Identifiers and Description

Gene Model Identifier

TTHERM_00346460

Standard Name

SAF2 (SWI/SNF-associated factor 2)

Aliases

PreTt26227 | 35.m00288 | 3695.m00119

Description

Member of the SWI/SNF complex. Contains 13% glutamine

Genome Browser (Macronucleus)

GBrowse

Genome Browser (Micronucleus)

GBrowse

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

  • ( PF07133 ) Merozoite surface protein (SPAM)
  • ( PF08597 ) Translation initiation factor eIF3 subunit

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.7%

TetraMine Data

TTHERM_00346460

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_14653.14.997959784456982e-159hypothetical protein (577 aa)

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:29523178: Saettone A, Garg J, Lambert JP, Nabeel-Shah S, Ponce M, Burtch A, Thuppu Mudalige C, Gingras AC, Pearlman RE, Fillingham J (2018) The bromodomain-containing protein Ibd1 links multiple chromatin-related protein complexes to highly expressed genes in Tetrahymena thermophila. Epigenetics & chromatin 11(1):10

Sequences

>TTHERM_00346460(coding)
ATGGATAGCAGTGGTAACGAAGAAATAAATATGGATCAAGATAAAAATAATCTTGAAGAC
GAGTATGGGTATGAGGATGATGGATATAATGATGAGGCTGAAGAAGATAATAATGCTAAT
GAAGCTAACTAAGGTTAAGAAGAGGATGGTGAAGATGAAGAAGAGGAAGGTGAAGGCGAA
GAAGAAGAGGATTAAGATGATGAAAATAACTAAGTTTAAGATGAAAACGATTAAAATAAT
GAATATGATTTTGGTTCAGATAATAACGCGGAAAATGATATTATGTCTAACAAAAAATAA
ATCTAATCTTAATATAATAACAACCAGAGAAGTACAAGCTAGACTAATTATAATTAAAAG
TAGTAAAGAATGGATGAAGAAGAGGAGGAGGAAGACGATGAAGATGATAGATAAATTTAG
CAAGACGAAGAAGATGATGAAGACGAAGTTGATGATGACGATGACGATGATGATGATTTT
AATGCAGTTTCTTCAAAGAAAAAATAAGCAAAGAGCAGAGTTTCAACTTCTAGCAAATCA
TAAGTTTAAGTTTAAAAAGAATAAGAAACCGTTTCAAGAACTAGAGGAGGTCGCTAAGGA
AGAAGTTAAGCTTTAAGCAATTAAAGCAATTTAAGTTTAAATGCTGCATCTTCAAAAAAA
AATGAATAAAATCTTTAAAGCTAGTAAAGCATTAGAACAAGTGGGAGATCTTCAACAAGA
AATCAGTCTCAATAAGACGTGAGATTATAACTATAGCAATAGGCGAGTTAATCTAAGACA
AGAGGAGGAAAGCAACCATCATCCTAATAGAGTGCTATTCCATAGAAGAAAGAAGTAAGC
TCTTCAAGAAAAAGAAATGGACCTTAATAGCAACAAGATTATGATGAAGATGATGAAGAT
AAATAGTAAATTGTTATGGAAGAAGAAGAAGATTAAGATCTAGAAATGGAAGAAGATGAT
AATAAATAAGAAGGAGAAGATGATGAAGATTTAGAAGATGACGAAGTAGATGAAGATGAA
GAAGATGATGACGATGAAGGAGAAGAAGATGAAGATGATGGATAAGGTGGTTCAGTTGAA
GGAGGCAAAAAGAAATCAAAGAAAAAAGGTGGATTAGGAGGTGATAAAAGCTAATCATAA
GACCAATAAGATATCAAAAATTAAAATAGCTTAAAATTAGCGAATGAAAAAAAGAAAAAT
GAATTCTGGAAGTATCGTCACAAAAACAAAGAAGAGAAATGGAGAGCTCCTTAGTAAGAA
ATAAGACCACTCAACAATCTTGATGAAGAATCTGTCTTAAGATATTCTATTGAAAGAGCT
GCTAAATTTAATGAAGAAATCCTAAGTTAGCAGTTTAGAGTTTCTGAAATTTTAAAATTC
CATGAAAAAAATAAAATGTAGTAAAAATAAATACCACTAGAACACTAATAATAAAACTAG
GCCTTCCCATAAAATGTTCCTGTTATTGTGATAACAGAAGATGACTATAAATATTTAGTA
AACTATAATTAATTCTACCAAAAATCTACAATAGAAGAATTCATAAATAAAAACGTCTAG
CATGAAAATACAGATTGCTTAGGAGATTTGTCCAAGTTTGGTATTAAAAAGCAGCCTTTA
CCTAAAAAGAAGCCTATAAAAAAGAAACCCTCTAAAAAGAGTACATTTGGTGCTGATTTG
CTACAACAATATGAATAAGATTGA


