Identifiers and Description

Gene Model Identifier

TTHERM_01099050

Standard Name

RRM53 (RNA recognition motif-containing protein 53)

Aliases

PreTt20575 | 232.m00042

Description

polyadenylate-binding protein, putative

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF08777 ) RNA binding motif
• ( PF00076 ) RNA recognition motif. (a.k.a. RRM,

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.5%

TetraMine Data

TTHERM_01099050

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_19377.1	2.0004261429631518e-110	hypothetical protein (275 aa)
SGD	YER165W	0.00000000002000577768187062	PAB1 Poly(A) binding protein, part of the 3-end RNA-processi ng complex, mediates interacti ons between the 5 cap structur e and the 3 mRNA poly(A) tail, involved in control of poly(A ) tail length, interacts with translation factor eIF-4G
Oxytricha	Contig11357.0.g94	0.000000009996807949091551	RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)
WormBase	WBGene00003903	0.0000007997233352734267	locus:pab-2 status:Confirmed UniProt:Q19581 protein_id :CAA90446.2

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_01099050(coding)
ATGGCTGACAAGGAAGAAATCACTTTAGATGCTTATGCTAAGAAGCAAAAATTCTAAGAA
GGTGGCAATAAAAAGAAGGAAAACGGCAAAGGAGGAAAAGGTAGAATTGAAAAGAAATTG
AACGGAGTAAAATCTGTCAAAGGTGCTATCCGTCGTACTGGTCGCTAAGATAACAATCGC
TCTGGAGGGAAACCTCGTTAAAACTCCTCAAATAATTCAAACAAATAGAGGAGCATCAGC
AGACCTGTTAAGGAATCTAGACCTGCTAAGATCAAAACTGTTCGCCCTATTCCTGAACAC
AAAAAAAGAATCGTCAAAGTTTACAACTTAGTTCCTAATATTAACAACGAAGAATTCTAT
AACCTCTTTGTCAAATATGGAAGTATCGAGTAATCAAAGATCGAAACTGATAAGAAAGGA
AAGTCTGAAGAAAAGGGTTATGTTGTTTACAGAGATAACGATGCTGCTAAGCGTGCTATT
GATGACTTGAATGGTGTCGAATTAGAAGGTAGAATAATTACAGTTGAATTCATGAAGGAC
GGTGACAAACTCCCTGATAGACAAAATAACAATGCTAGCAGTGGAGAAAGAGAAAGAAGA
AACTCCGATAGCCATAATAGCCAAGGTGTATAAAAGAAGAGAATCTTTAAGGATAAGGAT
AACAGAAGAGATAGCAGAAGAGATAGAGATAGAAACAGTAACAATGGCAACAAAAGAAGA
GATTTCGATAGAAATAGAAGAAATAACGGTTCTCACAATAATAATGGAAACAGAAATAGA
AACAATAACAGAAATAATAACAATAACAGAAATAACAATAGAAATAACAGAAAATACAGC
AAATGA

>TTHERM_01099050(protein)
MADKEEITLDAYAKKQKFQEGGNKKKENGKGGKGRIEKKLNGVKSVKGAIRRTGRQDNNR
SGGKPRQNSSNNSNKQRSISRPVKESRPAKIKTVRPIPEHKKRIVKVYNLVPNINNEEFY
NLFVKYGSIEQSKIETDKKGKSEEKGYVVYRDNDAAKRAIDDLNGVELEGRIITVEFMKD
GDKLPDRQNNNASSGERERRNSDSHNSQGVQKKRIFKDKDNRRDSRRDRDRNSNNGNKRR
DFDRNRRNNGSHNNNGNRNRNNNRNNNNNRNNNRNNRKYSK

