Identifiers and Description
Gene Model Identifier
TTHERM_00630440Standard Name
RRP63 (exosome component RRP6-3)Aliases
PreTt06557 | 89.m00151 | 3831.m01452Description
3'-5' exonuclease family proteinGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- intracellular (IEA) | GO:0005622
Molecular Function
- 3'-5' exonuclease activity (IEA) | GO:0008408
- nucleic acid binding (IEA) | GO:0003676
Biological Process
- nucleobase-containing compound metabolic process (IEA) | GO:0006139
Domains
No Data fetched for Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 9.9%
TetraMine Data
TTHERM_00630440
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_04332.1 9.997093137033517e-262 3-5 exonuclease (506 aa)
Oxytricha Contig8740.0.1.g10 3.00017180903994e-49 3-5 exonuclease
Stentor Coeruleus SteCoe_7112 2.031092662734811e-42 DictyBase DDB_G0278079 2.0003218023735366e-33 exdl2A on chromosome: 3 positi
on 242964 to 245120
SGD YOR001W 2.000470901975128e-28 RRP6 Nuclear exosome exonuclea
se component; has 3-5 exonucle
ase activity; involved in RNA
processing, maturation, survei
llance, degradation, tethering
, and export; has similarity t
o E. coli RNase D and to human
PM-Sc1 100 (EXOSC10); mutant
displays reduced transcription
elongation in the G-less-base
d run-on (GLRO) assay
WormBase WBGene00000796 4.9988726541653934e-26 locus:crn-3 status:Confirmed
UniProt:G5EBX6 protein_id
:CAA90108.1
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00630440(coding)
ATGAGTGTTAAAAATAAGTATAATATATAAGACTTCGTAAATTCAAACTATTGTGAAACT
AAACCATTTTATAATGGTTAATATATTTTAGTTTAAACAAAAGAGCAACTCCGCGAATGC
ATTTAAGAGATCAAACAGTTTAACAAAATAGGAGTTGATACAGAATAGAGCTTCATGCAG
ACTTATTAGGCCTTTCTTTGTTTAATTTAAATATCTACTGAAGAGAAAGATTATCTGATT
GATTTACTCTCAATAAATGACAAATAATATATTAAGTCAGAGATTGAGTAAATATTCCTG
GATAAAAATATAATTAAAATTTTTTATGCAGGATAAACTGATATCGTATGGCTATAAAGA
GACTATGATATTTTAATATCTAACTATTTTGATATTTAAACTGCTGCAATATTTTTAAAT
AAGGATGAAAGCTGGTCTTTAACTTATCTTCTTTAAAAATACTGCGACTATACTCTTGAA
AAGAAAGAGAAGAAATAACTTTAACTTTCAGAATGGTCTGATCGCCCACTAAGTGAAGAA
TAATTAAATTATGCAGCTCTCGACTCTCATTTCTTAATAAAAATAAGATACGAGCTACTT
CACGAAATGATCAAAAGACTGGATTTCTAAAGAACACTAGAACTTCTTTACAAAATGCAG
AAAGCTACATCTAAAAAATATGAGAAAAAGCCATTTGATGAGTTATTTTACTTCTAAGCT
TTCGAAAAGTAATCTAAAATTTAGGTTAATAGTATTGGAGCTGGGCTTAAGAGTACAACA
GAATGGAAAATTCTTAATATAATTTTCTTAGAACTTGCAGAATTGAGAGAGAGTTACTCT
