Identifiers and Description
Gene Model Identifier
TTHERM_01122740Standard Name
RRP64 (exosome component RRP6-4)Aliases
PreTt24593 | 243.m00042Description
RRP64 3-prime-5-prime exonucleaseGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- intracellular (IEA) | GO:0005622
Molecular Function
- 3'-5' exonuclease activity (IEA) | GO:0008408
- nucleic acid binding (IEA) | GO:0003676
Biological Process
- nucleobase-containing compound metabolic process (IEA) | GO:0006139
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 9.9%
TetraMine Data
TTHERM_01122740
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_10594.1 9.997093137033517e-262 3-5 exonuclease (879 aa)
DictyBase DDB_G0271572 2.000383902553626e-98 exosc10 on chromosome: 2 posit
ion 601251 to 605014
Oxytricha Contig14024.0.g55 5.001102406662288e-90 3-5 exonuclease
SGD YOR001W 1.9996609186508915e-82 RRP6 Nuclear exosome exonuclea
se component; has 3-5 exonucle
ase activity; involved in RNA
processing, maturation, survei
llance, degradation, tethering
, and export; has similarity t
o E. coli RNase D and to human
PM-Sc1 100 (EXOSC10); mutant
displays reduced transcription
elongation in the G-less-base
d run-on (GLRO) assay
WormBase WBGene00000796 4.000989088096131e-71 locus:crn-3 status:Confirmed
UniProt:G5EBX6 protein_id
:CAA90108.1
Stentor Coeruleus SteCoe_9214 8.194012623990515e-40
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_01122740(coding)
ATGGCTAGCAATAATAAAATTAAGGATTTAGATGAAATTCTTAACTAAAAGGATTTCATG
AAGTAGGTTTTGTAGAAAGATGCAAGTCTTGTTCGTTTGAGTAACTCTCTTCCATAAAAT
GATGAAATGAAGTTTTACATGAACAATGAGCAACTAAAATAAAAGCAAAAGGCTATCAAT
GTTAAAATTCTCCACCAGTTAAAGAAAATAGCATCATTTATATAATTTGAGCAAGCTTCT
AGCATTGACTTAAACCATTTTAGCCATATCATAGACATGAATGATCTACTTTTTGAGAAT
ATCGACACTTCATTGGACAAAATTAAAAAAATTAATAATGTCACTGAGTCTTCTCTTTTC
GATCCTTCTAAGACTATATCCTCTGACAAGGGCTTCAAGCCTATTAGTGGGGAGGAATCC
GAAGACATAATCACAATAGCAACAAAAGAAAAACCTTAAAACCATTTTAAAGATTGCATT
GATAATTCAATAGAACATCCTTTCATTCCTGTCATCAAAGAAAAGCTAAATGCAGATGTT
CCATTAGATGATGTCATAGTTTAAGTATAGAGAGAGGGAGCTGAAAGCTTTTTTAAAACC
ATTTAAGACCCTTTATAATATGAATTTCCCCACCCTTATGCTTATGAAATTGAGAATTTC
AATTTCTCAGAGTAACAATTACAGACAGATAATATAATAGTTTAGGAGCCTATTAGTCTT
AAAGAGGAGTTAGTGTTTGTAGATAAAGAAGATATTTTAGACGAAATGATAGAGTCTCTG
AAGTAATGTAGCGAAGTAGCTATTGATTTAGAACACCATTCATATCGTTCATTCAACGGT
ATTACTTGCTTGATGCAGATTTCTAGCAGAACTAAAGACTACATTGTGGATGTCTTCAGT
GTATGGAAATCTCTACATAAGCTTAATGCAGTTACTACAGATAAAAATATTGTTAAAGTT
CTTCATGGTGCAGATATGGATATTCAATGGTTACAAAGAGATTTTGGAATTTATATTGTT
AATTTATTCGATACCGGATAAGCAGCCAGAACTTTATCTATGCCCAGCTATGCATTAGCT
TATCTTTTATAATCTATTTCAAAAGTACCCACAGATAAAAAGTACCAATTAGCTGATTGG
