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Identifiers and Description
Gene Model Identifier
TTHERM_00857880Standard Name
RRM58 (RNA recognition motif-containing protein 58)Aliases
PreTt09052 | 152.m00072Description
RRM58 polyadenylate-binding protein; polyadenylate-binding proteinGenome Browser (Macronucleus)
Genome Browser (Micronucleus)
Gene Ontology Annotations
No Data fetched for Gene Ontology Annotations
Domains
Gene Expression Profile
- Tetrahymena Functional Genomics Database:
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.2%
TetraMine Data
TTHERM_00857880
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_07184.1 1.9998745702418095e-48 hypothetical protein (1214 aa)
Oxytricha Contig1956.0.g14 2.0004286606204839e-16 RNA recognition motif_ (a_k_a_
RRM, RBD, or RNP domain)
WormBase WBGene00004701 0.0000000029989608248573072 locus:rsp-4 Probable splicin
g factor, arginine/serine-rich
4 status:Confirmed UniPro
t:Q09511 protein_id:CCD68735
.1
SGD YGR159C 0.0000008998839737394744 NSR1 Nucleolar protein that bi
nds nuclear localization seque
nces, required for pre-rRNA pr
ocessing and ribosome biogenes
is
DictyBase DDB_G0277353 0.000004000864880866421 DDB_G0277353 on chromosome: 2
position 7808700 to 7811174
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00857880(coding)
ATGTTTGTAGAAAGTGAAGTTTTTACTGAAAATACTTAATCAAACTCACAATTTATAGCA
AATAATTTCTAGTAAATGGTGAAAGATGAATCTAAAATTAGCAATATAAAAGATACTTAT
GTAAAAGAAAATGATATAAACTCATCAAGAATTAACGCTGATGAAGATAATAGATAATAG
TCTATGTCTTCTAAATTCTCCAATCGCAATACATCTGCTTCTTCAAGAAGATAATCTTCT
TAAGTAAGCGCTCCTAGGTCTTCTAGATCTTCTTCTTCTGGATCTTCCTGCTCTTCCTCA
TCATCATAATCTTCTTCATCATCATAAAGGTCTCGATCATCTTCTTCATCTTCCTCCTAA
ACATATCGCACATCAAAAATGAGTAAAAGCTCAAAGATTTAGGATAAAAGAGCAACTAGA
AATGAAAATGAGTCTTAAAATAGCAAATGCTTGTACATAGCGAATTTAAGTGAGAAAGTG
ACTGAATCAAATTTAAAGAAACTTTTTGAAGAGTATGGAGAAATAGATTATGTAAATATA
TGCTATAAACCTTACAGTTAGTAATAACAGGGTATTAAAATACCTGCTGGATATGCCTTT
ATAAAATATTACAAGGAGAAAGATGCTTAAAGAGCATTAAATCACCTCGATGAAACAAAT
TTAAAAGGAAAAAAAATAAAAATTGAATATGCAAAAAGAGAGAAGCCCAGATAGTCAAAG
GATGGACCATACCATAAAATTGGAAATGTTTATAATAAAAAATAATCAGATAATTAAACA
GAGTTAAATAAATGTGATAAGATGAGTAAAAAGGATGTTCAATATTTTTCGAATTATAAC
CCTTCTGAATAAAATAAGTATAAAAGTCAAAGGCACTACATAAAGGATAAATAATCATCC
