Identifiers and Description
Gene Model Identifier
TTHERM_00684490
Standard Name
RTEL1 (homolog of Regulator of Telomere Elongation helicase 1)
Aliases
PreTt18162 | 104.m00094 | 3732.m00008
Description
DNA repair helicase (Rad3); DNA repair helicase (rad3)
Genome Browser (Macronucleus)
Genome Browser (Micronucleus)
Gene Ontology Annotations
Molecular Function
Domains
Gene Expression Profile
Tetrahymena Functional Genomics Database:
Change in Gene Expression
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.1%
TetraMine Data
TTHERM_00684490
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description
Tetrahymena borealis EI9_17337.1 9.997093137033517e-262 DNA repair helicase (rad3) (10
51 aa)
Oxytricha Contig21447.0.g90 6.996820840887259e-117 Helicase C-terminal domain
WormBase WBGene00009124 1.0003180480544985e-86 locus:rtel-1 Regulator of te
lomere elongation helicase 1 h
omolog status:Confirmed Un
iProt:Q93575 protein_id:CAB0
2102.1
DictyBase DDB_G0286621 8.001058982644703e-42 fncJ on chromosome: 4 position
4729555 to 4732791
SGD YER171W 9.99723014177113e-33 RAD3 5 to 3 DNA helicase, invo
lved in nucleotide excision re
pair and transcription; subuni
t of RNA polII initiation fact
or TFIIH and of Nucleotide Exc
ision Repair Factor 3 (NEF3);
homolog of human XPD protein;
mutant has aneuploidy toleranc
e
Stentor Coeruleus SteCoe_28156 0.000000000000012664165549094176
General Information
No Data fetched for General Information
Associated Literature
Ref:23884606 : Gao S, Xiong J, Zhang C, Berquist BR, Yang R, Zhao M, Molascon AJ, Kwiatkowski SY, Yuan D, Qin Z, Wen J, Kapler GM, Andrews PC, Miao W, Liu Y (2013) Impaired replication elongation in Tetrahymena mutants deficient in histone H3 Lys 27 monomethylation. Genes & development 27(15):1662-79
Sequences
>TTHERM_00684490(coding)ATG AAT CCA AAC TAT CCT TCA ATT AAA GTT AAG TAG TTA GCT TAC CAA AAG AAA TTT ATC CAA AGA TAA GAT AGT TTC TCT TCC TAA ACA AAT GAA AAC TCT CAA TAA AGT AGT AAA AGT TTT AGA TCC AAA GAT CCT GTT TTG GAG AAT ACA CCT ATT CAT CTC AAC ATT TTG CAT AAA GAT AAG CAT ACA AAA CTA AAT ATA AAC AAT ATT GAA GTT TAT TTT CCT CAT AAA CCT TAT GAT GTT TAA GTA GTA TAC ATG GAG AGT GTC ATA AAA TGT TTA TAA GAA AGA ACT CAC GGT TTA TTA GAA TCT CCG ACT GGT ACA GGA AAA ACT TTA TCT ATG CTT TGT GCG TGT TTA GGA TGG CTA TAA TAA AGG AGA GAG TAA TAA TAA GGA ATT AAA GAT ATT ATT CCA AAT AGA ATT ATT TAT TGC TCT AGA ACT CAT AGT TAA ATA TAG CAG GTA GTT AAA GAA ATA AAA ACA ACA GCT TAT TAG CCA AAG ATA ATA GTG