AGAATCCGTCCTCTCCCAAGAGAAATGATAAGTTATGCTAGATCAGATACACACTATTTG
TTATCAATTTATGACAATTTAAGAATTCAACTTGTAAGCAAAGCACTTTAGTAAGGATAA
AATGCTTCTCACTTTATTGAGAGTGTTCTGAATAAGTCTAGAGCTATTTGCCTCAAAAAG
TATGTCAAGCCAATTTTAGATGATGAAAAATATCACTCAATTTTACAAAATTAACGTATC
ATCTTATCTGACAGAAAGTTCCGCATTTTAAAAAGACTCCTCGAATGGAGATATAAAATG
GCTGCTAAATATGATGAAAATCCTACCTTTGTTTTAGCTAATGATATTCTTTTCAATATT
GTAAATAGACTACCCTAAACTCAGAAAGAGTTTGCATCTTCAAATCTTAAGCTTAGTTAC
GTATGCCAATATCATGCAAACGAAATTCTTTCTATTATTAAGGAAGAAATTGAATCTGAA
CAAAAGTCTAAATCTGGAGAATCAGAGAGTGCCACCAAAAATTAAAGTGAAATGGAAACT
GAAGATCTGATTTATGCCTCTCGTAACCATAATAATAACATATCAGGATACTAAATAATT
AACACTCAGAGTCACCAAATGGAGTAGGAGCTTGAAGATGAAGAGGTTTCCTTCAAATTT
GAAGTAATTGATGTATAAATTGGGGTGTATTAAGGCAATTTGAATATTTTAGAAGACCAC
ATACTATCATCTTCAACCTCTGCTGAAATATAATCAAAAATAGATAAAATTAATTCTTCT
TTCTTCTATGCAGATCCTGTAGATTTTTATTGCGAAAAATACCCTTTTATGAGAGAAGCT
TATGAACTCGCTAAATTGCAAGAAGAAGAAATTATGAAAAAAAGAAATGACCTGGCCTAC
ATTTAGAGTAAAAACCCATTTGAAGGTGAAAACGAAGGACAAACTAACAAGGAAGAAGAA
GAAAGAGATATTTATTTAGCATTTGATAAGGAAAAAGGACCTTCTTCTAAACCAAAAGAA
GTTGAACAAATAAATGTGCCTGATTTACCTCAATCTTATGAAGATTAGTTTAAAACAAGT
CTCAAAAAGAGAAAATATAATTTTGGCAATGAAGCAAAAAGAAACAACAACTAAGATGAA
GAGGGAGAAGAAGATAATGAAAATGGAGAAAAAATTTACAAAAAAAGATCTACTGGATAA
AAAAGTACATTCGATATGTTAATAGAGTAAGGTCTCAGAGAACAAACTGACTCTGAAGAA
TCAGATTCTGAAGAAGGTGAATAATAGTAGAAGAAGAAAAAAAGAGAGGTTACAGAAGAA
GAAAAAAAACAAATCGAAGATAATTTTAACCAGTTTGCAGATAAAATAAGAAATAGAATC
AATAAAGATCCTAAGTTTAAATCTGGTATCAATGCATAAAAAAAATTCAACAGTAGCAAT
AATAAAAAGGGTGGTAATAAAAAAAATAATAAGTTTATAAGCAAGTTCAACAAAAGCGGA
TTTTGA>TTHERM_01122740(protein)
MASNNKIKDLDEILNQKDFMKQVLQKDASLVRLSNSLPQNDEMKFYMNNEQLKQKQKAIN
VKILHQLKKIASFIQFEQASSIDLNHFSHIIDMNDLLFENIDTSLDKIKKINNVTESSLF
DPSKTISSDKGFKPISGEESEDIITIATKEKPQNHFKDCIDNSIEHPFIPVIKEKLNADV
PLDDVIVQVQREGAESFFKTIQDPLQYEFPHPYAYEIENFNFSEQQLQTDNIIVQEPISL
KEELVFVDKEDILDEMIESLKQCSEVAIDLEHHSYRSFNGITCLMQISSRTKDYIVDVFS
VWKSLHKLNAVTTDKNIVKVLHGADMDIQWLQRDFGIYIVNLFDTGQAARTLSMPSYALA
YLLQSISKVPTDKKYQLADWRIRPLPREMISYARSDTHYLLSIYDNLRIQLVSKALQQGQ
NASHFIESVLNKSRAICLKKYVKPILDDEKYHSILQNQRIILSDRKFRILKRLLEWRYKM
AAKYDENPTFVLANDILFNIVNRLPQTQKEFASSNLKLSYVCQYHANEILSIIKEEIESE
QKSKSGESESATKNQSEMETEDLIYASRNHNNNISGYQIINTQSHQMEQELEDEEVSFKF
EVIDVQIGVYQGNLNILEDHILSSSTSAEIQSKIDKINSSFFYADPVDFYCEKYPFMREA
YELAKLQEEEIMKKRNDLAYIQSKNPFEGENEGQTNKEEEERDIYLAFDKEKGPSSKPKE
VEQINVPDLPQSYEDQFKTSLKKRKYNFGNEAKRNNNQDEEGEEDNENGEKIYKKRSTGQ
KSTFDMLIEQGLREQTDSEESDSEEGEQQQKKKKREVTEEEKKQIEDNFNQFADKIRNRI
NKDPKFKSGINAQKKFNSSNNKKGGNKKNNKFISKFNKSGF>TTHERM_01122740(gene)
ATGGCTAGCAATAATAAAATTAAGGATTTAGATGAAATTCTTAACTAAAAGGATTTCATG
AAGTAGGTTTTGTAGAAAGATGCAAGTCTTGTTCGTTTGAGTAACTCTCTTCCATAAAAT