CAAAATTTATTAAAGAAAACTAATTCTGAATTTGTTGATAATAGATAGAACCTGACGATG
GATTAATAAGATTGCTTTGCAAATTAAGATTCCTACAGAAATAACTAAAAAGCAAACACA
TAAGTTAAATCTAGAAGCCGCAGCAGAAGCAGAACTTTAAGTGATAAAGTTATTTTGATT
ATGGACTTCATGATATCTAAAAGCGATAATAAGAACTAACATTAAACAATCGATTAGCAT
ACTGCTACTGTTAAAGAAGAAGATCAAAAAGTGCTTGATGAAGCCACTCTCTAGCATATT
ATGAATAAAAATGCAAATTAATAATAAATAAGCTCAATTTATGAAAATCAATCTAAAAAT
ATACGCCAAAAAACTGTTTATTCTGAAAAAAGGTAGATGGATTAGGTTAACAAAGGAAGC
TGTCTCTATATTTCGAATTTAAGCCATAAAGTGACTGATTAGCAGCTAAAGAAGATCTTT
AGCACATATGGAAGAGTTGAATATGCAAATATTTGTTACGAGCCATATAGTTAGCAGTAA
AGAGGATAAAAAATCCCTAGAGGAATAGGATTTGTCAAATACGCTAGGAATTCAGATGCT
TTGAAAGCGATTGAAGAGCTTGATGGAAAAATGATAAAAAATAAAGAAATTAAAATAATG
CTTTCTAAAAGAGATGAGCCAAGAGTTTCGCACAAAGGACCCTACTTTGGCAAAAGCCCT
AAAAAAGATAAAAAAGACTCAGATAGCAAGAAAGAATCAAAAAGGATTTAAAAGTAATCT
TCTTATTAATCCCAAACTTCAGAAGAAAATAATTCGATTGAAAGACATAGATCTATTAGC
AGGGAATCATCTGAGTCTAATGGGGATTTGACTTTCTAATAAAAATAAAAAAACTAAGCT
AAAACACATTAAGGAATAATAGATTAAGAATAATTGAATCTGAAAAATAAACAAAAGCAT
CAAAGCGATAGTTAAAATATATTATATAATGGTAGATCTACTCGCCATTAAAATAATAAA
TAAAAAAATTAAAATGATGAAAAGGACGATTAACGCATCCATGAAGAGCTAAATAAATAG
GTTAACCACTTCCAAACTTCAATATAAAATGAAAAATAAATGAATGTGTAAAATAGATCT
AGATCAAGATCTAATGAAAACTACAAAGAAAAGTAGTATAAATCAAACCAAAAGTAAACA
AGGTATAATCGTTTTAAATAGCACGGATAAAGATCTTCATCTACTTCTAACAACACATCA
TAATCCTCTTCTTCTTCGCATTCATCGTCATCATCATCTTCTTCTCCCTCATCATAACAA
TCTAGTCCTAGTTCTTCACCTTCTTAATTTTCTCGTAAAAAAAAAAAGTAGAGTGTAAGA
AAGTATAAAAATGATCAATCTTCTTAAAACAATAACAAAAGATCCAAAAAAAACTCAAAA
CAATATCGATAAAGGTCTTCATCATCTTCTTCATAATCTAACAACTCTACCTAATAATAA
AATAAAAATTCAATTAGAATAAGAAATTGA>TTHERM_00857880(protein)
MFVESEVFTENTQSNSQFIANNFQQMVKDESKISNIKDTYVKENDINSSRINADEDNRQQ
SMSSKFSNRNTSASSRRQSSQVSAPRSSRSSSSGSSCSSSSSQSSSSSQRSRSSSSSSSQ
TYRTSKMSKSSKIQDKRATRNENESQNSKCLYIANLSEKVTESNLKKLFEEYGEIDYVNI
CYKPYSQQQQGIKIPAGYAFIKYYKEKDAQRALNHLDETNLKGKKIKIEYAKREKPRQSK
DGPYHKIGNVYNKKQSDNQTELNKCDKMSKKDVQYFSNYNPSEQNKYKSQRHYIKDKQSS
QNLLKKTNSEFVDNRQNLTMDQQDCFANQDSYRNNQKANTQVKSRSRSRSRTLSDKVILI
MDFMISKSDNKNQHQTIDQHTATVKEEDQKVLDEATLQHIMNKNANQQQISSIYENQSKN
IRQKTVYSEKRQMDQVNKGSCLYISNLSHKVTDQQLKKIFSTYGRVEYANICYEPYSQQQ
RGQKIPRGIGFVKYARNSDALKAIEELDGKMIKNKEIKIMLSKRDEPRVSHKGPYFGKSP
KKDKKDSDSKKESKRIQKQSSYQSQTSEENNSIERHRSISRESSESNGDLTFQQKQKNQA
KTHQGIIDQEQLNLKNKQKHQSDSQNILYNGRSTRHQNNKQKNQNDEKDDQRIHEELNKQ
VNHFQTSIQNEKQMNVQNRSRSRSNENYKEKQYKSNQKQTRYNRFKQHGQRSSSTSNNTS