TAA GGT TCA AGA GAG CAG TAT TGC ATT AAG AAA GAA TTT TAA TAG TTG AAA GGA GGT CTA CTA AAT ACT TCA TGC TAA AAA GCA ATT AGC CAA CTT AAT CCA CAA ACT TAC TGT AGA TAC TTT AAG GGA ACT ATG GAT GAA AGC AGA GAT TTT TTT AAA CTT AGA ATG CCA GAT ATA GAG GAC TTA AGA AGT GAT GGA TAT AAC AAT AAT TAC TGT CCC TTT TAT CAT ACC TAG AAA GTT AAC AAT GCA GTA GAT GTT CTT TTT CTT CCA TAT AAC TAT TTA CTT GAT AGA AAT GTG ATG AAT TAA GCT AAT ATA AAT ATA AAA AAC GCT GTA ATT ATA TTT GAT GAA GCT CAC AAT ATA CAC AAA TCA GCA GAA GAA GGT TAT TCT TTG TTT TTA AAC TAT TCT TCT TTG TGT GCT GCC GAA GCT GAT TTG CTA AAT CTT CTT AAG TAT ATT GAA AAT GGG TAT GTA GAT GAC TAA AAT AAT TCA ACT TCG CCT GCA CCT TTA GGT GCT GCA AAA AGA GGA ACA CCT ATC AAA GAG TTA AGC GAA TTC GAC ACA AAA AAT TTT ACT AGC TCC TCA TTT GAC TGT AAG GCA ATG CTT GGG CCG ATT TAG GAA TTA AGA AAT TAT TTT AAA CAA ATG GCC TTA AAA TAG ATA AGA GAA AAT TAA TAA AAC TAG TAT AAT GAA TAC AAC TGT GAT AAT ATT TAG ATT TAG AAT GGT AAA GAC ATA TTC GAA TTG ATC TAA ATC CAT ACA AGA ACA TCA AAA GAA TAA ATT AAT GAA AAT TCT GTT GAT AAA TAC ATG AAG GCT CTT GAT AAA TAA AAA GGC ACA TAA TTT GTT TCA TTT GAA AAC GGA TTG AGC TAA AGT AAT TTA GCA TAA TAT ATA GAC AAA GCT TAT AAA GCA ATT AAA GAC TTG AGT ATA GGA GCT TCA CAT CAT GGT CTA GAA ACT TGG GTC AAA TTC TTA GAA GGA TTA AAA GAT TTA TGG ACT AGT CAC AAT GAA TTT AAT TTA AAA ACG AAA AAG TCA GAC AAT CCT TCA TAG TTA TGT TAA ACT AAT GAT GTC ATG CAA GAC TAT AAG CTT TAT TTT GAT TTA GAA GAT CCA GAA AAT CCA TAA TTA AAT CTT ACT TGC CTT AAT CCC AGC TTG AAT TTC AAA AAA ATT CTT CAG TAA GAT CCT CAT TGC TTA CTT TTT ACC TCA GGA ACA TTA AAA CCA TTT AAT TTT TGG AAG ACT GAG TTG CAA ATT CCA TTT AAC GTA ATC CTT GAA AAT AAG CAT GTC ATA GAT TCG AAA AAG CAG CTT TTT TCT GCT GTG ATA AAA GGT AGA CCT TCA AAA TCA TCT GTT ATC ACA ACA TAT AAG CAA ACC TTT AAC TTT AGC TAT GAA AAA AGA AAG GAT TAA GAT ATG ATT TTA GAT CTT GGT AAT GCT CTA GCT GAA CTT TTT GAA ATT ATT CCG AAT GGT GTT TTA ATC GTT TTT CCA TCA AAT TAA CTA ATG AAT TAG TGT AGA TCT TAA TGG TCA AAT TTC TTT TCT AAT CAA AAT AGC AAC AAT TAA TAA TAA AAA ATA TAC AAT CGC TTA TTA TCA AAG AAA TTC ATT TAC TGG GAA GGA AAA ACT AAT ACT GAA ACA ATG AGT GCT ATG TAA GAT TTT AGA TAA AAG TCA AAA ACG TAA AAA GGT TCT GCA TTT TTT TGT GTA GCA AGA GGT AAA ATT ACA GAA GGT ATT GAC TTT GCT GAT GAA TCT GCA AGA GCA GTT ATT TTA ATA GGC TTA CCA TAT CCT CCA CTT AAA AAT ATC AAT ATA TAA GTA AAA AAA GAC TAT TTA AAT CAA TAA AGT AAA TTA AAT TCT TAA AGA ATA AAT GGA AAT GAA TGG TAT GTG CAA GAA GCC ATC AGA GCG ATG AAT