Identifiers and Description
Gene Model Identifier
TTHERM_00649100Standard Name
RRM62 (RNA recognition motif-containing protein 62)Aliases
PreTt09224 | 94.m00142 | 3677.m00050Description
RRM62 U2 snRNP auxiliary factor small subunitGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Molecular Function
- zinc ion binding (IEA) | GO:0008270
- nucleic acid binding (IEA) | GO:0003676
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 12.8%
TetraMine Data
TTHERM_00649100
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_17866.1 9.997316819378982e-180 zinc finger protein (330 aa)
Oxytricha Contig706.0.g82 1.0003926095686843e-81 Zinc finger C-x8-C-x5-C-x3-H t
ype (and similar)
DictyBase DDB_G0285077 9.997652352281279e-57 u2af1 on chromosome: 4 positio
n 2799520 to 2801698
WormBase WBGene00006698 8.000462645699572e-47 locus:uaf-2 status:Confirmed
UniProt:Q9U2U0 protein_id
:CAB55137.1
Stentor Coeruleus SteCoe_33425 2.4426007377405277e-36
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00649100(coding)
ATGTTTGATTTTTTATTTGTTTGTTTCTTTGAGAGGGGAAAGAAAAAAGAGAAAAGAGAA
AAATATTAATATAATTATTTAATAATCAAAGAAAAGTAAAGAGAAAAGACTTAAATCTTA
GAAAAGCGGTAGAAAAAGGAAGTCTATAGACAATATCTAAATAAACTAAGTTAAGGTATA
AATTTTAGTTAGCTAGCTTATTAGTAAAGGAAAGCAAAGAAAGCAAGTAAGGTAGTAAAA
GTTAGTTAGTAGTAGAAGTAGTAAGGTTAATAGTAAAAGTAAGTAAATAAGTAAGTTTAA
GTTTTAGAAATGGCTGAGAAATTAAGTCGTATGTATGGTACAGAAGAAGACAAGGTCAAT
TGTCCCTTCTACTTTAAAATTGGTGCTTGCAGATATGAAAATAAATGTCTCAGAATCCAC
AACAGACCCTCTGAGAGTTAGACTATCTTGATTAAGCACATGTACTAGAACTCCCCCACT
GAGTTGGCTTTGGCTTAGGGTAATAGAGTCAGCGAAGAAGAAGCTTAGAAGGCTTTGAAT
CACTACGAAGAATTTTATGAGGAAGTCTTTTTGGAGTTAGCAAGTTACGGAGAAATTGAT
GACTTGATCATTTGTGATAACATCGGTGATCACATGAAAGGAAACGTTTACGTTAAATAT
GTTAGGGAAAGCGAAGCTCTTAAGTGCTTGATGTCCTTAAAGACTCGTTATTACGACAAG
CAACAGCTCCAACCTGAATTCTCTCCCGTTACTGATTTCTCTAATGCAAAATGCAAACAA
TATATTGAAGGTCAGTGCAAAAGAAGTGGATACTGTAATTACATTCACTCTAAGCCTATC
GGTAGACCATTCAGAAGATCCCTTTTCAGATAAATGTACGAAGAGCATCCTGAATACAAG
AACAGGTCTCGCTCTCGCTCTAGATCAGATGATGATGAGAGATCTAAAAAGAAAAGAAAG
GATAAGGAAAGATCTGAAAAACATGAAAAAGACTCCAAAAAGAAGCATTCTCGTTCCAGA
