINQGQNPNYPIN
KQINAPPIGQQGGMGGNPNQNMQQHPNYINQQQNQQNSQKPLQQQQQQQQQQQPPSGNPP
NQQYPGGMNQRQNPSNQAQVNQQQQPQQQQPNY


>TTHERM_00129650(gene)
ATGAAGCAACCTCCATAAGGACCTCCTCCTCAACCTATAAATCCATAATATAATCTGAAA
CCTTAATAATAAGGATAAATGCTATCTAACTCGTAGTAGCTCCAGTAGCAAAGCTAAGCA
TAGCAACCCCCTTAAAATATCTAATAGTAAACACCTCCTCTAGGTCCAAACCCTCAACAG
CCATAAGCCCCTCCAAACTAATAGTATATACCGAGGTAAGCTTCTTAGCCATCTCATTAG
ATCCCTTCATAGCCTACTTCGAACACTAGCATATAAGGTCCCCCTTATCCTTCCAACTAA
CGTCCATAAGCATAAGGTTATTATCAAAATTAGTAGTAACCCTAATAACTACCAGCAGGG
TAAGCAAATACAACAGCCCCTCCTCCAATCACTCCTCATGGAAGCGGATAATATCCTAAT
CCTCCTCATAGTGGAGGATAATTTAATTAAAATCAATAAGGACACTACCCAAATTAACCT
ATAAATTAAACTCCATAGACTAATTAACCTCCTTAACAAAACGGATAAAACCCTCAAGCA
CCATTCAATCCACAAAACAATAATTATGGCTAGAAACCCCCTTACCCTTAAAATTTACCT
CCTCAACAACCTGGTCAAAAGAATATTCCCTAATAGCCTTAATAGCAATAACCAGGTTAA
CCTCCAATTAATCCATAACTAAATCCAAGCACCCATCACAATATGTAAAACTAACCCTAA
TATTAGGGACCTCCTAACTAAGCAGGATATAATAAACCTATGATGGGATAGAATTAAGGA
GCTCCTTCAAATATTCCCCTCTAATAACCTAAACCTCAAGGCCAATAACCACCTCCACCA
AATCAAATGCCTTACAAAGCTCAAGGCAATTATCCTCCTAACCAAAATCCTCAACAAGGA
GGAGCTTAAATTCCAGGATAATAATAGCATAATCCTCAATTAAAGCCATAGTAGGTACCT
ATTTAAAATATGCCTCCACACAATAATGGAAGATCATCATCTTAATAAAATCCTTAAACA
TAAAACCCTCCTTATAATTAGATGGGACCTTAATAAATTCCTCCTAATGTATAAAATCAA
AATTAGAAAAAACCTTATATGAATCCCCCAATGAATGGACCTTAGTCAAGTGGTTAAATT
GGACATCCAAATCACCCTCCTCCTCTTCACCACCCTCACCATTAATCTTAAAAATAAGAA
ATGGATAAGTACGACAGTTAAATTAAGGCTTCCAATTTATTGTAAGATGATGATAAATGG
TTTAAATTGGACCATGATGAAACATACCTGCTTAAACAGGAAAGTCTGAAGAAATCTTTC
AACAAAATTGTTTAAAAGTTGTAGTAAGAAAGACATTTTTCTGATAAAAGGAAATGCCCC
TTTTCAAATTTAGAAACTACTTTGGATAAAAAGTAAAAACTTGACACTTAAAGTCTTAAA
GATGAGTTGGGAAGTTTAAAGAACTCTTTTTCAATAATAAGCTGTTTTGATATGTTTGAA
GAAAAAAAGAAAAAGAAATAGTAAGAAAGCGTGAGTAAAACCACTTCAGAAATAAAATTA
ACAAATACTAAATAAGTGAAAGAGTTCGATATTTTGAAGCTGATTTACTATGAATTCCAT
TTAGCTAAATAGTAAACATCTTCTACTTCTAATTAGTAAAATAATTAGCAAAACCTTCAA
CAATAGCAACCACCAAGAATTTATTCAAGTGATCATACTAACCAGAATAAACCAAATGCA
ATTAATCAACAGTAAATGCCACCAAACTCACAGAATCCTTAAAATAGGCCAAACATGCCC
CCTTATATTTAGTAATAGCAACTAAATTAACCCTAGTAGTAAACCAACAACCCTCCTATA
CCAAACTAGGGCCATTAAAACTATCAAGGAAGCAATCCTTAGAACCCACACCCTAGACCT
ATGTAATAAATGCCACCAATAAATAATTAAAACCCAAATAGCTAAATCAACCAAGGAGGT
CACCCAAATATGCAATAGTAAAACCCTTAGATGATGGGCATGAAATAAAATCCAAATTAA
GCTCCTTTGGCTCCTCCTCCAAATCCAAACTAACAGTAATAAATTCCATAGCAACAACCT
CTTTAAGCAGGCGGACAACAGCCATAAAATTAATAGAGACCTTAATAATATATAGGATAA
TTGCCTCAAAATAGATAATACAGCGGATAACCAAATAGTGCTGGAGGTATGTAGCCTTAG
TAACAAGGTCCTTTACCAGTAAAATAACCTATGCCTCCTTAATAAGGATAGCATCATCCT
TAACAATAGTAGTAATAGTAGCATATTAACTAAGGCTAAAATCCCAATTATCCTATTAAT
AAGTAAATAAATGCTCCACCTATAGGTTAGTAAGGTGGAATGGGAGGAAATCCAAATTAA
AATATGTAGTAGCATCCTAACTACATCAATCAGCAATAGAATTAACAAAATTCATAAAAG
CCTCTTTAGCAATAATAATAATAACAACAACAACAACAACCACCATCAGGAAATCCTCCA
AATTAATAATACCCTGGAGGTATGAATCAGAGATAAAATCCAAGTAATCAAGCCTAGGTT
AACTAATAATAGCAACCTTAGTAACAGTAACCTAACTACTGA