TAA TCC ATT GGA AGA GTA ATT AGG CAT ATT AAC GAC TGG GGA AGT GTT ATA TTT TTA GAT GAA AGA TTT GGA CAA TAA GAT ATA ATA AAA CAC ATG CCT TCT TGG TGC TTA ACA CAA TAA ATT GAT TCA TTT GAT TAA GCT CTT ATA TAG TTA TCG CAA TTT TTT AGT GAG AAA AAA ATG GCC TCT AAA TAA AAA TAA GAG GAG CTA AGA AAA TAA ATT AAC TTA AAG AAA AAA GAT AAT TTA GAA TTA GAA TAA GCA GAA TAA TAA TCA TTT AGT AAT ACA TAA AAA CCA TAA CAT GGT ATT TAA GTA GTT TAA AAA AGG GCT TTT GAT TTT ACT TCT GTT AAA AGC TTA TAA AAT TAA ATT TAG AAG CCT TAG AAA CTT TTT AAA TAA AAT ATT TTA GTA AGC AAA GAT GAG GAA TCT CAA AAA AGT TAC TAA ACA CTT GAA AAA CCA GTC TAA AAT ATA AAA AAG AAT CCT TTT TGC TAA TCA TCT GAT GAT GAA GAA AAC TAA CCT GAG TAA AAA TTT TAA ATA GTT AAA CCT AGT TAA TCA ATA AAA TAA GAA AAT AAT TAA AAT ACT ACT TCA AGC TAA TTT GAT TTT TCT AAG CCA ATA AAA ATA AAA TCT TCT TAA GAT AAA ATT ATG ATT AAA AAC GTC TCT TCT AAT GTA AAT AAT TAA CAA AAT GTA ATG AGT ACA AAA AAT TCT ATT TAC ACA AAT AAA ATA TTT TTT GAA TCT TGA >TTHERM_00684490(protein)M N P N Y P S I K V K Q L A Y Q K K F I Q R Q D S F S S Q T N E N S Q Q S S K S F R S K D P V L E N T P I H L N I L H K D K H T K L N I N N I E V Y F P H K P Y D V Q V V Y M E S V I K C L Q E R T H G L L E S P T G T G K T L S M L C A C L G W L Q Q R R E Q Q Q G I K D I I P N R I I Y C S R T H S Q I Q Q V V K E I K T T A Y Q P K I I V Q G S R E Q Y C I K K E F Q Q L K G G L L N T S C Q K A I S Q L N P Q T Y C R Y F K G T M D E S R D F F K L R M P D I E D L R S D G Y N N N Y C P F Y H T Q K V N N A V D V L F L P Y N Y L L D R N V M N Q A N I N I K N A V I I F D E A H N I H K S A E E G Y S L F L N Y S S L C A A E A D L L N L L K Y I E N G Y V D D Q N N S T S P A P L G A A K R G T P I K E L S E F D T K N F T S S S F D C K A M L G P I Q E L R N Y F K Q M A L K Q I R E N Q Q N Q Y N E Y N C D N I Q I Q N G K D I F E L I Q I H T R T S K E Q I N E N S V D K Y M K A L D K Q K G T Q F V S F E N G L S Q S N L A Q Y I D K A Y K A I K D L S I G A S H H G L E T W V K F L E G L K D L W T S H N E F N L K T K K S D N P S Q L C Q T N D V M Q D Y K L Y F D L E D P E N P Q L N L T C L N P S L N F K K I L Q Q D P H C L L F T S G T L K P F N F W K T E L Q I P F N V I L E N K H V I D S K K Q L F S A V I K G R P S K S S V I T T Y K Q T F N F S Y E K R K D Q D M I L D L G N A L A E L F E I I P N G V L I V F P S N Q L M N Q C R S Q W S N F F S N Q N S N N Q Q Q K I Y N R L L S K K F I Y W E G K T N T E T M S A M Q D F R Q K S K T Q K G S A F F C V A R G K I T E G I D F A D E S A R A V I L I