>TTHERM_01099050(gene)
ATGGCTGACAAGGAAGAAATCACTTTAGATGCTTATGCTAAGAAGCAAAAATTCTAAGAA
GGTGGCAATAAAAAGAAGGAAAACGGCAAAGGAGGAAAAGGTAGAATTGAAAAGAAATTG
AACGGAGTAAAATCTGTCAAAGGTGCTATCCGTCGTACTGGTCGCTAAGATAACAATCGC
TCTGGAGGGGTATATTCTATAATAAACAATAATTAAATTACTCGATGAATAAATCTGCTA
AAACGATTAAGATATTTTGCCTATTCAAAACAATTACTAACTATCTAAGGAGCTAAAATC
GGCAAGCTAGATTAGAAGGCATGAGGAGGAAAAAATATTTTCATCGTTTAGTTATTCTTC
TATTTCTATCATTTTTCAAAAAAAGGGGGATACTTAGTATTAAATAAAAGTTTTCCTTTT
TTAGAAAAATGCTGTTTAATGATTGATATTGATGATTGATAAGGAGAGTAAAAACAGTCT
AGGTCATTCATTAATATTCCTTTTCAAAAGAAAAAAATTCTTTTAATACTTAAAAGCAGA
AATAAAATGATTTGATTCTGCTAGACAGTCTTTACTATATTAGTAAAAAGCAAAATAAAA
AAGCCAAGTGCATGAAAAAAATAATATTCCAAAATGAACTTTTCCTAAATTTAATTGCCA
GATTGGCACATTTTCCCCCACTATACAATCACCAACACACACACTCAAATCTCATAAATC
CCCCATAAAAATCCCTTTTAAATAGTTGATTTTATTTGAATTTTATCTTTGGTTAAGAGA
AACAGTATTGTTTGTTGATTAGGCATGGTGATTGCCTAATCCTAATATTATACGACGTAT
AATTTATTTGTATGGGCAAAAACTTTATAAAAAGAATGAGTTATTGGTGTCGTGATGTTA
AATGAATGAATTTTTTAAATTCTATCAATTTTTATTTTAAAAGACTTGGACAAAGTCTAA
ATTTCAATTTCTACCTCCTGCGATTGTTTCTTTCTTAATAAGATAATCGAGAATTCAAAT
AAAAAATGTTTGTTAATCCTTTTTGATAATCTGTGGCTTTCTATTTTTTTGAGCTATAAA
ACCCTATCATTCATACTTAGCACTATTCTCATATTATCATTCATATGTTCAAAAGTTTCT
GATCACATAAGAAATTAGTAAAGACAAGATTATCTTTCAAATTTTAAGTAAAAACAACTT
ATCTAGACATAAAAATAATAAATTTTTGAAAACAGAAATTAAAAATAGCTATTTTATTTA
AAAATCTTATAAGCACAAATAAGATCAGAGTTATGTAAAAAACAAACATAAAAATTTAAA
GCAAAATAATTTATGATAAAATCAATTCTAGGATTTAACATTCAAAAGATAAATTATGAT
ATTAAAATGAATTATAACTAATGAAATCAGATATCTATAAAGCTGAATCTATCTATATTT
GATAAAATACTTAAGATTTAGTTAAATATTCTCCTGTAAACATTAAAATTTTATTTTCCA
TTAAATAAATAGCTATAAAGTATTAACTTCCTATCAAACTAGATATTATAAATAAATATG
CGTTAGTATAATTCTAAATAAGAAGTAAGGCATATCTATCTATCCTTTATCACATCAAAT
CATTATCAATCATTATTTTTGTTTAAATCTAGAAGAAAACTAATTTAAATTAGAAAAAAT
TTGGTTAAGCAATTAGCGTGTATCACCAATAATTAATATTACATAGAAATAATTAGAAGT
TTAGAAACAGATTTATTCATGTTATATGAATGGTTAATTAATATTTTAAAAAATATTATT
TTTATTAGAAACCTCGTTAAAACTCCTCAAATAATTCAAACAAATAGAGGAGCATCAGCA
GACCTGTTAAGGAATCTAGACCTGCTAAGATCAAAACTGTTCGCCCTATTCCTGAACACA
AAAAAAGAATCGTCAAAGTTTACAACTTAGTTCCTAATATTAACAACGAAGAATTCTATG
TAAAATTTTTAAGCTGCCTTATTTCAAAAAGTTTATCTTTGTTCTAAATAAAATAAGAAC
CTCTTTGTCAAATATGGAAGTATCGAGTAATCAAAGATCGAAACTGATAAGAAAGGAAAG
TCTGAAGAAAAGGGTTATGTTGTTTACAGAGATAACGATGCTGCTAAGCGTGCTATTGAT
GACTTGAATGGTAACTTATATAATTTAAATCTCAAAAAGCAAACAATTCATTTAATTAGC
TTCAATAATAACTTTTCTTTTTGTAATACTCTAAGGTGTCGAATTAGAAGGTAGAATAAT
TACAGTTGAATTCATGAAGGACGGTGACAAACTCCCTGATAGACAAAATAACAATGCTAG
CAGTGGAGAAAGAGAAAGAAGAAACTCCGATAGCCATAATAGCCAAGGTGTATAAAAGAA
GAGAATCTTTAAGGATAAGGATAACAGAAGAGATAGGTAATTTATTACAAAAGCATTCAT
AAACTGATTGCTCATCACATATAATTTAAAAAAATAAACAGCAGAAGAGATAGAGATAGA
AACAGTAACAATGGCAACAAAAGAAGAGATTTCGATAGAAATAGAAGAAATAACGGTTCT
CACAATAATAATGGAAACAGAAATAGAAACAATAACAGAAATAATAACAATAACAGAAAT
AACAATAGAAATAACAGAAAATACAGCAAATGA