Identifiers and Description

Gene Model Identifier

TTHERM_00295340

Standard Name

RRM59 (RNA recognition motif-containing protein 59)

Aliases

PreTt15644 | 27.m00304 | 3692.m00107

Description

RRM59 polyadenylate-binding protein; polyadenylate-binding protein 2

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF00658 ) Poly-adenylate binding protein, unique domain
• ( PF00076 ) RNA recognition motif. (a.k.a. RRM,
• ( TIGR01628 ) polyadenylate binding protein, human types

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 12.9%

TetraMine Data

TTHERM_00295340

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_08800.1	9.997093137033517e-262	polyadenylate-binding protein 2 (610 aa)
Oxytricha	Contig21044.0.g17	0.0000000000000299873730555305	RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)
WormBase	WBGene00003903	0.00000000000009996062864481225	locus:pab-2 status:Confirmed UniProt:Q19579 protein_id :CAA90444.1
SGD	YER165W	0.00000000019994075865167896	PAB1 Poly(A) binding protein, part of the 3-end RNA-processi ng complex, mediates interacti ons between the 5 cap structur e and the 3 mRNA poly(A) tail, involved in control of poly(A ) tail length, interacts with translation factor eIF-4G
DictyBase	DDB_G0293558	0.0000000010002658722841845	pabpc1A on chromosome: 6 posit ion 3041877 to 3044187

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00295340(coding)
ATGTTATAAACCGCCACTTAAAATTAGAGCACACTTTTAGTCCAATTGCTCCACGAAGGT
GTCACCAAGGAACTTATTTTCAAGGAGTTCAAGAAATTCGGTACTATCAAGTCATTGAAG
CACTTCCCTAAGAACAAAAGCGCCTTAGTTGAATTCTAATCTCCTGAAGAAGCAAAGAAT
GCTAAGCAATCCCTCAATCACAATAAGCTTTTGAACAAGGAAATTAATATTGTTAATTAC
CAAAACAAGGATGAACTTAAGCAAAAGAAAAAGTATAACTTATTCATTCACAATGTTCCT
TAAGATCTCGAAACTAACACTTTACACAATTTCATGTCTAAGTATGGTGAAATTACCTCT
CTTATGCTTAAGAAGAACGATGAAAACAAGAATTTAGGTTATGGTTACGTTTAATTCGAA
ACTGAAGAAGCCTACAATGAAATTTTGAAAGAACACGAGTTAAACGGTAAGATTTCTCTT
CCTAACTCTACCATCTCTTTCAATATCTAAAAGTTCAACGATAGCAACAAAAATAAGGCC
AACAACATCGTCATTCTTGGTTTATTCGAAAACGAAATCCCAGCTGATTAAAAGGAAGCC
AAGACCTAATCAATCAACGCCATTTTCGAGAAAATTAAGTAAGAACTCAATGTTCTTCAT
TTCAATTTCTACACTGAATACAATGAAAGCAAGAAGAACTTCTGGGTCAAGGTTGATTTC
CAATACGATGATGATAAGCAAGAAGAACACATTTATAAGACTGTTAAGGAATAAGTTTAA
AAGAATTTCTCTTACTCAGGAGCCTAAAACAAGGGACCTACCATTAACTTCAAGTCTAAT
GAAAGCAGTGAAAGAAATCTTTTCTTCTTAGGTGTCAAGATTGACATTAAGGAATAAGAC
ATTGCTGATTGGATTCAAAAGGCTATTGGTGTTTCTGTTCCTACTGAGAGCATTAAAATT
AAAAAGAGAACTAAACCCGCCAATGCTGACGATCAATTAAAAACTAACAATGTTTCAGTT
TTCTTTGATTCTTAGGCTGACGGTCAAAAGTTGATGATTTTCTGTGCTAAATAATCTAAT
AAAAACTCTGTTGATGAAATCTTCGACAACAGACACAAGGTCACTCTTTATCTCAAAAAG
AATGAACAAGAAAGTGTCTAAAAGTTGACTAAAAAAATTGGTGAATTCCAACAAAATAGC
ACTATGGGTAGCAACAAATTCTAAACTGACATTTAAGCTCCTAACCCAATTCACCCCTAT
GGATACCCTATTCCTATGTTCATGCCCCAATAAATCCCCTTCTAAAATTAATAACCAAAG
CTTATTAACATTCCTTCTATGTAACATAATAAGAAGATTTAAAACACTCCTTAACCAATT
GAACCTAAACCTCAAACTCTTATTGCTGTTCCTAATAAACCTGCTGCTCCTCAAAATATT
TTTATTTAGTTCGAAAAGGCTACTGCAGAAGAAAAGAAGAATAAAATTGAACAAATTACT
AATGCCATTTCAACTTAATTCAGCGATTTCGATAAGCTTCAAGATGAATCAAAGAGAAGT
ATTCTTGGTCAAATCATTTACTATAAAATTTCTGAACTTGATCTTGACAAGAATAGAAAA
ATCATGGAATATATCCCTGATGTTTAAAACGAAAACCAAGCTAGAGCTAAAATCGCTGAA
TTCAAACAACAAGTCCCCAAAATTACTGGTATGCTTATCGATACTGACGTCTTCGAAGTT
GCTGATATCGTCGACATCGTTAAAGACGAAAAGGAACTTATTGAAAGATGCAGTGAAGCT
ATCGATCTTATTATTAGTCAAAAGAAATGA