G L P Y P P L K N I N I Q V K K D Y L N Q Q S K L N S Q R I N G N E W Y V Q E A I R A M N Q S I G R V I R H I N D W G S V I F L D E R F G Q Q D I I K H M P S W C L T Q Q I D S F D Q A L I Q L S Q F F S E K K M A S K Q K Q E E L R K Q I N L K K K D N L E L E Q A E Q Q S F S N T Q K P Q H G I Q V V Q K R A F D F T S V K S L Q N Q I Q K P Q K L F K Q N I L V S K D E E S Q K S Y Q T L E K P V Q N I K K N P F C Q S S D D E E N Q P E Q K F Q I V K P S Q S I K Q E N N Q N T T S S Q F D F S K P I K I K S S Q D K I M I K N V S S N V N N Q Q N V M S T K N S I Y T N K I F F E S >TTHERM_00684490(gene)ATG AAT CCA AAC TAT CCT TCA ATT AAA GTT AAG TAG TTA GCT TAC CAA AAG AAA TTT ATC CAA AGA TAA GAT AGT TTC TCT TCC TAA ACA AAT GAA AAC TCT CAA TAA AGT AGT AAA AGT TTT AGA TCC AAA GAT CCT GTT TTG GAG AAT ACA CCT ATT CAT CTC AAC ATT TTG CAT AAA GAT AAG CAT ACA AAA CTA AAT ATA AAC AAT ATT GAA GTT TAT TTT CCT CAT AAA CCT TAT GAT GTT TAA GTA GTA TAC ATG GAG AGT GTC ATA AAA TGT TTA TAA GAA AGA ACT CAC GGT TTA TTA GAA TCT CCG ACT GGT ACA GGA AAA ACT TTA TCT ATG CTT TGT GCG TGT TTA GGA TGG CTA TAA TAA AGG AGA GAG TAA TAA TAA GGA ATT AAA GAT ATT ATT CCA AAT AGA ATT ATT TAT TGC TCT AGA ACT CAT AGT TAA ATA TAG CAG GTA GTT AAA GAA ATA AAA ACA ACA GCT TAT TAG CCA AAG ATA ATA GTG TAA GGT TCA AGA GAG CAG TAT TGC ATT AAG AAA GAA TTT TAA TAG TTG AAA GGA GGT CTA CTA AAT ACT TCA TGC TAA AAA GCA ATT AGC CAA GTA TGC TTT TAT TTA TTT TAA AAT TGT TAA TGA ATC TAA GAT TAT TTA TTG TTA GTC ATA AGC AAT TTT ATT TCT TAA TTG AAT GAA TTT TGA AAT AAT TTT ATT TAA AAT TTT TTA CTT TTA TAT TCT ATA GCT TAA TCC ACA AAC TTA CTG TAG ATA CTT TAA GGG AAC TAT GGA TGA AAG CAG AGA TTT TTT TAA ACT TAG AAT GCC AGA TAT AGA GGA CTT AAG AAG TGA TGG ATA TAA CAA TAA TTA CTG TCC CTT TTA TCA TAC CTA GAA AGT TAA CAA TGC AGT AGA TGT TCT TTT TCT TCC ATA TAA CTA TTT ACT TGA TAG AAA TGT GAT GAA TTA AGC TAA TAT AAA TAT AAA AAA CGC TGT AAT TAT ATT TGA TGA AGC TCA CAA TAT ACA CAA ATC AGC AGA AGA AGG TTA TTC TTT GTT TTT AAA CTA TTC TTC TTT GTG TGC TGC CGA AGC TGA TTT GCT AAA TCT TCT TAA GTA TAT TGA AAA TGG GTA TGT AGA TGA CTA AAA TAA TTC AAC TTC GCC TGC ACC TTT AGG TGC TGC AAA AAG AGG AAC ACC TAT CAA AGA GTT AAG CGA ATT CGA CAC AAA AAA TTT TAC TAG CTC CTC ATT TGA CTG TAA GGC AAT GCT TGG GCC GAT TTA GGA ATT AAG AAA TTA TTT TAA ACA AAT GGC CTT AAA ATA GAT AAG AGA AAA TTA ATA AAA CTA GTA TAA TGA ATA CAA CTG TGA TAA TAT TTA GAT TTA GAA TGG TAA AGA CAT ATT CGA ATT GAT CTA AAT CCA TAC AAG AAC ATC AAA AGA ATA AAT TAA TGA AAA TTC TGT