Identifiers and Description

Gene Model Identifier

TTHERM_00691350

Standard Name

RRM57 (RNA recognition motif-containing protein 57)

Aliases

PreTt02973 | 106.m00113 | 3674.m00026

Description

polyadenylate-binding protein 2

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF00076 ) RNA recognition motif. (a.k.a. RRM,

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 11.2%

TetraMine Data

TTHERM_00691350

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_08800.1	9.997329401607134e-86	polyadenylate-binding protein 2 (610 aa)
WormBase	WBGene00003902	0.00000000000020009182674645818	locus:pab-1 status:Confirmed UniProt:Q9U302 protein_id :CAA21572.1
Oxytricha	Contig21044.0.g17	0.00000000000020009182674645818	RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)
SGD	YER165W	0.00000000002000577768187062	PAB1 Poly(A) binding protein, part of the 3-end RNA-processi ng complex, mediates interacti ons between the 5 cap structur e and the 3 mRNA poly(A) tail, involved in control of poly(A ) tail length, interacts with translation factor eIF-4G
DictyBase	DDB_G0290745	0.0000000010002658722841845	pabpc1B on chromosome: 5 posit ion 4494408 to 4497035

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00691350(coding)
ATGTAGAAAAACTCCTCATAAAATTAGAGTACTACTCTTTTTATCCAATCACTCCATTAG
GATGTTACCAAGAATTTACTTTTCAAGTAGTTCAAGAAATTTGGTACTATCGAGTCATTG
AAGCACTTCCCTAAGAACAGAACAGCCTTAGTTGAATTCTAAACTCCTGAAGAAGCACAG
AATGCTAAGTAAAGCCTCAATTACATAAAGCTTCTTGGCAAGGAAATTAATATTATTAAT
TACTAAACTAAGGATGAACTTGAGCAAAAGAAAGATTATAACTTATTAATTCAAAATGTT
CCTTTAGATCTTGAAACCATTACTTTACACAATTTTATGACTAAGTATGGTGAAATAAGC
TCTCTATTACTTAAGAAGGACTAATTAAACTAGAATTTAGGTGATGGTTTTATTCAATTC
GAAACTAAAGAAGCATGCGATAAAATTTTGAAAGAACATGAGTAAAATGGTAAGATTTCT
CTTCCTAACTCTAATATCTCTTTCAATATCTAAAAAAACAACTAAATCAAGTAAAAAAAT
ACAAAAATCATGATTTATGGTTTATTCGAGCATGAAATCGCAGCTGATTAAAAGGAATCC
AAGACTTAATCAATCAATGCCATTTTCGAAGAAATTAAGAAAGACCTTTAAGTTGATTTT
AATTTCTATACTGAATACAACGAAAAAAAGAAGAATTTCTGGGCCAAGGTTGATTTTACA
TACGATGATGATTAGCAAAAAGAAGAGATTTGTAAGATTATTATAGAATAAGTTCAAAAG
AATTTCCATTACTCAGGAGATTAAAGCAAGGGACCTAAGATTGTTAGTTGA

>TTHERM_00691350(protein)
MQKNSSQNQSTTLFIQSLHQDVTKNLLFKQFKKFGTIESLKHFPKNRTALVEFQTPEEAQ
NAKQSLNYIKLLGKEINIINYQTKDELEQKKDYNLLIQNVPLDLETITLHNFMTKYGEIS
SLLLKKDQLNQNLGDGFIQFETKEACDKILKEHEQNGKISLPNSNISFNIQKNNQIKQKN
TKIMIYGLFEHEIAADQKESKTQSINAIFEEIKKDLQVDFNFYTEYNEKKKNFWAKVDFT
YDDDQQKEEICKIIIEQVQKNFHYSGDQSKGPKIVS

>TTHERM_00691350(gene)
ATGTAGAAAAACTCCTCATAAAATTAGAGTACTACTCTTTTTATCCAATCACTCCATTAG
GATGTTACCAAGAATTTACTTTTCAAGTAGTTCAAGAAATTTGGTACTATCGAGTCATTG
AAGCACTTCCCTAAGAACAGAACAGCCTTAGTTGAATTCTAAACTCCTGAAGAAGCACAG
AATGCTAAGTAAAGCCTCAATTACATAAAGCTTCTTGGCAAGGAAATTAATATTATTAAT
TACTAAACTAAGGATGAACTTGAGCAAAAGAAAGATTATAACTTATTAATTCAAAATGTT
CCTTTAGATCTTGAAACCATTACTTTACACAATTTTATGACTAAGTATGGTGAAATAAGC
TCTCTATTACTTAAGAAGGACTAATTAAACTAGAATTTAGGTGATGGTTTTATTCAATTC
GAAACTAAAGAAGCATGCGATAAAATTTTGAAAGAACATGAGTAAAATGGTAAGATTTCT
CTTCCTAACTCTAATATCTCTTTCAATATCTAAAAAAACAACTAAATCAAGTAAAAAAAT
ACAAAAATCATGATTTATGGTTTATTCGAGCATGAAATCGCAGCTGATTAAAAGGAATCC
AAGACTTAATCAATCAATGCCATTTTCGAAGAAATTAAGAAAGACCTTTAAGTTGATTTT
AATTTCTATACTGAATACAACGAAAAAAAGAAGAATTTCTGGGCCAAGGTTGATTTTACA
TACGATGATGATTAGCAAAAAGAAGAGATTTGTAAGATTATTATAGAATAAGTTCAAAAG
AATTTCCATTACTCAGGAGATTAAAGCAAGGGACCTAAGATTGTTAGTTGA