Identifiers and Description
Gene Model Identifier
TTHERM_00691500Standard Name
RRP41 (exosome complex exonuclease RRP41)Aliases
PreTt02988 | 106.m00175 | 3674.m00041Description
RRP41 3-prime exoribonuclease family 1 proteinGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Molecular Function
- RNA binding (IEA) | GO:0003723
- 3'-5'-exoribonuclease activity (IEA) | GO:0000175
Biological Process
- RNA processing (IEA) | GO:0006396
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.6%
TetraMine Data
TTHERM_00691500
WebApollo
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Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_17594.1 9.99955252024689e-165 3 exoribonuclease family, doma
in 1 containing protein (241 a
a)
Oxytricha Contig15304.0.g55 2.998863950472602e-38 3 exoribonuclease family, doma
in 1
WormBase WBGene00007201 9.99893167504554e-35 locus:exos-4.1 Putative exos
ome complex component RRP41
status:Confirmed UniProt:Q17
533 protein_id:CAA97771.3
DictyBase DDB_G0291328 1.0004572433669413e-23 DDB_G0291328 on chromosome: 6
position 128308 to 129151
Stentor Coeruleus SteCoe_12747 2.1151310375910805e-19 SGD YGR195W 2.99851380290819e-19 SKI6 Exosome non-catalytic cor
e component; involved in 3-5 R
NA processing and degradation
in both the nucleus and the cy
toplasm; has similarity to E.
coli RNase PH and to human hRr
p41p (EXOSC4)
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00691500(protein)
MNQDFLVLQEFREDGRKKNELRKVDCILGFDQTVEGSCKLIQGLTEIVCLIKGPHNKSTR
RESEGFLNVQYNVAPFSGTDRRKISKFDKDWNEFTENLRVSFESVILTEQLGSGEIDIIV
SVIQADGSAKSSIFNAISLALMDAGIPMKDFTVSSTVISLNSEILLDATYQEQKKASAEL
IISYLPRSDQVDFMEMKSSKISQQDTKEMCKIAVDGCKQMYQILRTFVLESSVKTLLSTR>TTHERM_00691500(coding)
ATGAATTAAGATTTTTTAGTGTTGTAAGAGTTTAGAGAAGATGGTAGAAAAAAAAATGAG
CTGCGTAAAGTAGATTGCATATTAGGATTTGATTAAACTGTTGAAGGATCTTGTAAATTG
ATTTAAGGATTGACTGAAATAGTTTGCTTGATAAAGGGACCTCATAATAAATCAACTAGA
AGAGAATCAGAAGGATTTTTAAATGTTTAATATAATGTAGCCCCATTCAGTGGAACTGAT
AGAAGAAAAATTTCCAAATTCGATAAGGATTGGAACGAATTCACTGAAAATTTAAGAGTC
AGTTTTGAAAGTGTAATTCTAACAGAGCAATTAGGTTCAGGAGAAATTGATATTATAGTT
TCAGTTATTTAAGCTGATGGTAGTGCCAAAAGCTCAATTTTTAATGCCATTTCCTTAGCT
TTAATGGATGCAGGTATTCCAATGAAGGATTTCACTGTATCTTCAACAGTAATAAGCTTA
AACAGCGAAATTTTATTAGATGCAACATACTAGGAGTAAAAAAAAGCTAGTGCAGAATTG
ATAATATCTTATTTACCAAGAAGTGATTAGGTAGATTTTATGGAAATGAAATCAAGTAAA
ATAAGTTAATAAGATACTAAAGAGATGTGTAAAATTGCGGTTGATGGTTGTAAATAAATG
TATCAAATATTAAGAACTTTCGTTTTGGAAAGCTCAGTAAAAACTCTTTTGAGCACAAGA
TGA>TTHERM_00691500(gene)
ATGAATTAAGATTTTTTAGTGTTGTAAGAGTTTAGAGAAGATGGTAGAAAAAAAAATGAG
CTGCGTAAAGTAGATTGCATATTAGGATTTGATTAAACTGTTGAAGGATCTTGTAAATTG
ATTTAAGGATTGACTGAAATAGTTTGCTTGATAAAGGGACCTCATAATGTATTTATTAAC
ATTATTAAATTTAGTTAAATAAAAATAATTCTATGAAATACAAAAGAAATCAACTAGAAG
AGAATCAGAAGGATTTTTAAATGTTTAATATAATGTAGCCCCATTCAGTGGAACTGATAG
AAGAAAAATTTCCAAATTCGATAAGTAATAAATAGTTTAAACTGCAGATGTTTTATCATT
TATATTATATAATAATGTAGGGATTGGAACGAATTCACTGAAAATTTAAGAGTCAGTTTT
GAAAGTGTAATTCTAACAGAGCAATTAGGTTCAGGAGAAATTGATATTATAGTTTCAGTT
ATTTAAGCTGATGGTAGTGCCAAAAGCTCAATTTTTAATGCCATTTCCTTAGCTTTAATG
GATGCAGGTATGCTTTTTTAATTAATAAACTTTTCTCAAATTTTAATCGAAATATTTGCA
TTAAATAAGGTATTCCAATGAAGGATTTCACTGTATCTTCAACAGTAATAAGCTTAAACA
GCGAAATTTTATTAGGTAAATTATATTCATGAAGTTTTAAAAGTAGTAAATAAAATATAT
AAAAAAGATGCAACATACTAGGAGTAAAAAAAAGCTAGTGCAGAATTGATAATATCTTAT
TTACCAAGAAGTGATTAGGTAGATTTTATGGAAATGAAATCAAGTAAAATAAGTTAATAA
GATACTAAAGAGATGTGTAAAATTGCGGTTGATGGTTGTAAATAAATGTATCAAATATTA
AGAACTTTCGTTTTGGAAAGCTCAGTAAAAACTCTTTTGAGCACAAGATGA