Identifiers and Description
Gene Model Identifier
TTHERM_00898250Standard Name
RRM52 (RNA recognition motif-containing protein 52)Aliases
PreTt20530 | 160.m00066Description
RRM52 RNA recognition motif 1 in vertebrate serine/arginine-rich splicing factor; RNA binding proteinGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
No Data fetched for Gene Ontology Annotations
Domains
- ( PF00076 ) RNA recognition motif. (a.k.a. RRM,
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 11.2%
TetraMine Data
TTHERM_00898250
WebApollo
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Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_41364.1 1.0004671766404936e-76 RNA binding protein (119 aa)
Oxytricha Contig11357.0.g94 2.9994376937714457e-52 RNA recognition motif_ (a_k_a_
RRM, RBD, or RNP domain)
WormBase WBGene00016808 5.997418848378574e-45 Pre-mRNA branch site p14-like
protein status:Confirmed U
niProt:Q8ITY4 protein_id:CCD
65337.1
DictyBase DDB_G0286297 2.0008536325002377e-42 DDB_G0286297 on chromosome: 4
position 4322636 to 4323120
Stentor Coeruleus SteCoe_17406 2.8625185805493937e-20 SGD YGL044C 0.0000000006000548789370351 RNA15 Cleavage and polyadenyla
tion factor I (CF I) component
involved in cleavage and poly
adenylation of mRNA 3 ends; in
teracts with the A-rich polyad
enylation signal in complex wi
th Rna14p and Hrp1p; mutant di
splays reduced transcription e
longation in the G-less-based
run-on (GLRO) assay; required
for gene looping
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00898250(coding)
ATGAGCAATAAGATTGTTAAGTTACCCCCTGAGGTTAATAGAGTAGTTTATGTTAGAAAT
CTACCATATAAAATATCAGCAGAAGAATTATATGATGTTTTTGGAACTTATGGTCCAATT
AGATAAATAAGAAAGGGAGTTAGTGGTGATAAAAAAGGAACAGCATTTGTAGTTTATGAA
GATATTTTTGATGCAAAGACTGCAGTTGAACATTTAAATGGTTTTAATGTTGCAGGCAGA
TATTTAATTGTTTTATATTATCAACCTCATAAAATCAACAAAAAGACTGATTTACAAAAG
AAATAAGAAGAAGTTGATCGTTTAAAAGAAATAGCAAGCAAATAAACTTAATAGTGA>TTHERM_00898250(protein)
MSNKIVKLPPEVNRVVYVRNLPYKISAEELYDVFGTYGPIRQIRKGVSGDKKGTAFVVYE
DIFDAKTAVEHLNGFNVAGRYLIVLYYQPHKINKKTDLQKKQEEVDRLKEIASKQTQQ>TTHERM_00898250(gene)
ATGAGCAATAAGATTGTAAATATTAGCATTAAAAAACCAATTTTATATTCTAAAATATTT
TAATTCAAATAGGTTAAGTTACCCCCTGAGGTTAATAGAGTAGTTTATGTTAGAAATCTA
CCATATAAAATATCAGCAGAAGAATTATATGATGTTTTTGGAACTTATGGTCCAATTAGA
TAAATAAGAAAGTAAATAAATTATTTTTATTCAAATTGAAAATAGCTAATTATTTTATCA
ATATTCAATAGGGGAGTTAGTGGTGATAAAAAAGGAACAGCATTTGTAGTTTATGAAGAT
ATTTTTGATGCAAAGACTGCAGTTGAACATTTAAATGGTTTTAATGTTGCAGGCAGATAT
TTAATTGTTTTATATTATCAACCTCATAAAATCAACAAAAAGACTGATTTACAAAAGAAA
TAAGAAGAAGTTGATCGTTTAAAAGAAATAGCAAGCAAATAAACTTAATAGTGA