Identifiers and Description

Gene Model Identifier

TTHERM_00301790

Standard Name

RRM9 (RNA recognition motif-containing protein 9)

Aliases

PreTt19375 | 28.m00334 | 3691.m00151

Description

RNA recognition motif-containing protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF01193 ) RNA polymerase Rpb3/Rpb11 dimerisation domain
• ( PF00076 ) RNA recognition motif. (a.k.a. RRM,
• ( TIGR01628 ) polyadenylate binding protein, human types

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.1%

TetraMine Data

TTHERM_00301790

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_07709.1	9.997093137033517e-262	hypothetical protein (419 aa)
DictyBase	DDB_G0279639	0.000000019990673443141236	DDB_G0279639 on chromosome: 3 position 2350407 to 2353794
SGD	YHR015W	0.000030009396760408108	MIP6 Putative RNA-binding prot ein, interacts with Mex67p, wh ich is a component of the nucl ear pore involved in nuclear m RNA export
Oxytricha	Contig4061.0.g90	0.00006000996057121373	RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00301790(coding)
ATGATTCAAGATATTCCTCAAGCTTAAGATTAAACATTAGAAAATGTATTTATTTCAGGA
ATAGATCCCTCTGTTACAGAAAAAGAATTATAAGATTTAATTAGGTTTACAGTAGGATCA
CAACTACAAATTTCGATTAGCAAAATTATAGCTGCAGGATAGGAAAGACTTCTCGGAGAA
GTAAAATGCAAGCTTGAAGAAGCAACTATTCTTCACCACAAGCTCAATAATACTCATCTC
AAGAATTGCTTTCTTAAATTAGTCCCTTAATCTTGCATGAAAAGCATTATTATCCAAAAT
CTTCCTAAAGTATTCAATGAAAAGGACTTATTTAAGATTTTAAACGAACTTACTCCAAAT
TCTTTGAAAAGAATTATTATTGCAGATAATCCAGAAGTTGTTGGAGAAACAGTGGGAGTA
GCTGTAGCAATATATCAAAATTATGAATTGGCATTGAAAGCTATTAAGGCACTCAAGCAA
CAAGGCGAATTATTTAAGTGTAAGATAGATGTATGCTGGAAAGAACCTGATTTCGATATA
ATCAAGGAGCTTTCGATGCAAACAAAAGTTCTTTGTGTTAAGAATATATCTTCATGCACA
GAAACAAGCAAAATAAAAGATGCTTTTTCAGTTTATGGAACAGTAGTTAGAATTTAGAGA
TACTCAACACATGCTTTTGTTGAATTTTTAAATATAGAAAGCGCTAAAAATGCTTTAGCT
GCTTTAAGTGATAAGAGGTTTGAAGGTGGAATAATATGGCATATCTACCCAGCTAAGAAG
TTAGATATTGAAAGACAATACGAAGATGTTGATAAAAACAGAACATTCTCAAAAAATTTT
TTACCTGAAACAGACCAATAAATTTTAAGAAAGTTTTTATTTGACGGATAACTCCCTGCC
CTAGATAGCAAAGTAAGCTAAACTGCATCAAATTTGCTTTAGCACATTAAAAGTATGCAA
TAAAATATGATAAACTCGCTTTAAATCAAGGCAGACACATATAGATAGCTTTAAAATAGC
ATGAATCCTCAGTAAAACAATAACAATAATAATAACAATAATTTGAATAACTTGCCAATT
TAGTAATAAATCCCTGTTTAAAACATGATGAATATGTAAGGGGCAATGAATATGAACTAA
TTCTAAATAAATCCAATCTAAGCAAGCAGTAATAATAATATTAATATGAATATGGGAATG
TAATAATAGTGGGGTATGAACTGA

>TTHERM_00301790(protein)
MIQDIPQAQDQTLENVFISGIDPSVTEKELQDLIRFTVGSQLQISISKIIAAGQERLLGE
VKCKLEEATILHHKLNNTHLKNCFLKLVPQSCMKSIIIQNLPKVFNEKDLFKILNELTPN
SLKRIIIADNPEVVGETVGVAVAIYQNYELALKAIKALKQQGELFKCKIDVCWKEPDFDI
IKELSMQTKVLCVKNISSCTETSKIKDAFSVYGTVVRIQRYSTHAFVEFLNIESAKNALA
ALSDKRFEGGIIWHIYPAKKLDIERQYEDVDKNRTFSKNFLPETDQQILRKFLFDGQLPA
LDSKVSQTASNLLQHIKSMQQNMINSLQIKADTYRQLQNSMNPQQNNNNNNNNNLNNLPI
QQQIPVQNMMNMQGAMNMNQFQINPIQASSNNNINMNMGMQQQWGMN

