Identifiers and Description

Gene Model Identifier

TTHERM_01122740

Standard Name

RRP64 (exosome component RRP6-4)

Aliases

PreTt24593 | 243.m00042

Description

3'-5' exonuclease family protein

Genome Browser (Macronucleus)

GBrowse

Genome Browser (Micronucleus)

GBrowse

Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

  • nucleobase-containing compound metabolic process (IEA) | GO:0006139

Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

TetraMine Data

TTHERM_01122740

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_10594.19.997093137033517e-2623-5 exonuclease (879 aa)
DictyBaseDDB_G02715722.000383902553626e-98exosc10 on chromosome: 2 posit
ion 601251 to 605014
OxytrichaContig14024.0.g555.001102406662288e-903-5 exonuclease
SGDYOR001W1.9996609186508915e-82RRP6 Nuclear exosome exonuclea
se component; has 3-5 exonucle
ase activity; involved in RNA
processing, maturation, survei
llance, degradation, tethering
, and export; has similarity t
o E. coli RNase D and to human
PM-Sc1 100 (EXOSC10); mutant
displays reduced transcription
elongation in the G-less-base
d run-on (GLRO) assay
WormBaseWBGene000007964.000989088096131e-71locus:crn-3 status:Confirmed
UniProt:G5EBX6 protein_id
:CAA90108.1
Stentor CoeruleusSteCoe_92148.194012623990515e-40

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_01122740(coding)
ATGGCTAGCAATAATAAAATTAAGGATTTAGATGAAATTCTTAACTAAAAGGATTTCATG
AAGTAGGTTTTGTAGAAAGATGCAAGTCTTGTTCGTTTGAGTAACTCTCTTCCATAAAAT
GATGAAATGAAGTTTTACATGAACAATGAGCAACTAAAATAAAAGCAAAAGGCTATCAAT
GTTAAAATTCTCCACCAGTTAAAGAAAATAGCATCATTTATATAATTTGAGCAAGCTTCT
AGCATTGACTTAAACCATTTTAGCCATATCATAGACATGAATGATCTACTTTTTGAGAAT
ATCGACACTTCATTGGACAAAATTAAAAAAATTAATAATGTCACTGAGTCTTCTCTTTTC
GATCCTTCTAAGACTATATCCTCTGACAAGGGCTTCAAGCCTATTAGTGGGGAGGAATCC
GAAGACATAATCACAATAGCAACAAAAGAAAAACCTTAAAACCATTTTAAAGATTGCATT
GATAATTCAATAGAACATCCTTTCATTCCTGTCATCAAAGAAAAGCTAAATGCAGATGTT
CCATTAGATGATGTCATAGTTTAAGTATAGAGAGAGGGAGCTGAAAGCTTTTTTAAAACC
ATTTAAGACCCTTTATAATATGAATTTCCCCACCCTTATGCTTATGAAATTGAGAATTTC
AATTTCTCAGAGTAACAATTACAGACAGATAATATAATAGTTTAGGAGCCTATTAGTCTT
AAAGAGGAGTTAGTGTTTGTAGATAAAGAAGATATTTTAGACGAAATGATAGAGTCTCTG
AAGTAATGTAGCGAAGTAGCTATTGATTTAGAACACCATTCATATCGTTCATTCAACGGT
ATTACTTGCTTGATGCAGATTTCTAGCAGAACTAAAGACTACATTGTGGATGTCTTCAGT
GTATGGAAATCTCTACATAAGCTTAATGCAGTTACTACAGATAAAAATATTGTTAAAGTT
CTTCATGGTGCAGATATGGATATTCAATGGTTACAAAGAGATTTTGGAATTTATATTGTT
AATTTATTCGATACCGGATAAGCAGCCAGAACTTTATCTATGCCCAGCTATGCATTAGCT
TATCTTTTATAATCTATTTCAAAAGTACCCACAGATAAAAAGTACCAATTAGCTGATTGG
AGAATCCGTCCTCTCCCAAGAGAAATGATAAGTTATGCTAGATCAGATACACACTATTTG
TTATCAATTTATGACAATTTAAGAATTCAACTTGTAAGCAAAGCACTTTAGTAAGGATAA
AATGCTTCTCACTTTATTGAGAGTGTTCTGAATAAGTCTAGAGCTATTTGCCTCAAAAAG
TATGTCAAGCCAATTTTAGATGATGAAAAATATCACTCAATTTTACAAAATTAACGTATC
ATCTTATCTGACAGAAAGTTCCGCATTTTAAAAAGACTCCTCGAATGGAGATATAAAATG
GCTGCTAAATATGATGAAAATCCTACCTTTGTTTTAGCTAATGATATTCTTTTCAATATT
GTAAATAGACTACCCTAAACTCAGAAAGAGTTTGCATCTTCAAATCTTAAGCTTAGTTAC
GTATGCCAATATCATGCAAACGAAATTCTTTCTATTATTAAGGAAGAAATTGAATCTGAA
CAAAAGTCTAAATCTGGAGAATCAGAGAGTGCCACCAAAAATTAAAGTGAAATGGAAACT
GAAGATCTGATTTATGCCTCTCGTAACCATAATAATAACATATCAGGATACTAAATAATT
AACACTCAGAGTCACCAAATGGAGTAGGAGCTTGAAGATGAAGAGGTTTCCTTCAAATTT
GAAGTAATTGATGTATAAATTGGGGTGTATTAAGGCAATTTGAATATTTTAGAAGACCAC
ATACTATCATCTTCAACCTCTGCTGAAATATAATCAAAAATAGATAAAATTAATTCTTCT
TTCTTCTATGCAGATCCTGTAGATTTTTATTGCGAAAAATACCCTTTTATGAGAGAAGCT
TATGAACTCGCTAAATTGCAAGAAGAAGAAATTATGAAAAAAAGAAATGACCTGGCCTAC
ATTTAGAGTAAAAACCCATTTGAAGGTGAAAACGAAGGACAAACTAACAAGGAAGAAGAA
GAAAGAGATATTTATTTAGCATTTGATAAGGAAAAAGGACCTTCTTCTAAACCAAAAGAA
GTTGAACAAATAAATGTGCCTGATTTACCTCAATCTTATGAAGATTAGTTTAAAACAAGT
CTCAAAAAGAGAAAATATAATTTTGGCAATGAAGCAAAAAGAAACAACAACTAAGATGAA
GAGGGAGAAGAAGATAATGAAAATGGAGAAAAAATTTACAAAAAAAGATCTACTGGATAA
AAAAGTACATTCGATATGTTAATAGAGTAAGGTCTCAGAGAACAAACTGACTCTGAAGAA
TCAGATTCTGAAGAAGGTGAATAATAGTAGAAGAAGAAAAAAAGAGAGGTTACAGAAGAA
GAAAAAAAACAAATCGAAGATAATTTTAACCAGTTTGCAGATAAAATAAGAAATAGAATC
AATAAAGATCCTAAGTTTAAATCTGGTATCAATGCATAAAAAAAATTCAACAGTAGCAAT
AATAAAAAGGGTGGTAATAAAAAAAATAATAAGTTTATAAGCAAGTTCAACAAAAGCGGA
TTTTGA