QSSSSSHSSSSSSSSPSSQQSSPSSSPSQFSRKKKKQSVRKYKNDQSSQNNNKRSKKNSK
QYRQRSSSSSSQSNNSTQQQNKNSIRIRN>TTHERM_00857880(gene)
ATGTTTGTAGAAAGTGAAGTTTTTACTGAAAATACTTAATCAAACTCACAATTTATAGCA
AATAATTTCTAGTAAATGGTGAAAGATGAATCTAAAATTAGCAATATAAAAGATACTTAT
GTAAAAGAAAATGATATAAACTCATCAAGAATTAACGCTGATGAAGATAATAGATAATAG
TCTATGTCTTCTAAATTCTCCAATCGCAATACATCTGCTTCTTCAAGAAGATAATCTTCT
TAAGTAAGCGCTCCTAGGTCTTCTAGATCTTCTTCTTCTGGATCTTCCTGCTCTTCCTCA
TCATCATAATCTTCTTCATCATCATAAAGGTCTCGATCATCTTCTTCATCTTCCTCCTAA
ACATATCGCACATCAAAAATGAGTAAAAGCTCAAAGATTTAGGATAAAAGAGCAACTAGA
AATGAAAATGAGTCTTAAAATAGTATAAATTTATTAAATTTAGTTTGATTATGCTATTAA
AAATCCATTAAAAATATCATCAAAAATATTCTCAAAAAGGCAAATGCTTGTACATAGCGA
ATTTAAGTGAGAAAGTGACTGAATCAAATTTAAAGAAACTTTTTGAAGAGTATGGAGAAA
TAGATTATGTAAATATATGCTATAAACCTTACAGTTAGTAATAACAGGGTATTAAAATAC
CTGCTGGATATGCCTTTATAAAATATTACAAGGAGAAAGATGCTTAAAGAGCATTAAATC
ACCTCGATGAAACAAATTTAAAAGGAAAAAAAATAAAAATTGAATATGCAAAAAGAGAGA
AGCCCAGATAGTCAAAGGATGGACCATACCATAAAATTGGAAATGTTTATAATAAAAAAT
AATCGTAAGAATATTAATTAAATATTTAATTTTAAAATAATTTATTATTGAACCAGTTAA
AAAAGGAAAAGAAGTTAATCATTAGAGCATATTAAAGATAAATTTTCTTAGAAAAATAAA
TATATTAGAGATAATTAAACAGAGTTAAATAAATGTGATAAGATGAGTAAAAAGGATGTT
CAATATTTTTCGAATTATAACCCTTCTGAATAAAATAAGTATAAAAGTCAAAGGCACTAC
ATAAAGGATAAATAATCATCCCAAAATTTATTAAAGAAAACTAATTCTGAATTTGTTGAT
AATAGATAGAACCTGACGATGGATTAATAAGATTGCTTTGCAAATTAAGATTCCTACAGA
AATAACTAAAAAGCAAACACATAAGTTAAATCTAGAAGCCGCAGCAGAAGCAGAAGTAAT
TCTATGAGGAATAAATACTCGTGAGAGCATAAAACTATTATAACATATTTTGTTTATTTT
ACTAATTTAAAAACAATATTCTACCTTTTTGTAAATGAAATTTTAAGAATGTCCTATTTT
AATAGCAGTAAAAGCATATTAAATAATCTTCACAAACAAAAACCCTCTTCTATCAAAGAA
AGATTGATAATTAATTAATTATAAAAACTAGAAATTATTTAGTCTTAAAACAATGTTTTC
TTGAGAAAAAAATTATAAATCTTAGGTGTAAAAAGACTTAAATAAAAATAAAATATTGAT
CTCCCATTTTTTTATTAAATTTATTAAAAAATTTACTAATTTACTCTATTTTATTTATCT
GGGACTCTATTTATTGCAGCTAGCTAGCTGAAAATTTAAATAATTTTGATCATAGATTAT
AAAGACTGATTTTGTAAATTAAATGAATTAGATTGATTATTAAAAACTTATATAGCTATG
ATGAAATATAAAATTTTTTAAATGACGAAAATTACGTGTAAAAAATATTATATTTTTTTG
AGTAATAATTGAAACATAATACATTTTTTTCAATTTTATAAATAGATCAATGAAAAAACA
CAGTTGTTAATGTGAAAAAGTCTAGTTTTGAATTTCAGGTAATTTAATAGAAGAATGTAT
TAAAATAGTTATTTAGTTTGTAAAAAATAGTTATTCTATTTTGAGACTTGTAAGCCTCAT
GCTATATTTATGAAGGAAAGGATATATGAAGCAAAAGAAAAATCTAAATAAATAAATACG
CATAAATTATAAGATTAATCAAAAAGGCAAGAAAAATAACATTTACTCTCAAACAAAGTC