>TTHERM_00301790(gene)
ATGATTCAAGATATTCCTCAAGCTTAAGATTAAACATTAGAAAATGTATTTATTTCAGGA
ATAGATCCCTCTGTTACAGAAAAAGAATTATAAGGTGGATATTTAATCATAAAAATAAAG
TGAAGCCATAAACATTTTGCTTTTGAATATTTATACATTAAACTTTATTGCTACTTTATG
AAATATTTTTTACATGAGCAACGATAACTAAAAAACCTATTTATTACTTATCCCACATAT
TGCACATTTTAGGAAAATATATATCTTAAAGTTTTTGTGCAGAAGGTTGTGTTATTTTTT
GTTAATATTACCTTATCTCGTAATTTTTTAAAGAAATCAAATTTTAAGTAGCAACTGTTT
TTGTAAATATCAATGCAAATGTTTTTCAGTCATGGCTAATGAATAATATTTAACGAAATA
AATTGAAAATAAAATAGATTTAATTAGGTTTACAGTAGGATCACAACTACAAATTTCGAT
TAGCAAAATTATAGCTGCAGGATAGGAAAGACTTCTCGGAGAAGTAAAATGCAAGCTTGA
AGAAGCAACTATTCTTCACCACAAGCTCAATAATACTCATCTCAAGAATTGCTTTCTTAA
ATTAGTCCCTTAATCTTGCATGAAAAGCATTATTATCCAAAATCTTCCTAAAGTATTCAA
TGAAAAGGACTTATTTAAGATTTTAAACGAACTTACTCCAAATTCTTTGAAAAGAATTAT
TATTGCAGATAATCCAGAAGTTGTTGGGTATGGAATTTTTTAAGCACAATTTATTAACCT
TAATATTAACTTGGTATTATTTTAATAATATGTAAAGAGAAACAGTGGGAGTAGCTGTAG
CAATATATCAAAATTATGAATTGGCATTGAAAGCTATTAAGGCACTCAAGCAACAAGGCG
AATTATTTAAGTGTAAGATAGATGTATGCTGGAAAGAACCTGATTTCGATATAATCAAGG
AGCTTTCGATGCAAACAAAAGTTCTTTGTGTTAAGAATATATCTTCATGCACAGAAACAA
GCAAAATAAAAGATGCTTTTTCAGTTTATGGAACAGTAGTTAGAATTTAGAGATACTCAA
CACATGCTTTTGTTGAATTTTTAAATATAGAAAGCGCTAAAAATGCTTTAGCTGCTTTAA
GTGATAAGAGGTTTGAAGGTGGAATAATATGGCATATCTACCCAGCTAAGAAGTTAGATA
TTGAAAGGTAAAATAAATATATTTTCATTTATTTATTTAAAAATTTACTTTTCTACTTTA
GAGAAATATGAATTTAAATTAATTAAAATATATTTTTTAATAAAGACAATACGAAGATGT
TGATAAAAACAGAACATTCTCAAAAAATTTTTTACCTGAAACAGACCAATAAATTTTAAG
AAAGTTTTTATTTGACGGATAACTCCCTGCCCTAGATAGCAAAGTAAGCTAAACTGCATC
AAATTTGCTTTAGCACATTAAAAGTATGCAATAAAATATGATAAACTCGCTTTAAATCAA
GGCAGACACATATAGATAGCTTTAAAATAGCATGAATCCTCAGTAAAACAATAACAATAA
TAATAACAATAATTTGAATAACTTGCCAATTTAGTAATAAATCCCTGTTTAAAACATGAT
GAATATGTAAGGGGCAATGAATATGAACTAATTCTAAATAAATCCAATCTAAGCAAGCAG
TAATAATAATATTAATATGAATATGGGAATGTAATAATAGTGGGGTATGAACTGA