Identifiers and Description

Gene Model Identifier

TTHERM_00092790

Standard Name

SAF1 (SWI/SNF-associated factor 1)

Aliases

PreTt16533 | 6.m00607 | 3836.m02191

Description

Member of the SWI/SNF complex.

Genome Browser (Macronucleus)

GBrowse

Genome Browser (Micronucleus)

GBrowse

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

No Data fetched for Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.1%

TetraMine Data

TTHERM_00092790

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_02534.16.996525358388811e-93hypothetical protein (200 aa)

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:29523178: Saettone A, Garg J, Lambert JP, Nabeel-Shah S, Ponce M, Burtch A, Thuppu Mudalige C, Gingras AC, Pearlman RE, Fillingham J (2018) The bromodomain-containing protein Ibd1 links multiple chromatin-related protein complexes to highly expressed genes in Tetrahymena thermophila. Epigenetics & chromatin 11(1):10

Sequences

>TTHERM_00092790(coding)
ATGGAAAATATAGTTTTTAAACAATATATTAATAATTATAAAGAGGGAACGAATAGATAA
AAATTGTTTGCAAATCTAATTATTTATTTATTAATTAATTAATTTTGTAATTATTTAGTA
TCTATCAATTTAATATATTAATTAGTAATAATTTAAAAGCATTAAGTAATGAATCAGTAC
AAAGAATTTTCTAACTAAAACTATATAGAATTAAGATTTTCAAATAAAAATGCGAGAGAG
CTCAGCTAAGATGAGGCTATGATTAGATATAAAAGAAATAACTACATTCTTGGCCGCATA
TTTAGTTATGACATTGACTCTGATGGATATTCGGAGGCTGTAAACTTTGATTCTCATTCA
TTAAAAAATGTTTCAGAAGAATAAGTTGAAACAGTATAAAAAGAATTAGAGGAAGTAAAA
GAAAGACATAGAGAAAGTTTTGAAGAATTCAAAATAAAGCAACAATAATTTAAAAAATAT
TTAGAATAGGCTCACCACTTTAAAGATAATGAAGGAATGGATGATTTTATTTAGGAGTTG
ATGGATAAATAATTATTAAATATAGATCATCCCTTTTTCAAAAAAAATTCACCCTTTTAC
TTGTAAACTGATAATAAATTTGTAAAAGAAGTAACACTTCCTGAACATAAAAGCGCATTT
AGAGAAACTCTCGATGAAACATAGTTTGCAAAATTTGAATGA


>TTHERM_00092790(protein)
MENIVFKQYINNYKEGTNRQKLFANLIIYLLINQFCNYLVSINLIYQLVIIQKHQVMNQY
KEFSNQNYIELRFSNKNARELSQDEAMIRYKRNNYILGRIFSYDIDSDGYSEAVNFDSHS
LKNVSEEQVETVQKELEEVKERHRESFEEFKIKQQQFKKYLEQAHHFKDNEGMDDFIQEL
MDKQLLNIDHPFFKKNSPFYLQTDNKFVKEVTLPEHKSAFRETLDETQFAKFE


>TTHERM_00092790(gene)
ATGGAAAATATAGTTTTTAAACAATATATTAATAATTATAAAGAGGGAACGAATAGATAA
AAATTGTTTGCAAATCTAATTATTTATTTATTAATTAATTAATTTTGTAATTATTTAGTA
TCTATCAATTTAATATATTAATTAGTAATAATTTAAAAGCATTAAGTAATGAATCAGTAC
AAAGAATTTTCTAACTAAAACTATATAGTAAACAAATTAAATAGATAGCATAGCATGATT
TGATTTTAAATTAGCCTTATTATTTTCTTAACAAAATAGGAATTAAGATTTTCAAATAAA
AATGCGAGAGAGCTCAGCTAAGATGAGGCTATGATTAGATATAAAAGAAATGTAAATCAT
AATTGATTAATAATATAGAATGTGCAATATTTATAATAAATAATTAAGAACTACATTCTT
GGCCGCATATTTAGTTATGACATTGACTCTGATGGATATTCGGAGGCTGTAAACTTTGAT
TCTCATTCATTAAAAAATGTTTCAGAAGGTAAAAATAAATAAAAAAATATATTTTAGCTT
ATTGAAAATGTAAACATGTCAAAACATTTAAATAAATAAATAAATTAAAATAGAATAAGT
TGAAACAGTATAAAAAGAATTAGAGGAAGTAAAAGAAAGACATAGAGAAAGTTTTGAAGA
ATTCAAAATAAAGCAACAATAATTTAAAAAATATTTAGAATAGTAAATTGTTTTATTTGA
ATTGAATTGAATTTAAAATATTAGTTTAGAAGTGTTTGTTTTAATTACTTAGATTAAACT
CACTAAAAAATAGGGCTCACCACTTTAAAGATAATGAAGGAATGGATGATTTTATTTAGG
AGTTGATGGATAAATAATTATTAAATATAGATCATCCCTTTTTCAAAAAAAATTCACCCT
TTTACTTGTAAACTGATAATAAATTTGTAAAAGAAGTAACACTTCCTGAACATAAAAGCG
CATTTAGAGAAACTCTCGATGAAACATAGTTTGCAAAATTTGAATGA