Identifiers and Description
Gene Model Identifier
TTHERM_01050590Standard Name
RRP40 (exosome component RRP40)Aliases
PreTt27802 | 212.m00060Description
RRP40 exosome complex exonuclease RRP40 putative; component of the exosome exonuclease complexGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
No Data fetched for Gene Ontology Annotations
Domains
No Data fetched for Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.8%
TetraMine Data
TTHERM_01050590
WebApollo
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Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_01462.1 1.0001999920370885e-161 hypothetical protein (249 aa)
DictyBase DDB_G0276783 2.998577119979921e-31 DDB_G0276783 on chromosome: 2
position 7291532 to 7292461
Oxytricha Contig20442.0.g90 1.000382677035467e-28 Tht1-like nuclear fusion prote
in
SGD YOL142W 3.0000451088882257e-25 RRP40 Exosome non-catalytic co
re component; involved in 3-5
RNA processing and degradation
in both the nucleus and the c
ytoplasm; predicted to contain
both S1 and KH RNA binding do
mains; has similarity to human
hRrp40p (EXOSC3)
WormBase WBGene00010325 1.9994498063102785e-22 locus:exos-3 status:Confirme
d UniProt:Q93830 protein_i
d:CAB01875.1
Stentor Coeruleus SteCoe_24647 0.0000000000006914400106940203
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_01050590(coding)
ATGGAAATAGAAAAATAGTAATAGCCTGCTTTGAATATAGTTTTACCAGGAGAGTAAATA
GATTTGAGCTAGCTTACAGGATAGCTTTAAATCGATGAAAAATCGTTTACATTGACCACT
GATAATTAATTATACTCAAATAAATCAGGTGTTTTAGTTGATACCTAGCTAAAAGATGGG
TCCTGTGGTTTAACAGTCAAAGCTTACGCTCAAAAATATTATGCAGAAGTTGATGATTAT
GTTATTGGAGTAATTAAGGGTAGAGTATAAGAATATTATTTGGTTGATATTGGAGCTTAA
GAAGATGCATTATTATCTTTTTATGGCTTTGAAGGTGCCACTAAAAAGAATAGACCAAAT
TTAAGAGATGGATCTTTGATATTTTGCAGAGTTACTGAAGCAAATAAATATATGAAAATT
AAAGTTGATTGTATTCATCCTAAAATTAAAAAGTAGTGGATGACTGGAGAATCATTTTTT
GGATAGTTAAAAGACGGTATGGTTTCTAATATCTCAATTGAATATGCAAGGAGTATAATA
GGATAAGGAGACTTCGTATTTAGAGCATTTAAAAAATACATTAAATCTTTTGAGACAGCA
ATAGGTTCAAACGGTAAAGTTTGGATCAAAACACTCTAACCATAAAATACAATTTTGATC
CTTAACGTGCTTAATAAATGTGAGAATATGTCTATCGAATAAATTAAAGTTTATGTTGAT
TAAATCTCTCCTTTGCTTGTAAAAGAATGA>TTHERM_01050590(protein)
MEIEKQQQPALNIVLPGEQIDLSQLTGQLQIDEKSFTLTTDNQLYSNKSGVLVDTQLKDG
SCGLTVKAYAQKYYAEVDDYVIGVIKGRVQEYYLVDIGAQEDALLSFYGFEGATKKNRPN
LRDGSLIFCRVTEANKYMKIKVDCIHPKIKKQWMTGESFFGQLKDGMVSNISIEYARSII
GQGDFVFRAFKKYIKSFETAIGSNGKVWIKTLQPQNTILILNVLNKCENMSIEQIKVYVD
QISPLLVKE>TTHERM_01050590(gene)
ATGGAAATAGAAAAATAGTAATAGCCTGCTTTGAATATAGTTTTACCAGGAGAGTAAATA
GATTTGAGCTAGCTTACAGGATAGCTTTAAATCGATGAAAAATCGTTTACATTGACCACT
GATAATTAATTATACTCAAATAAATCAGGTGTTTTAGTTGATACCTAGCTAAAAGATGGG
TCCTGTGGTTTAACAGTCAAAGCTTACGCTCAAAAATATTATGCAGAAGTTGATGATTAT
GTTATTGGAGTAATTAAGGGTAGAGTATAAGAATATTATTTGGTTGATATTGGAGCTTAA
GAAGATGCATTATTATCTTTTTATGGCTTTGAAGGTGCCACTAAAAAGAATAGACCAAAT
TTAAGAGATGGATCTTTGATATTTTGCAGAGTTACTGAAGCAAATAAATATATGAAAATT
AAAGTTGATTGTATTCATCCTAAAATTAAAAAGTAGTGGATGACTGGAGAATCATTTTTT
GGATAGTTAAAAGACGGTATGGTTTCTAATATCTCAATTGAATATGCAAGGAGTATAATA
GGATAAGGAGACTTCGTATTTAGAGCATTTAAAAAATACATTAAATCTTTTGAGACAGCA
ATAGGTTCAAACGGTAAAGTTTGGATCAAAACACTCTAACCATAAAATACAATTTTGATC
CTTAACGTGCTTAATAAATGTGAGAATATGTCTATCGAATAAATTAAAGTTTATGTTGAT
TAAATCTCTCCTTTGCTTGTAAAAGAATGA