Identifiers and Description
Gene Model Identifier
TTHERM_01050580Standard Name
RRM50 (RNA recognition motif-containing protein 50)Aliases
PreTt27801 | 212.m00059Description
RRM50 hypothetical proteinGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
No Data fetched for Gene Ontology Annotations
Domains
- ( TIGR01612 ) rhoptry protein
- ( PF00515 ) tetratricopeptide repeat
- ( PF07719 ) tetratricopeptide repeat
- ( TIGR00864 ) polycystin cation channel protein
- ( TIGR01563 ) phage head-tail adaptor, putative
- ( TIGR00741 ) ribosomal subunit interface protein
- ( PF00076 ) RNA recognition motif. (a.k.a. RRM,
- ( TIGR01642 ) U2 snRNP auxilliary factor, large
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10%
TetraMine Data
TTHERM_01050580
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_01463.1 9.997093137033517e-262 hypothetical protein (754 aa)
Oxytricha Contig655.1.g20 0.000009999254677478949 RNA recognition motif (a_k_a_
RRM, RBD, or RNP domain)
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_01050580(coding)
ATGCAACTAAAGTAGTCTTAAAAGGAGTAGATTAGAAATATCATCAATTCTAAGCTTTCC
AATAGCAAGAGAGGAGATGAAATATCCTCTTAAGTTGAAGATAAGGTCATAGATTTGATT
GAGAGATAGAATTTCTAAAGCAAAGATAGTCTCCAAGATAAATTGTAAGGAGAATTAAAG
GACATTTTAAAAGAAAACGCTCATCATATTAGTGAATCAGTTTCTAAGGTAATTTATAGC
AGCAACTATGATAATAGTGGCAACTCTGCCTAAAAAGATGACGATTATGAACAAAATTTA
TACAAGAACAAATTCTACTCAGACCATTCGGATAATTCTGATGATGAAGACGACGATGAT
GATGATAGAAGAGACAAGAGAAAGAGAAATTTTAAGAAAAGACTTAGCATTTAGCAATCT
GATATATAAAGCGATAACGAAAATAAAAGTTTGAGAAGCGACTCAGAAGGAAGAGAAGGA
AATAAAAGGGTTAGCAGAAAAGATAGCTATGCTAGTAATCATAGTGGGAAGAGAGATTAA
AATAAGGATGAAAAAGACTCTCATTATAATTCAAAATAAAACTATAACTAGAACAATGGA
AAATACCAAAACAATAAATACAACAATAATAATAGTAGGTTTAAAAATGATAAAAAAAAT
TTAAATAACAATGGAAACAATAAAAGATTAAGTAATGGACCAGCAGCTCCTTTACCAACT
TTCATGAGTATGAATAATGGAGGAATCATTCCAAATTTACTTACTAATAATCCTATGATG
AATTATCCCATGCCTAATAGTCTAAATTTAATGCAACCTTTTAGCGGTATATTCAATCCA
AGAGTAGGTCCTCCTGCACCTCCTACAGGAAAACCAGTCATCTCTTAAGCTGGTACTGGT
GCTCCTTCTATAACTCTATCAAAATCTAAAAATATTATTTATGTCTTTTACATACCACCT
AAATTGAATAATGTTACTAAAATTAGTTAGTATTTCACAAATAAATTTGGAGCTGTTTCA
GCTTATGACAAAATTGATGAAACCACTGCTTCAATAAAATTTGAAAAAGAAGAATCTGCT
TAAAAGGCAGTAGATTCAAAAGAAAAGCCATTCAGAATAGAATAAATTGTTGTAACTTTT
ACTAGAAGCCCAGCTCCTCCCAAACCAGCATTTGTGAACAAAGGCAATAATTAAAACAAT
AATTAAAATGGTGGAAAATCCACCTTGCATAGGAAGCCTAGCATCGATGGATCAGAACCT
GCCAAATAAAAATTCATAAAAAATGAAAACAACAACAGTACCACTTTTAACAACAACAAC
AACAATAATAATAATAGCAACATCAACAACTAAAAACCTAAGCTAGCAATTAATTTTGAG
CAGAAGAAAAAGCAAAAGCAATTTGATGAACAAAAAAGATTAATTTAACTAAAATTTGCA