>TTHERM_01122740(protein)
MASNNKIKDLDEILNQKDFMKQVLQKDASLVRLSNSLPQNDEMKFYMNNEQLKQKQKAIN
VKILHQLKKIASFIQFEQASSIDLNHFSHIIDMNDLLFENIDTSLDKIKKINNVTESSLF
DPSKTISSDKGFKPISGEESEDIITIATKEKPQNHFKDCIDNSIEHPFIPVIKEKLNADV
PLDDVIVQVQREGAESFFKTIQDPLQYEFPHPYAYEIENFNFSEQQLQTDNIIVQEPISL
KEELVFVDKEDILDEMIESLKQCSEVAIDLEHHSYRSFNGITCLMQISSRTKDYIVDVFS
VWKSLHKLNAVTTDKNIVKVLHGADMDIQWLQRDFGIYIVNLFDTGQAARTLSMPSYALA
YLLQSISKVPTDKKYQLADWRIRPLPREMISYARSDTHYLLSIYDNLRIQLVSKALQQGQ
NASHFIESVLNKSRAICLKKYVKPILDDEKYHSILQNQRIILSDRKFRILKRLLEWRYKM
AAKYDENPTFVLANDILFNIVNRLPQTQKEFASSNLKLSYVCQYHANEILSIIKEEIESE
QKSKSGESESATKNQSEMETEDLIYASRNHNNNISGYQIINTQSHQMEQELEDEEVSFKF
EVIDVQIGVYQGNLNILEDHILSSSTSAEIQSKIDKINSSFFYADPVDFYCEKYPFMREA
YELAKLQEEEIMKKRNDLAYIQSKNPFEGENEGQTNKEEEERDIYLAFDKEKGPSSKPKE
VEQINVPDLPQSYEDQFKTSLKKRKYNFGNEAKRNNNQDEEGEEDNENGEKIYKKRSTGQ
KSTFDMLIEQGLREQTDSEESDSEEGEQQQKKKKREVTEEEKKQIEDNFNQFADKIRNRI
NKDPKFKSGINAQKKFNSSNNKKGGNKKNNKFISKFNKSGF