AGCTCCCATAAAAAGCACAAGAAAGATAAAGATAAAAAGAAGAAGAAGTCTAGATCTCAC
TCCAAGCATTCTAAGTCAGCTTCTCCTGGCTACAAAAACTCTGAAGAAAGAAGAGCTGAT
ATCGCAAAGTGGGGCGAGGAAGATGATGAAGAAGACATGAAAGTCAATGCAAGCGGTTCA
GTCAACAATAATGGAACCACCAGCAATAACGAATAAAGCGACAGCAATAACAAGCAAGGC
ACTCACGATTATTTAGCCTAGCTTGTTAAGCCATAGAATTGA>TTHERM_00649100(protein)
MFDFLFVCFFERGKKKEKREKYQYNYLIIKEKQREKTQILEKRQKKEVYRQYLNKLSQGI
NFSQLAYQQRKAKKASKVVKVSQQQKQQGQQQKQVNKQVQVLEMAEKLSRMYGTEEDKVN
CPFYFKIGACRYENKCLRIHNRPSESQTILIKHMYQNSPTELALAQGNRVSEEEAQKALN
HYEEFYEEVFLELASYGEIDDLIICDNIGDHMKGNVYVKYVRESEALKCLMSLKTRYYDK
QQLQPEFSPVTDFSNAKCKQYIEGQCKRSGYCNYIHSKPIGRPFRRSLFRQMYEEHPEYK
NRSRSRSRSDDDERSKKKRKDKERSEKHEKDSKKKHSRSRSSHKKHKKDKDKKKKKSRSH
SKHSKSASPGYKNSEERRADIAKWGEEDDEEDMKVNASGSVNNNGTTSNNEQSDSNNKQG
THDYLAQLVKPQN>TTHERM_00649100(gene)
ATGTTTGATTTTTTATTTGTTTGTTTCTTTGAGAGGGGAAAGAAAAAAGAGAAAAGAGAA
AAATATTAATATAATTATTTAATAATCAAAGAAAAGTAAAGAGAAAAGACTTAAATCTTA
GAAAAGCGGTAGAAAAAGGAAGTCTATAGACAATATCTAAATAAACTAAGTTAAGGTATA
AATTTTAGTTAGCTAGCTTATTAGTAAAGGAAAGCAAAGAAAGCAAGTAAGGTAGTAAAA
GTTAGTTAGTAGTAGAAGTAGTAAGGTTAATAGTAAAAGTAAGTAAATAAGTAAGTTTAA
GTTTTAGAAATGGCTGAGAAATTAAGTCGTATGTATGGTACAGAAGAAGACAAGGTCAAT
TGTCCCTTCTACTTTAAAATTGGTGCTTGCAGATATGAAAATAAATGTCTCAGAATCCAC
AACAGACCCTCTGAGAGTTAGACTATCTTGATTAAGCACATGTACTAGAACTCCCCCACT
GAGTTGGCTTTGGCTTAGGGTAATAGAGTCAGCGAAGAAGAAGCTTAGAAGGCTTTGAAT
CACTACGAAGAATTTTATGAGGAAGTCTTTTTGGAGTTAGCAAGTTACGGAGAAATTGAT
GACTTGATCATTTGTGATAACATCGGTGATCACATGAAAGGAAACGTTTACGTTAAATAT
GTTAGGGAAAGCGAAGCTCTTAAGTGCTTGATGTCCTTAAAGACTCGTTATTACGACAAG
CAACAGCTCCAACCTGAATTCTCTCCCGTTACTGATTTCTCTAATGCAAAATGCAAACAA
TATATTGAAGGTCAGTGCAAAAGAAGTGGATACTGTAATTACATTCACTCTAAGCCTATC
GGTAGACCATTCAGAAGATCCCTTTTCAGATAAATGTACGAAGAGCATCCTGAATACAAG
AACAGGTCTCGCTCTCGCTCTAGATCAGATGATGATGAGAGATCTAAAAAGAAAAGAAAG
GATAAGGAAAGATCTGAAAAACATGAAAAAGACTCCAAAAAGAAGCATTCTCGTTCCAGA
AGCTCCCATAAAAAGCACAAGAAAGATAAAGATAAAAAGAAGAAGAAGTCTAGATCTCAC
TCCAAGCATTCTAAGTCAGCTTCTCCTGGCTACAAAAACTCTGAAGAAAGAAGAGCTGAT
ATCGCAAAGTGGGGCGAGGAAGATGATGAAGAAGACATGAAAGTCAATGCAAGCGGTTCA
GTCAACAATAATGGAACCACCAGCAATAACGAATAAAGCGACAGCAATAACAAGCAAGGC
ACTCACGATTATTTAGCCTAGCTTGTTAAGCCATAGAATTGA