GAATAGTAAAATAGATATATTCAAAGTGTTTTAACAGAAGAATCATTGCTGCAAATAGCT
TATTCTACCTTTGATGAAATATAATATAAATTAAAAAGTGTATACGAAATTCAAAACTAA
GACTAATTTACTGAAAAGCATTCTTAAGATTTCTTGAATTCAAATAAGGAGAAAATAATT
TCAATTCTAAATAGACACACAATTGAATTAGATAAAATTATTGAGAAATACGAATTGCTA
TGCATACCAATTAAAAATAAAATGCATATCCTTCAGCAAAGAATTGAGAGGAAAAATAAG
ACATTCTAAGAAAAATACTCGATGAAGACTGTACCTTACGAAAACTGCTAAATACTTTCA
CCAGATGGACAGCAATTATGTAACTGTAACAGTAAAAAAATTTAATGGTATCTTAAGAAA
GGGTTAGCTCATCTTGTAAGCGAAAATCCTACAGTTATCAAACTTAACTTCTAGCCAAGT
GGAAAGGGAAATTTTGATTTGGAGGATTAGAAGATCTTTGAAAACAATTACTATTATGTA
ACAGAAAGAGAAAACAAATGTGTTGTCTGTGGTTCTACAGAAAAATTTGCTAAATTTTAC
GTTATTCCATCTCTCTATAGGCGTCATTTTCCAGATATTTTGAAGAGTCATAGATCTTAG
GATATACTGCTTTTGTGTATGAATTGCCATCAAAGAGCAGGAACTTACTGTGATAAAAAG
ATTGACGAAATTTGTTAGTAATATCAAGTTGATAAAATTAGTTTGTAGTATGCTTCAGTG
GTGTAAGACGTTATCTAAAGATTGAGCAGGAGTGCTAGGTCTTTCCAGAAAAATAAGTCT
CATATGCCCAAAGAGAATAAGAAGAAACTAAAATCAATAATTAGATAGAACTATTAGGAT
TTTATAGAGTTAAAGGATATTCAATAAAAGATAGATATTCACCCTGATTCTTATTTTGGA
ATTAACAAGTAAAATTAAATTAAGATTAATGATAAGTTTATATCATATTGCTTGGAAATT
GATAACTTTAAAAAAATTGGTAAAGAGAATTCATGTAATGATTTTAAGAATTAGCATGGT
AAATATGTAGTAGAATAACTTAAAAACTTAAAAGATCTTACTGAATTTGTTCTTATGTGG
CGTTAGTATTTCATTAAAACAATGTAGCCTAAATATTTACCAAGAGATTGGACAGAAAAG
CCTAAAAGAGTAGAACCAGATAACGAAAGTAAATATGATAAAAAGCTTGAATAGATTCAA
ATATTTTCAAACTAATGA>TTHERM_00630440(protein)
MSVKNKYNIQDFVNSNYCETKPFYNGQYILVQTKEQLRECIQEIKQFNKIGVDTEQSFMQ
TYQAFLCLIQISTEEKDYLIDLLSINDKQYIKSEIEQIFLDKNIIKIFYAGQTDIVWLQR
DYDILISNYFDIQTAAIFLNKDESWSLTYLLQKYCDYTLEKKEKKQLQLSEWSDRPLSEE
QLNYAALDSHFLIKIRYELLHEMIKRLDFQRTLELLYKMQKATSKKYEKKPFDELFYFQA
FEKQSKIQVNSIGAGLKSTTEWKILNIIFLELAELRESYSEQQNRYIQSVLTEESLLQIA
YSTFDEIQYKLKSVYEIQNQDQFTEKHSQDFLNSNKEKIISILNRHTIELDKIIEKYELL
CIPIKNKMHILQQRIERKNKTFQEKYSMKTVPYENCQILSPDGQQLCNCNSKKIQWYLKK
GLAHLVSENPTVIKLNFQPSGKGNFDLEDQKIFENNYYYVTERENKCVVCGSTEKFAKFY
VIPSLYRRHFPDILKSHRSQDILLLCMNCHQRAGTYCDKKIDEICQQYQVDKISLQYASV
VQDVIQRLSRSARSFQKNKSHMPKENKKKLKSIIRQNYQDFIELKDIQQKIDIHPDSYFG
INKQNQIKINDKFISYCLEIDNFKKIGKENSCNDFKNQHGKYVVEQLKNLKDLTEFVLMW
RQYFIKTMQPKYLPRDWTEKPKRVEPDNESKYDKKLEQIQIFSNQ>TTHERM_00630440(gene)
ATGAGTGTTAAAAATAAGTATAATATATAAGACTTCGTAAATTCAAACTATTGTGAAACT
AAACCATTTTATAATGGTTAATATATTTTAGTTTAAACAAAAGAGCAACTCCGCGAATGC
ATTTAAGAGATCAAACAGTTTAACAAAATAGGTATTATTTAAAAATTTTTTTTACCAATC
ATTCAATAAATCATTAAAAATATTTATATATTTATTTATTTATTAATTATAAAAGGAGTT
GATACAGAATAGAGCTTCATGCAGACTTATTAGGCCTTTCTTTGTTTAATTTAAATATCT