TGA TAA ATA CAT GAA GGC TCT TGA TAA ATA AAA AGG CAC ATA ATT TGT TTC ATT TGA AAA CGG ATT GAG CTA AAG TAA TTT AGC ATA ATA TAT AGA CAA AGC TTA TAA AGC AAT TAA AGA CTT GAG TAT AGG AGC TTC ACA TCA TGG TCT AGA AAC TTG GGT CAA ATT CTT AGA AGG ATT AAA AGA TTT ATG GAC TAG TCA CAA TGA ATT TAA TTT AAA AAC GAA AAA GTC AGA CAA TCC TTC ATA GTT ATG TTA AAC TAA TGA TGT CAT GCA AGA CTA TAA GCT TTA TTT TGA TTT AGA AGA TCC AGA AAA TCC ATA ATT AAA TCT TAC TTG CCT TAA TCC CAG CTT GAA TTT CAA AAA AAT TCT TCA GTA AGA TCC TCA TTG CTT ACT TTT TAC CTC AGG AAC ATT AAA ACC ATT TAA TTT TTG GAA GAC TGA GTT GCA AAT TCC ATT TAA CGT AAT CCT TGA AAA TAA GCA TGT CAT AGA TTC GAA AAA GCA GCT TTT TTC TGC TGT GAT AAA AGG TAG ACC TTC AAA ATC ATC TGT TAT CAC AAC ATA TAA GCA AAC CTT TAA CTT TAG CTA TGA AAA AAG AAA GGA TTA AGA TAT GAT TTT AGA TCT TGG TAA TGC TCT AGC TGA ACT TTT TGA AAT TAT TCC GAA TGG TGT TTT AAT CGT TTT TCC ATC AAA TTA ACT AAT GAA TTA GTG TAG ATC TTA ATG GTC AAA TTT CTT TTC TAA TCA AAA TAG CAA CAA TTA ATA ATA AAA AAT ATA CAA TCG CTT ATT ATC AAA GAA ATT CAT TTA CTG GGA AGG AAA AAC TAA TAC TGA AAC AAT GAG TGC TAT GTA AGA TTT TAG ATA AAA GTC AAA AAC GTA AAA AGG TTC TGC ATT TTT TTG TGT AGC AAG AGG TAA AAT TAC AGA AGG TAT TGA CTT TGC TGA TGA ATC TGC AAG AGC AGT TAT TTT AAT AGG TAA ATA TTT AAA AAA ATC TAT TTA ATT TTT AAC ATA TTT ATT TTT TAC TAG GCT TAC CAT ATC CTC CAC TTA AAA ATA TCA ATA TAT AAG TAA AAA AAG ACT ATT TAA ATC AAT AAA GTA AAT TAA ATT CTT AAA GAA TAA ATG GAA ATG AAT GGT ATG TGC AAG AAG CCA TCA GAG CGA TGA ATT AAT CCA TTG GAA GAG TAA TTA GGC ATA TTA ACG ACT GGG GAA GTG TTA TAT TTT TAG ATG AAA GAT TTG GAC AAT AAG ATA TAA TAA AAC ACA TGC CTT CTT GGT GCT TAA CAC AAT AAA TTG ATT CAT TTG ATT AAG CTC TTA TAT AGT TAT CGC AAT TTT TTA GTG AGA AAA AAA TGG CCT CTA AAT AAA AAT AAG AGG AGC TAA GAA AAT AAA TTA ACT TAA AGA AAA AAG ATA ATT TAG AAT TAG AAT AAG CAG AAT AAT AAT CAT TTA GTA ATA CAT AAA AAC CAT AAC ATG GTA TTT AAG TAG TTT AAA AAA GGG CTT TTG ATT TTA CTT CTG TTA AAA GCT TAT AAA ATT AAA TTT AGA AGC CTT AGA AAC TTT TTA AAT AAA ATA TTT TAG TAA GCA AAG ATG AGG AAT CTC AAA AAA GTT ACT AAA CAC TTG AAA AAC CAG TCT AAA ATA TAA AAA AGA ATC CTT TTT GCT AAT CAT CTG ATG ATG AAG AAA ACT AAC CTG AGT AAA AAT TTT AAA TAG TTA AAC CTA GTT AAT CAA TAA AAT AAG AAA ATA ATT AAA ATA CTA CTT CAA GCT AAT TTG ATT TTT CTA AGC CAA TAA AAA TAA AAT CTT CTT AAG ATA AAA TTA TGA TTA AAA ACG TCT CTT CTA ATG TAA ATA ATT AAC AAA ATG TAA TGA GTA CAA AAA ATT CTA TTT ACA CAA ATA AAA TAT TTT TTG AAT CTT GA