>TTHERM_01122740(gene)
ATGGCTAGCAATAATAAAATTAAGGATTTAGATGAAATTCTTAACTAAAAGGATTTCATG
AAGTAGGTTTTGTAGAAAGATGCAAGTCTTGTTCGTTTGAGTAACTCTCTTCCATAAAAT
GATGAAATGAAGTTTTACATGAACAATGAGCAACTAAAATAAAAGCAAAAGGCTATCAAT
GTTAAAATTCTCCACCAGTTAAAGAAAATAGCATCATTTATATAATTTGAGCAAGCTTCT
AGCATTGACTTAAACCATTTTAGCCATATCATAGACATGAATGATCTACTTTTTGAGAAT
ATCGACACTTCATTGGACAAAATTAAAAAAATTAATAATGTCACTGAGTCTTCTCTTTTC
GATCCTTCTAAGACTATATCCTCTGACAAGGGCTTCAAGCCTATTAGTGGGGAGGAATCC
GAAGACATAATCACAATAGCAACAAAAGAAAAACCTTAAAACCATTTTAAAGATTGCATT
GATAATTCAATAGAACATCCTTTCATTCCTGTCATCAAAGAAAAGCTAAATGCAGATGTT
CCATTAGATGATGTCATAGTTTAAGTATAGAGAGAGGGAGCTGAAAGCTTTTTTAAAACC
ATTTAAGACCCTTTATAATATGAATTTCCCCACCCTTATGCTTATGAAATTGAGAATTTC
AATTTCTCAGAGTAACAATTACAGACAGATAATATAATAGTTTAGGAGCCTATTAGTCTT
AAAGAGGAGTTAGTGTTTGTAGATAAAGAAGATATTTTAGACGAAATGATAGAGTCTCTG
AAGTAATGTAGCGAAGTAGCTATTGATTTAGAACACCATTCATATCGTTCATTCAACGGT
ATTACTTGCTTGATGCAGATTTCTAGCAGAACTAAAGACTACATTGTGGATGTCTTCAGT
GTATGGAAATCTCTACATAAGCTTAATGCAGTTACTACAGATAAAAATATTGTTAAAGTT
CTTCATGGTGCAGATATGGATATTCAATGGTTACAAAGAGATTTTGGAATTTATATTGTT
AATTTATTCGATACCGGATAAGCAGCCAGAACTTTATCTATGCCCAGCTATGCATTAGCT
TATCTTTTATAATCTATTTCAAAAGTACCCACAGATAAAAAGTACCAATTAGCTGATTGG
AGAATCCGTCCTCTCCCAAGAGAAATGATAAGTTATGCTAGATCAGATACACACTATTTG
TTATCAATTTATGACAATTTAAGAATTCAACTTGTAAGCAAAGCACTTTAGTAAGGATAA
AATGCTTCTCACTTTATTGAGAGTGTTCTGAATAAGTCTAGAGCTATTTGCCTCAAAAAG
TATGTCAAGCCAATTTTAGATGATGAAAAATATCACTCAATTTTACAAAATTAACGTATC
ATCTTATCTGACAGAAAGTTCCGCATTTTAAAAAGACTCCTCGAATGGAGATATAAAATG
GCTGCTAAATATGATGAAAATCCTACCTTTGTTTTAGCTAATGATATTCTTTTCAATATT
GTAAATAGACTACCCTAAACTCAGAAAGAGTTTGCATCTTCAAATCTTAAGCTTAGTTAC
GTATGCCAATATCATGCAAACGAAATTCTTTCTATTATTAAGGAAGAAATTGAATCTGAA
CAAAAGTCTAAATCTGGAGAATCAGAGAGTGCCACCAAAAATTAAAGTGAAATGGAAACT
GAAGATCTGATTTATGCCTCTCGTAACCATAATAATAACATATCAGGATACTAAATAATT
AACACTCAGAGTCACCAAATGGAGTAGGAGCTTGAAGATGAAGAGGTTTCCTTCAAATTT
GAAGTAATTGATGTATAAATTGGGGTGTATTAAGGCAATTTGAATATTTTAGAAGACCAC
ATACTATCATCTTCAACCTCTGCTGAAATATAATCAAAAATAGATAAAATTAATTCTTCT
TTCTTCTATGCAGATCCTGTAGATTTTTATTGCGAAAAATACCCTTTTATGAGAGAAGCT
TATGAACTCGCTAAATTGCAAGAAGAAGAAATTATGAAAAAAAGAAATGACCTGGCCTAC
ATTTAGAGTAAAAACCCATTTGAAGGTGAAAACGAAGGACAAACTAACAAGGAAGAAGAA
GAAAGAGATATTTATTTAGCATTTGATAAGGAAAAAGGACCTTCTTCTAAACCAAAAGAA
GTTGAACAAATAAATGTGCCTGATTTACCTCAATCTTATGAAGATTAGTTTAAAACAAGT
CTCAAAAAGAGAAAATATAATTTTGGCAATGAAGCAAAAAGAAACAACAACTAAGATGAA
GAGGGAGAAGAAGATAATGAAAATGGAGAAAAAATTTACAAAAAAAGATCTACTGGATAA
AAAAGTACATTCGATATGTTAATAGAGTAAGGTCTCAGAGAACAAACTGACTCTGAAGAA
TCAGATTCTGAAGAAGGTGAATAATAGTAGAAGAAGAAAAAAAGAGAGGTTACAGAAGAA
GAAAAAAAACAAATCGAAGATAATTTTAACCAGTTTGCAGATAAAATAAGAAATAGAATC
AATAAAGATCCTAAGTTTAAATCTGGTATCAATGCATAAAAAAAATTCAACAGTAGCAAT
AATAAAAAGGGTGGTAATAAAAAAAATAATAAGTTTATAAGCAAGTTCAACAAAAGCGGA
TTTTGA