>TTHERM_00295340(protein)
MLQTATQNQSTLLVQLLHEGVTKELIFKEFKKFGTIKSLKHFPKNKSALVEFQSPEEAKN
AKQSLNHNKLLNKEINIVNYQNKDELKQKKKYNLFIHNVPQDLETNTLHNFMSKYGEITS
LMLKKNDENKNLGYGYVQFETEEAYNEILKEHELNGKISLPNSTISFNIQKFNDSNKNKA
NNIVILGLFENEIPADQKEAKTQSINAIFEKIKQELNVLHFNFYTEYNESKKNFWVKVDF
QYDDDKQEEHIYKTVKEQVQKNFSYSGAQNKGPTINFKSNESSERNLFFLGVKIDIKEQD
IADWIQKAIGVSVPTESIKIKKRTKPANADDQLKTNNVSVFFDSQADGQKLMIFCAKQSN
KNSVDEIFDNRHKVTLYLKKNEQESVQKLTKKIGEFQQNSTMGSNKFQTDIQAPNPIHPY
GYPIPMFMPQQIPFQNQQPKLINIPSMQHNKKIQNTPQPIEPKPQTLIAVPNKPAAPQNI
FIQFEKATAEEKKNKIEQITNAISTQFSDFDKLQDESKRSILGQIIYYKISELDLDKNRK
IMEYIPDVQNENQARAKIAEFKQQVPKITGMLIDTDVFEVADIVDIVKDEKELIERCSEA
IDLIISQKK

>TTHERM_00295340(gene)
ATGTTATAAACCGCCACTTAAAATTAGAGCACACTTTTAGTCCAATTGCTCCACGAAGGT
GTCACCAAGGAACTTATTTTCAAGGAGTTCAAGAAATTCGGTACTATCAAGTCATTGAAG
CACTTCCCTAAGAACAAAAGCGCCTTAGTTGAATTCTAATCTCCTGAAGAAGCAAAGAAT
GCTAAGCAATCCCTCAATCACAATAAGCTTTTGAACAAGGAAATTAATATTGTTAATTAC
CAAAACAAGGATGAACTTAAGCAAAAGAAAAAGTATAACTTATTCATTCACAATGTTCCT
TAAGATCTCGAAACTAACACTTTACACAATTTCATGTCTAAGTATGGTGAAATTACCTCT
CTTATGCTTAAGAAGAACGATGAAAACAAGAATTTAGGTTATGGTTACGTTTAATTCGAA
ACTGAAGAAGCCTACAATGAAATTTTGAAAGAACACGAGTTAAACGGTAAGATTTCTCTT
CCTAACTCTACCATCTCTTTCAATATCTAAAAGTTCAACGATAGCAACAAAAATAAGGCC
AACAACATCGTCATTCTTGGTTTATTCGAAAACGAAATCCCAGCTGATTAAAAGGAAGCC
AAGACCTAATCAATCAACGCCATTTTCGAGAAAATTAAGTAAGAACTCAATGTTCTTCAT
TTCAATTTCTACACTGAATACAATGAAAGCAAGAAGAACTTCTGGGTCAAGGTTGATTTC
CAATACGATGATGATAAGCAAGAAGAACACATTTATAAGACTGTTAAGGAATAAGTTTAA
AAGAATTTCTCTTACTCAGGAGCCTAAAACAAGGGACCTACCATTAACTTCAAGTCTAAT
GAAAGCAGTGAAAGAAATCTTTTCTTCTTAGGTGTCAAGATTGACATTAAGGAATAAGAC
ATTGCTGATTGGATTCAAAAGGCTATTGGTGTTTCTGTTCCTACTGAGAGCATTAAAATT
AAAAAGAGAACTAAACCCGCCAATGCTGACGATCAATTAAAAACTAACAATGTTTCAGTT
TTCTTTGATTCTTAGGCTGACGGTCAAAAGTTGATGATTTTCTGTGCTAAATAATCTAAT
AAAAACTCTGTTGATGAAATCTTCGACAACAGACACAAGGTCACTCTTTATCTCAAAAAG
AATGAACAAGAAAGTGTCTAAAAGTTGACTAAAAAAATTGGTGAATTCCAACAAAATAGC
ACTATGGGTAGCAACAAATTCTAAACTGACATTTAAGCTCCTAACCCAATTCACCCCTAT
GGATACCCTATTCCTATGTTCATGCCCCAATAAATCCCCTTCTAAAATTAATAACCAAAG
CTTATTAACATTCCTTCTATGTAACATAATAAGAAGATTTAAAACACTCCTTAACCAATT
GAACCTAAACCTCAAACTCTTATTGCTGTTCCTAATAAACCTGCTGCTCCTCAAAATATT
TTTATTTAGTTCGAAAAGGCTACTGCAGAAGAAAAGAAGAATAAAATTGAACAAATTACT
AATGCCATTTCAACTTAATTCAGCGATTTCGATAAGCTTCAAGATGAATCAAAGAGAAGT
ATTCTTGGTCAAATCATTTACTATAAAATTTCTGAACTTGATCTTGACAAGAATAGAAAA
ATCATGGAATATATCCCTGATGTTTAAAACGAAAACCAAGCTAGAGCTAAAATCGCTGAA
TTCAAACAACAAGTCCCCAAAATTACTGGTATGCTTATCGATACTGACGTCTTCGAAGTT
GCTGATATCGTCGACATCGTTAAAGACGAAAAGGAACTTATTGAAAGATGCAGTGAAGCT
ATCGATCTTATTATTAGTCAAAAGAAATGA