Identifiers and Description

Gene Model Identifier

TTHERM_00463140

Standard Name

RRP45 (exosome component RRP45)

Aliases

PreTt25766 | 54.m00222 | 3823.m01134

Description

exosome component RRP45

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Molecular Function

• RNA binding (IEA) | GO:0003723
• 3'-5'-exoribonuclease activity (IEA) | GO:0000175

Biological Process

• RNA processing (IEA) | GO:0006396

Domains

No Data fetched for Domains

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.4%

TetraMine Data

TTHERM_00463140

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_10735.1	9.997093137033517e-262	hypothetical protein (364 aa)
DictyBase	DDB_G0271100	6.000608367221491e-63	DDB_G0271100 on chromosome: 2 position 47597 to 49269
Oxytricha	Contig12411.0.g65	6.001950283815408e-48	3 exoribonuclease family, doma in 1
SGD	YDR280W	8.003782782428492e-46	RRP45 Exosome non-catalytic co re component; involved in 3-5 RNA processing and degradation in both the nucleus and the c ytoplasm; has similarity to E. coli RNase PH and to human hR rp45p (PM/SCL-75, EXOSC9)
WormBase	WBGene00018154	5.999907735769095e-44	locus:exos-9 status:Confirme d UniProt:Q20128 protein_i d:CCD70741.1
Stentor Coeruleus	SteCoe_9780	1.9287498479639178e-22

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00463140(coding)
ATGTAGGTATTGAGTTAAAATGAGAGCGATTTTGTTCTCTCAGGCTTGGAAAATGAGATT
AGATTAGATGGAAGAAAGTTGATGGATAGCAGAAACATTAAGGTTATTTTTGGAAATAAC
GTAGGAGAAATAGAAGTTTTAATTGGAGACACTCATATAATTACAAAAACAACTGCTGAA
ATCATTTAGCCAAAATAAGAAAAGCCTAATGAAGGCTCTCTTAAATTTAATGTTGATTTA
TCATCTATGCAAGATGAGCAACAACCAAACAATGTTAACATTAAAAAATATTCAAATGAA
ATCTAAAAATTGTTAGAAAAAATAATCAAGGGATCAAAAGCAATCGATATGGAAAGCTTG
TGTATAGTAACAAATAAGAGAGTATGGTCAATTAACGTAGATAGTTCGGTAGTTTCAAAC
GGTGGTAACCTAATTGATGCTATTTACTTATCTGTAATTATTAGTTTACTGCATTTCAGA
AAGCCTTATGTCTCTGTAGAATAGCAATCAAACATTAAAATTCACACTGAAAAAAATCCT
TAACCACTATCTATTCATCATATTCCTATTCCATTTACATTTGCTTTCTTCAAAAAGTCA
ACACTTTTAGTTTCTGATCCACTAGTACTTGAAGAGCAAATCATGGAAGGAAGACTAACT
ATTTCAGTTAATATTTATAATGATGTGTGCAATATTCATAAGCCTGGTGGTGCACCAATC
AAATTAGAATTAATTAATAAGCTTGTTGAAGTTTGCTTGAATAAAATAAAATAAATGACA
GATTTTGTGAGACAAATACTGAAAGAGTGTAATAAGCATAGTATTAACTAAATAAAGGAA
GAAAGCAAAATCATTACATTAAACTTCCCCTAAATAGTTAGTGCATCTCAAACATCTAAT
TAAATTCCATCAAACAAAATGGAGGAAGAGGAAGAGTAATATAAAGTTAGTAAAGAAGAA
ATTAAAAACTTGTTGGAAAGTAGAAATTGA

>TTHERM_00463140(protein)
MQVLSQNESDFVLSGLENEIRLDGRKLMDSRNIKVIFGNNVGEIEVLIGDTHIITKTTAE
IIQPKQEKPNEGSLKFNVDLSSMQDEQQPNNVNIKKYSNEIQKLLEKIIKGSKAIDMESL
CIVTNKRVWSINVDSSVVSNGGNLIDAIYLSVIISLLHFRKPYVSVEQQSNIKIHTEKNP
QPLSIHHIPIPFTFAFFKKSTLLVSDPLVLEEQIMEGRLTISVNIYNDVCNIHKPGGAPI
KLELINKLVEVCLNKIKQMTDFVRQILKECNKHSINQIKEESKIITLNFPQIVSASQTSN
QIPSNKMEEEEEQYKVSKEEIKNLLESRN

>TTHERM_00463140(gene)
ATGTAGGTATTGAGTTAAAATGAGAGCGATTTTGTTCTCTCAGGCTTGGAAAATGAGATT
AGATTAGATGGAAGAAAGTTGATGGATAGCAGAAACATTAAGGTTATTTTTGGAAATAAC
GTAGGAGAAATAGAAGTTTTAATTGGAGACACTCATATAATTACAAAAACAACTGCTGAA
ATCATTTAGCCAAAATAAGAAAAGCCTAATGAAGGCTCTCTTAAATTTAATGTTGATTTA
TCATCTATGCAAGATGAGCAACAACCAAACAATGTTAACATTAAAAAATATTCAAATGAA
ATCTAAAAATTGTTAGAAAAAATAATCAAGGGATCAAAGTAAATAATTAATAAATGATTT
AATTTTTATAAAAGGAACTATTTTAAATTTTAATTGAAATAATTAGAGCAATCGATATGG
AAAGCTTGTGTATAGTAACAAATAAGAGAGTATGGTCAATTAACGTAGATAGTTCGGTAG
TTTCAAACGGTGGTAACCTAATTGATGCTATTTACTTATCTGTAATTATTAGTTTACTGC
ATTTCAGAAAGCCTTATGTCTCTGTAGAATAGCAATCAAACATTAAAATTCACACTGAAA
AAAATCCTTAACCACTATCTATTCATCATATTCCTATTCCATTTACATTTGCTTTCTTCA
AAAAGTCAACACTTTTAGTTTCTGATCCACTAGTAATAAATAAATCAATACATAATTAAT
TCTATTCTAAAAAAGTCATTGAATATTAGTTGTTATCTCAAATAAATTAAAGATATTTTT
TATATTAATTATTTATTCATTTAAATTAATATTCTATTAAGGTACTTGAAGAGCAAATCA
TGGAAGGAAGACTAACTATTTCAGTTAATATTTATAATGATGTGTGCAATATTCATAAGC
CTGGTGGTGCACCAATCAAATTAGAATTAATTAATAAGTAGATGTTTTTATTATTAAATA
TATTATAATGCTAATTATTAATATTTCGAATAGGCTTGTTGAAGTTTGCTTGAATAAAAT
AAAATAAATGACAGATTTTGTGAGACAAATACTGAAAGAGTGTAATAAGCATAGTATTAA
CTAAATAAAGGAAGAAAGCAAAATCATTACATTAAACTTCCCCTAAATAGTTAGTGCATC
TCAAACATCTAATTAAATTCCATCAAACAAAGTAATTTCTTTAAAAAATAATATTTATAT
TATAAATTAACATAAAATAAATAGATGGAGGAAGAGGAAGAGTAATATAAAGTTAGTAAA
GAAGAAATTAAAAACTTGTTGGAAAGTAGAAATTGA