ACTGAAGAGAAAGATTATCTGATTGATTTACTCTCAATAAATGACAAATAATATATTAAG
TCAGAGATTGAGTAAATATTCCTGGATAAAAATATAATTAAAATTTTTTATGCAGGATAA
ACTGATATCGTATGGCTATAAAGAGACTATGATATTTTAATATCTAACTATTTTGATATT
TAAACTGCTGCAATATTTTTAAATAAGGATGAAAGCTGGTCTTTAACTTATCTTCTTTAA
AAATACTGCGACTATACTCTTGAAAAGAAAGAGAAGAAATAACTTTAAGTAGAATTTCTT
TATTTGTTTATTTGTTTTATTAACTTCTATTTTTAATTGTTGATAAAAATTAGCTTTCAG
AATGGTCTGATCGCCCACTAAGTGAAGAATAATTAAATTATGCAGCTCTCGACTCTCATT
TCTTAATAAAAATAAGATACGAGCTACTTCACGAAATGATCAAAAGACTGGATTTCTAAA
GAACACTAGAACTTCTTTACAAAATGCAGAAAGCTACATCTAAAAAATATGAGAAAAAGC
CATTTGATGAGTTATTTTACTTCTAAGCTTTCGAAAAGTAATCTAAAATTTAGGTTAATA
GTATTGGAGCTGGGCTTAAGAGTACAACAGAATGGAAAATTCTTAATATAATTTTCTTAG
AACTTGCAGAATTGAGAGAGAGTTACTCTGAATAGTAAAATAGATATATTCAAAGTGTTT
TAACAGAAGAATCATTGCTGCAAATAGCTTATTCTACCTTTGATGAAATATAATATAAAT
TAAAAAGTGTATACGAAATTCAAAACTAAGACTAATTTACTGAAAAGCATTCTTAAGATT
TCTTGAATTCAAATAAGGAGAAAATAATTTCAATTCTAAATAGACACACAATTGAATTAG
ATAAAATTATTGAGAAATACGAATTGCTATGCATACCAATTAAAAATAAAATGCATATCC
TTCAGCAAAGAATTGAGAGGAAAAATAAGACATTCTAAGAAAAATACTCGATGAAGACTG
TACCTTACGAAAACTGCTAAATACTTTCACCAGATGGACAGCAATTATGTAACTGTAACA
GTAAAAAAATTTAATGGTATCTTAAGAAAGGGTTAGCTCATCTTGTAAGCGAAAATCCTA
CAGTTATCAAACTTAACTTCTAGCCAAGTGGAAAGGGAAATTTTGATTTGGAGGATTAGA
AGATCTTTGAAAACAATTACTATTATGTAACAGAAAGAGAAAACAAATGTGTTGTCTGTG
GTTCTACAGAAAAATTTGCTAAATTTTACGTTATTCCATCTCTCTATAGGCGTCATTTTC
CAGATATGTAACAAATCAATTTCACAAAAATTTTTGTTTCACCTTTAATAAATTATTTGC
AATGAGGTTTTATTTAATTAAAAATTATATTAATTAAATTTAGAAATACTGTAATTTTTA
TACACTTCCCTCCTCCATGAACCCTCCTAATTTTTTATCTATAAAGGCTAAACAAGCCAT
TAAATTTTAAAATTTAAAGAAAATGGAAGGGCTAAAACTAGAATAATTACAGTACTTAGA
ACTTTAAATTTTAATTGAAAATAAAAAAAATAATTGAAAGTATTCAATAGTTTAATGAAG
GACTATTCAAACATGAAATATATTTTACAAATCAAATAAAATTAAAATAAATTTTTGAAT
ATAAAAAAATTAGTTTGAAGAGTCATAGATCTTAGGATATACTGCTTTTGTGTATGAATT
GCCATCAAAGAGCAGGAACTTACTGTGATAAAAAGATTGACGAAATTTGTTAGTAATATC
AAGTTGATAAAATTAGTTTGTAGTATGCTTCAGTGGTGTAAGACGTTATCTAAAGATTGA
GCAGGAGTGCTAGGTCTTTCCAGAAAAATAAGTCTCATATGCCCAAAGAGAATAAGAAGA
AACTAAAATCAATAATTAGATAGAACTATTAGGATTTTATAGAGTTAAAGGATATTCAAT
AAAAGATAGATATTCACCCTGATTCTTATTTTGGAATTAACAAGTAAAATTAAATTAAGA
TTAATGATAAGTTTATATCATATTGCTTGGAAATTGATAACTTTAAAAAAATTGGTAAAG
AGAATTCATGTAATGATTTTAAGAATTAGCATGGTAAATATGTAGTAGAATAACTTAAAA
ACTTAAAAGATCTTACTGAATTTGTTCTTATGTGGCGTTAGTATTTCATTAAAACAATGT
AGCCTAAATATTTACCAAGAGATTGGACAGAAAAGCCTAAAAGAGTAGAACCAGATAACG
AAAGTAAATATGATAAAAAGCTTGAATAGATTCAAATATTTTCAAACTAATGA