>TTHERM_00346460(protein)
MDSSGNEEINMDQDKNNLEDEYGYEDDGYNDEAEEDNNANEANQGQEEDGEDEEEEGEGE
EEEDQDDENNQVQDENDQNNEYDFGSDNNAENDIMSNKKQIQSQYNNNQRSTSQTNYNQK
QQRMDEEEEEEDDEDDRQIQQDEEDDEDEVDDDDDDDDDFNAVSSKKKQAKSRVSTSSKS
QVQVQKEQETVSRTRGGRQGRSQALSNQSNLSLNAASSKKNEQNLQSQQSIRTSGRSSTR
NQSQQDVRLQLQQQASQSKTRGGKQPSSQQSAIPQKKEVSSSRKRNGPQQQQDYDEDDED
KQQIVMEEEEDQDLEMEEDDNKQEGEDDEDLEDDEVDEDEEDDDDEGEEDEDDGQGGSVE
GGKKKSKKKGGLGGDKSQSQDQQDIKNQNSLKLANEKKKNEFWKYRHKNKEEKWRAPQQE
IRPLNNLDEESVLRYSIERAAKFNEEILSQQFRVSEILKFHEKNKMQQKQIPLEHQQQNQ
AFPQNVPVIVITEDDYKYLVNYNQFYQKSTIEEFINKNVQHENTDCLGDLSKFGIKKQPL
PKKKPIKKKPSKKSTFGADLLQQYEQD


>TTHERM_00346460(gene)
ATGGATAGCAGTGGTAACGAAGAAATAAATATGGATCAAGATAAAAATAATCTTGAAGAC
GAGTATGGGTATGAGGATGATGGATATAATGATGAGGCTGAAGAAGATAATAATGCTAAT
GAAGCTAACTAAGGTTAAGAAGAGGATGGTGAAGATGAAGAAGAGGAAGGTGAAGGCGAA
GAAGAAGAGGATTAAGATGATGAAAATAACTAAGTTTAAGATGAAAACGATTAAAATAAT
GAATATGATTTTGGTTCAGATAATAACGCGGAAAATGATATTATGTCTAACAAAAAATAA
ATCTAATCTTAATATAATAACAACCAGAGAAGTACAAGCTAGACTAATTATAATTAAAAG
TAGTAAAGAATGGATGAAGAAGAGGAGGAGGAAGACGATGAAGATGATAGATAAATTTAG
CAAGACGAAGAAGATGATGAAGACGAAGTTGATGATGACGATGACGATGATGATGATTTT
AATGCAGTTTCTTCAAAGAAAAAATAAGCAAAGAGCAGAGTTTCAACTTCTAGCAAATCA
TAAGTTTAAGTTTAAAAAGAATAAGAAACCGTTTCAAGAACTAGAGGAGGTCGCTAAGGA
AGAAGTTAAGCTTTAAGCAATTAAAGCAATTTAAGTTTAAATGCTGCATCTTCAAAAAAA
AATGAATAAAATCTTTAAAGCTAGTAAAGCATTAGAACAAGTGGGAGATCTTCAACAAGA
AATCAGTCTCAATAAGACGTGAGATTATAACTATAGCAATAGGCGAGTTAATCTAAGACA
AGAGGAGGAAAGCAACCATCATCCTAATAGAGTGCTATTCCATAGAAGAAAGAAGTAAGC
TCTTCAAGAAAAAGAAATGGACCTTAATAGCAACAAGATTATGATGAAGATGATGAAGAT
AAATAGTAAATTGTTATGGAAGAAGAAGAAGATTAAGATCTAGAAATGGAAGAAGATGAT
AATAAATAAGAAGGAGAAGATGATGAAGATTTAGAAGATGACGAAGTAGATGAAGATGAA
GAAGATGATGACGATGAAGGAGAAGAAGATGAAGATGATGGATAAGGTGGTTCAGTTGAA
GGAGGCAAAAAGAAATCAAAGAAAAAAGGTGGATTAGGAGGTGATAAAAGCTAATCATAA
GACCAATAAGATATCAAAAATTAAAATAGCTTAAAATTAGCGAATGAAAAAAAGAAAAAT
GAATTCTGGAAGTATCGTCACAAAAACAAAGAAGAGAAATGGAGAGCTCCTTAGTAAGAA
ATAAGACCACTCAACAATCTTGATGAAGAATCTGTCTTAAGATATTCTATTGAAAGAGCT
GCTAAATTTAATGAAGAAATCCTAAGTTAGCAGTTTAGAGTTTCTGAAATTTTAAAATTC
CATGAAAAAAATAAAATGTAGTAAAAATAAATACCACTAGAACACTAATAATAAAACTAG
GCCTTCCCATAAAATGTTCCTGTTATTGTGATAACAGAAGATGACTATAAATATTTAGTA
AACTATAATTAATTCTACCAAAAATCTACAATAGAAGAATTCATAAATAAAAACGTCTAG
CATGAAAATACAGATTGCTTAGGAGATTTGTCCAAGTTTGGTATTAAAAAGCAGCCTTTA
CCTAAAAAGAAGCCTATAAAAAAGAAACCCTCTAAAAAGAGTACATTTGGTGCTGATTTG
CTACAACAATATGAATAAGATTGA