GATGAAATGAAGTTTTACATGAACAATGAGCAACTAAAATAAAAGCAAAAGGCTATCAAT
GTTAAAATTCTCCACCAGTTAAAGAAAATAGCATCATTTATATAATTTGAGCAAGCTTCT
AGCATTGACTTAAACCATTTTAGCCATATCATAGACATGAATGATCTACTTTTTGAGAAT
ATCGACACTTCATTGGACAAAATTAAAAAAATTAATAATGTCACTGAGTCTTCTCTTTTC
GATCCTTCTAAGACTATATCCTCTGACAAGGGCTTCAAGCCTATTAGTGGGGAGGAATCC
GAAGACATAATCACAATAGCAACAAAAGAAAAACCTTAAAACCATTTTAAAGATTGCATT
GATAATTCAATAGAACATCCTTTCATTCCTGTCATCAAAGAAAAGCTAAATGCAGATGTT
CCATTAGATGATGTCATAGTTTAAGTATAGAGAGAGGGAGCTGAAAGCTTTTTTAAAACC
ATTTAAGACCCTTTATAATATGAATTTCCCCACCCTTATGCTTATGAAATTGAGAATTTC
AATTTCTCAGAGTAACAATTACAGACAGATAATATAATAGTTTAGGAGCCTATTAGTCTT
AAAGAGGAGTTAGTGTTTGTAGATAAAGAAGATATTTTAGACGAAATGATAGAGTCTCTG
AAGTAATGTAGCGAAGTAGCTATTGATTTAGAACACCATTCATATCGTTCATTCAACGGT
ATTACTTGCTTGATGCAGATTTCTAGCAGAACTAAAGACTACATTGTGGATGTCTTCAGT
GTATGGAAATCTCTACATAAGCTTAATGCAGTTACTACAGATAAAAATATTGTTAAAGTT
CTTCATGGTGCAGATATGGATATTCAATGGTTACAAAGAGATTTTGGAATTTATATTGTT
AATTTATTCGATACCGGATAAGCAGCCAGAACTTTATCTATGCCCAGCTATGCATTAGCT
TATCTTTTATAATCTATTTCAAAAGTACCCACAGATAAAAAGTACCAATTAGCTGATTGG
AGAATCCGTCCTCTCCCAAGAGAAATGATAAGTTATGCTAGATCAGATACACACTATTTG
TTATCAATTTATGACAATTTAAGAATTCAACTTGTAAGCAAAGCACTTTAGTAAGGATAA
AATGCTTCTCACTTTATTGAGAGTGTTCTGAATAAGTCTAGAGCTATTTGCCTCAAAAAG
TATGTCAAGCCAATTTTAGATGATGAAAAATATCACTCAATTTTACAAAATTAACGTATC
ATCTTATCTGACAGAAAGTTCCGCATTTTAAAAAGACTCCTCGAATGGAGATATAAAATG
GCTGCTAAATATGATGAAAATCCTACCTTTGTTTTAGCTAATGATATTCTTTTCAATATT
GTAAATAGACTACCCTAAACTCAGAAAGAGTTTGCATCTTCAAATCTTAAGCTTAGTTAC
GTATGCCAATATCATGCAAACGAAATTCTTTCTATTATTAAGGAAGAAATTGAATCTGAA
CAAAAGTCTAAATCTGGAGAATCAGAGAGTGCCACCAAAAATTAAAGTGAAATGGAAACT
GAAGATCTGATTTATGCCTCTCGTAACCATAATAATAACATATCAGGATACTAAATAATT
AACACTCAGAGTCACCAAATGGAGTAGGAGCTTGAAGATGAAGAGGTTTCCTTCAAATTT
GAAGTAATTGATGTATAAATTGGGGTGTATTAAGGCAATTTGAATATTTTAGAAGACCAC
ATACTATCATCTTCAACCTCTGCTGAAATATAATCAAAAATAGATAAAATTAATTCTTCT
TTCTTCTATGCAGATCCTGTAGATTTTTATTGCGAAAAATACCCTTTTATGAGAGAAGCT
TATGAACTCGCTAAATTGCAAGAAGAAGAAATTATGAAAAAAAGAAATGACCTGGCCTAC
ATTTAGAGTAAAAACCCATTTGAAGGTGAAAACGAAGGACAAACTAACAAGGAAGAAGAA
GAAAGAGATATTTATTTAGCATTTGATAAGGAAAAAGGACCTTCTTCTAAACCAAAAGAA
GTTGAACAAATAAATGTGCCTGATTTACCTCAATCTTATGAAGATTAGTTTAAAACAAGT
CTCAAAAAGAGAAAATATAATTTTGGCAATGAAGCAAAAAGAAACAACAACTAAGATGAA
GAGGGAGAAGAAGATAATGAAAATGGAGAAAAAATTTACAAAAAAAGATCTACTGGATAA
AAAAGTACATTCGATATGTTAATAGAGTAAGGTCTCAGAGAACAAACTGACTCTGAAGAA
TCAGATTCTGAAGAAGGTGAATAATAGTAGAAGAAGAAAAAAAGAGAGGTTACAGAAGAA
GAAAAAAAACAAATCGAAGATAATTTTAACCAGTTTGCAGATAAAATAAGAAATAGAATC
AATAAAGATCCTAAGTTTAAATCTGGTATCAATGCATAAAAAAAATTCAACAGTAGCAAT
AATAAAAAGGGTGGTAATAAAAAAAATAATAAGTTTATAAGCAAGTTCAACAAAAGCGGA
TTTTGA