TTTTAGCTAATAAAAAGATAATAATGTGCAAAAAAAAGTGATATTCTTTAATTATATTGC
ATATTTTATTAAAAGAATTAGAAGAACAAAATTTTTATAGCAGCTGGAGCTAATTCAAAT
TTTAGCTTTAAGTGATAAAGTTATTTTGATTATGGACTTCATGATATCTAAAAGCGATAA
TAAGAACTAACATTGTAAAATCATTTTTATAAATTCATTTTAGACTTTTATATTATTTGT
TGTTTCAAATTTAGAACAGCACTAATTTTGCAAGATAATTTAAAATTATCAATTTGTGCC
TTTAAAAAAGAAAAGTAGAAAGACGGAAATACTTTAATTTAAGCTTTGCCTATTAGATTT
CTCTTAAATTTTTTTTATATAAATAAGAAACAATCGATTAGCATACTGCTACTGTTAAAG
AAGAAGATCAAAAAGTGCTTGATGAAGCCACTCTCTAGCATATTATGAATAAAAATGCAA
ATTAATAATAAATAAGCTCAATTTATGAAAATCAATCTAAAAATATACGCCAAAAAACTG
TTTATTCTGAAAAAAGGTAGATGGATTAGGTTAACAAAGGTAGATTTCTTACAAATTTTC
ATATAAATTACCTTAAATTTACTCATAATTGCTTAATAATTAACAGGAAGCTGTCTCTAT
ATTTCGAATTTAAGCCATAAAGTGACTGATTAGCAGCTAAAGAAGATCTTTAGCACATAT
GGAAGAGTTGAATATGCAAATATTTGTTACGAGCCATATAGTTAGCAGTAAAGAGGATAA
AAAATCCCTAGAGGAATAGGATTTGTCAAATACGCTAGGAATTCAGATGCTTTGAAAGCG
ATTGAAGAGCTTGATGGAAAAATGATAAAAAATAAAGAAATTAAAATAATGCTTTCTAAA
AGAGATGAGCCAAGAGTTTCGCACAAAGGACCCTACTTTGGCAAAAGCCCTAAAAAGTAT
TAAATTTTTTCAATTAATTAAATAAATAAAATAAAAATAAGGTTAAATCATTGTTAAAAT
ATCATAGTTTAAAATAATTTTAAAATTAAAATAATACTTATAAAATTGTTTGAAATAATA
AAAAAACAAATATCTTATGACAAACCAAGCAAAAAATAATAATTCGCCAAAGTATTATAT
TTGTTTTGTTAAATGATTACTTCAATAATTATTAAGAAAATTAATTAATTTTTTTTAAAG
TCAAATAATGAACAAAAAATTAATTAAAAAATTTGAAAATAAATAAAAGAAAGCAAAAAT
CATCTTCTTTTGTTAGTTTTTCTTTAAAATTCACTATAATTAATTTAATTAACTAACTTG
TTATCAAAGCGCATTCTTTCTTTTTATAAACCAAAACTATAGCTTGATATTATTTTTAAT
ATTACTAATTTTAATTAAGAGATAAAAAAGACTCAGATAGCAAGAAAGAATCAAAAAGGA
TTTAAAAGTAATCTTCTTATTAATCCCAAACTTCAGAAGAAAATAATTCGATTGAAAGAC
ATAGATCTATTAGCAGGGAATCATCTGAGTCTAATGGGGATTTGACTTTCTAATAAAAAT
AAAAAAACTAAGCTAAAACACATTAAGGAATAATAGATTAAGAATAATTGAATCTGAAAA
ATAAACAAAAGCATCAAAGCGATAGTTAAAATATATTATATAATGGTAGATCTACTCGCC
ATTAAAATAATAAATAAAAAAATTAAAATGATGAAAAGGACGATTAACGCATCCATGAAG
AGCTAAATAAATAGGTTAACCACTTCCAAACTTCAATATAAAATGAAAAATAAATGAATG
TGTAAAATAGATCTAGATCAAGATCTAATGAAAACTACAAAGAAAAGTAGTATAAATCAA
ACCAAAAGTAAACAAGGTATAATCGTTTTAAATAGCACGGATAAAGATCTTCATCTACTT
CTAACAACACATCATAATCCTCTTCTTCTTCGCATTCATCGTCATCATCATCTTCTTCTC
CCTCATCATAACAATCTAGTCCTAGTTCTTCACCTTCTTAATTTTCTCGTAAAAAAAAAA
AGTAGAGTGTAAGAAAGTATAAAAATGATCAATCTTCTTAAAACAATAACAAAAGATCCA
AAAAAAACTCAAAACAATATCGATAAAGGTCTTCATCATCTTCTTCATAATCTAACAACT
CTACCTAATAATAAAATAAAAATTCAATTAGAATAAGAAATTGA
