Identifiers and Description

Gene Model Identifier

TTHERM_00248430

Standard Name

RRM6 (RNA recognition motif-containing protein 6)

Aliases

PreTt02539 | 21.m00370

Description

RNA recognition motif-containing protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF00076 ) RNA recognition motif. (a.k.a. RRM,

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.5%

TetraMine Data

TTHERM_00248430

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_00458.1	7.001881202137212e-149	hypothetical protein (289 aa)
Oxytricha	Contig18844.0.g103	7.000028900755185e-46	RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)
SGD	YNL110C	3.001003044337619e-17	NOP15 Constituent of 66S pre-r ibosomal particles, involved i n 60S ribosomal subunit biogen esis; localizes to both nucleo lus and cytoplasm
WormBase	WBGene00011408	9.997764199084386e-16	status:Confirmed UniProt:Q22 135 protein_id:CAA84724.1
DictyBase	DDB_G0294559	0.0000000000019997478866288316	DDB_G0294559 on chromosome: 4 position 1421546 to 1422592
Stentor Coeruleus	SteCoe_31228	0.000000000013887943864964021

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00248430(coding)
ATGGGAAAACAATTAGATAAGAAGAAGCCTGCTGTTTAGAATAAGGATAAAAAAGAAAAG
AAGACCATGAAGTAACAAAAAAAACATAAGAAGGATGAAAAATAAGTTAAGGATTCTCAA
ATTAAGATCGGTCCTACCAAGAAGATTGCAAAATTAACTAAAGAAGCTGTCATTAAGAAA
GATGGTGAAAAAAAAAGCAAAGATGAAAAGAAGCCCGTCTCCACTGAACCTCTCGTTCAA
TTAAGAGATAACGTTAAAGATTCATTAGCTTTCGTCAAGAAGAAATAGGTCGATTAAAAC
GCTTTGAAGAAGGCTGTCAAGAGATTAGAAGATAAAGCTAATAGAGTTCCTATTAAAGAT
ACTCCATAAAATTGCACAATCTACGTAGGTCACTTGCCTTATGGTTTGCTTGAAGAATAA
TTAAAGACTTATTTTGAACAATATGGTACCATCGTTAATATTAAAGTTGCTAGAAGTAGA
AAGACTGCCAGATCTAAAGGTTTTGCCTTCATTTAATTTGAACAACCAGAAGTTGCTGCT
ATTGCTGCAAAGGCTATGAATGGTCATATGGTTTTAGGTAAAGTTTTAGAAGTCCATGTC
TTGCAACAAGACTAAAAGAACCCCTTCAGCTTTAAATATGGAAAGAAATAATTCAAGTTC
ATTAACTGGAAACGTATCTTCATTAAATAAAAGAATTCAGAAAAAGATCCTGAAGAAGTT
AAAAAGGGAGTAGAAAAATTACTTAAAAACGAAGAAAAGAAAAGAGACAACTTGAAGAAG
CTTGGAATAGATTATGAATTCCCAGGATTCAAAGCAATCGTTGATGGTAAAACTGTCATT
GAAGCTGACGATTGA

>TTHERM_00248430(protein)
MGKQLDKKKPAVQNKDKKEKKTMKQQKKHKKDEKQVKDSQIKIGPTKKIAKLTKEAVIKK
DGEKKSKDEKKPVSTEPLVQLRDNVKDSLAFVKKKQVDQNALKKAVKRLEDKANRVPIKD
TPQNCTIYVGHLPYGLLEEQLKTYFEQYGTIVNIKVARSRKTARSKGFAFIQFEQPEVAA
IAAKAMNGHMVLGKVLEVHVLQQDQKNPFSFKYGKKQFKFINWKRIFIKQKNSEKDPEEV
KKGVEKLLKNEEKKRDNLKKLGIDYEFPGFKAIVDGKTVIEADD

>TTHERM_00248430(gene)
ATGGGAAAACAATTAGATAAGAAGAAGCCTGCTGTTTAGAATAAGGATAAAAAAGAAAAG
AAGACCATGAAGTAACAAAAAAAACATAAGAAGGATGAAAAATAAGTTAAGGATTCTCAA
ATTAAGATCGGTCCTACCAAGAAGATTGCAAAATTAACTAAAGAAGCTGTCATTAAGAAA
GATGGTGAAAAAAAAAGCAAAGATGAAAAGAAGCCCGTCTCCACTGAACCTCTCGTTCAA
TTAAGAGATAACGTTAAAGATTCATTAGCTTTCGTCAAGAAGAAATAGGTCGATTAAAAC
GCTTTGAAGAAGGCTGTCAAGAGATTAGAAGATAAAGCTAATAGAGTTCCTATTAAAGAT
ACTCCATAAGTAATTAAACACATTACAATCAATATATATTGATCAAGTCCAGTTAAATTT
TTAGATCAATAACAATATTTTTTCATATTTGTTTATAAAACCATTTTTTTAAATTATTAA
CAGAATTGCACAATCTACGTAGGTCACTTGCCTTATGGTTTGCTTGAAGAATAATTAAAG
ACTTATTTTGAACAATATGGTACCATCGTTAATATTAAAGTTGCTAGAAGTAGAAAGGTT
AGCATAAAATTATTTGTTTAATTTCCTATTTTTTTATTTTAAGTACAAAAAACACATAAT
AATCATAATATTTATCCACTGCCTTTCCAATAATTTAGATATTATCTATTAATAAGTAGA
AATTAGCAGCTTTATTCCAGTTTTCTACTTAAAAACATTAATGTTATCTTCGATTTCTTT
TATTGTTCTTTTTTGTAGAATTTAGCTTCAATAGCAAAAATAATAATAGCTAAATTTTGG
AATTATTTGTTTCAAAATTATTTAGAAAATTTTTAATAATTTTATTTAAAATATTTATTT
AAATATAACATAGACTGCCAGATCTAAAGGTTTTGCCTTCATTTAATTTGAACAACCAGA
AGTTGCTGCTATTGCTGCAAAGGCTATGAATGGTCATATGGTTTTAGGTAAAGTTTTAGA
AGTCCATGTCTTGCAACAAGACTAAAAGAACCCCTTCAGCTTTAAATATGGAAAGAAATA
ATTCAAGTTCATTAACTGGAAACGTATCTTCATTAAATAAAAGAATTCAGTAAATATTTT
CACAACAAGCAATTATTCAATAATTATTTTGGATTTTTTTAAACTTTTACATTTTTATTT
AACTTGTAGGAAAAAGATCCTGAAGAAGTTAAAAAGGGAGTAGAAAAATTACTTAAAAAC
GAAGAAAAGAAAAGAGACAACTTGAAGAAGCTTGGAATAGATTATGAATTCCCAGGATTC
GTAATAAAATATAAATTAAAACAAATTATTAATTTTATTTTTTATTAATAGAAAGCAATC
GTTGATGGTAAAACTGTCATTGAAGCTGACGATTGA