GATAAGCTTAAAGTGATGATATTCATAAAAAAAAGGGAATAAAATCCTGAAAGCGAAATC
CGTTAAGAAGTTCAAAAATCTATTGATTAAATTAAATAAGTCAAAGATGTACTATCAAAA
GTATAAACTCAAGAAGATCTTTAATAAGTAGAATAGCATGAATTAATCGTTGAAAATCAA
TATGAATTTGCTCAAAAAATACGTTTCTTAGAAGGAAAAGACATGAGTTTGACTGAGTTA
CGTCCTAAGTTACTTGAATATGGAAAAGTAGAAACTTTGAAGCCTCACATTATGGAAAAA
GCTGTTGATATATGTTTTAGCGATTTTGAATCATCAGAAAAAGCATACTTTGGATTACAA
GGACAATATAATATAGAGTTCATTCATTAGCATATTGTTAAATTTTTAAAAAATCCTTTC
TAACCTTAGGATGAAGCTTAAGAAGAATAAGAAGAAGGAGGAAATTAGTTAGATCAAAAT
ATTGAATACTAAGAAGATGAATAATAGGGAGATTAAATTTAACAAGATTAAGCAAACGAA
AATTAAGAATAGTAATACCAATACGATGAAAATAATGAGGAATACTATGAAAACTAAGAA
TAAGCTTAGGAGGGAGAAGAATACTAAGAGAATATTGCTGAATAAGATGAATAGCAATAA
TAATACTAAGAATTATAAGATAATTAGCAAATTCAAGAGGAGGACCAATAAGTTGATGAT
GATCTTTGA>TTHERM_01050580(protein)
MQLKQSQKEQIRNIINSKLSNSKRGDEISSQVEDKVIDLIERQNFQSKDSLQDKLQGELK
DILKENAHHISESVSKVIYSSNYDNSGNSAQKDDDYEQNLYKNKFYSDHSDNSDDEDDDD
DDRRDKRKRNFKKRLSIQQSDIQSDNENKSLRSDSEGREGNKRVSRKDSYASNHSGKRDQ
NKDEKDSHYNSKQNYNQNNGKYQNNKYNNNNSRFKNDKKNLNNNGNNKRLSNGPAAPLPT
FMSMNNGGIIPNLLTNNPMMNYPMPNSLNLMQPFSGIFNPRVGPPAPPTGKPVISQAGTG
APSITLSKSKNIIYVFYIPPKLNNVTKISQYFTNKFGAVSAYDKIDETTASIKFEKEESA
QKAVDSKEKPFRIEQIVVTFTRSPAPPKPAFVNKGNNQNNNQNGGKSTLHRKPSIDGSEP
AKQKFIKNENNNSTTFNNNNNNNNNSNINNQKPKLAINFEQKKKQKQFDEQKRLIQLKFA
DKLKVMIFIKKREQNPESEIRQEVQKSIDQIKQVKDVLSKVQTQEDLQQVEQHELIVENQ
YEFAQKIRFLEGKDMSLTELRPKLLEYGKVETLKPHIMEKAVDICFSDFESSEKAYFGLQ
GQYNIEFIHQHIVKFLKNPFQPQDEAQEEQEEGGNQLDQNIEYQEDEQQGDQIQQDQANE
NQEQQYQYDENNEEYYENQEQAQEGEEYQENIAEQDEQQQQYQELQDNQQIQEEDQQVDD
DL>TTHERM_01050580(gene)
ATGCAACTAAAGTAGTCTTAAAAGGAGTAGATTAGAAATATCATCAATTCTAAGCTTTCC
AATAGCAAGTATAAAAAATTGTTTTCAAACATTCCTCTAAATTTAGTTTATTATTAAAAA
GGAGAGGAGATGAAATATCCTCTTAAGTTGAAGATAAGGTCATAGATTTGATTGAGAGAT
AGAATTTCTAAAGCAAAGATAGTCTCCAAGATAAATTGTAAGGAGAATTAAAGGACATTT
TAAAAGAAAGTAATAAGAAAAATTTGATTTTTTGAAAAATAAATTGTTTAGCTTGTGAAA
ATTTAATTTTTTACCTGTTTAACATTATTTTTTTATTTAATAATCTAATTAGACGCTCAT
CATATTAGTGAATCAGTTTCTAAGGTAATTTATAGCAGCAACTATGATAATAGTGGCAAC
TCTGCCTAAAAAGATGACGATTATGAACAAAATTTATACAAGAACAAATTCTACTCAGAG
TAATTAATTCTATTCATGATATCTTTTCAGTTTAAAGAAAATTAATTATATAAATTGAAT
ATTTAGATTTTATAAAATGTTTATCATTTTTTATTCTTAAAATTTCAAATATATCTTTTT
TGAAACTTAGCCATTCGGATAATTCTGATGATGAAGACGACGATGATGATGATAGAAGAG
ACAAGAGAAAGAGAAATTGTAAATAAATAAAAATATTTTTTTTTTAAGCTAACTTTTGAT
AATTTGCATAATTAGTTAAGAAAAGACTTAGCATTTAGCAATCTGATATATAAAGCGATA
ACGAAAATAAAAGTTTGAGAAGCGACTCAGAAGGAAGAGAAGGAAATAAAAGGGTTAGCA
GAAAAGATAGCTATGCTAGTAATCATAGTGGGAAGAGAGATTAAAATAAGGATGAAAAAG
ACTCTCATTATAATTCAAAATAAAACTATAACTAGAACAATGGAAAATACCAAAACAATA
AATACAACAATAATAATAGTAGGTTTAAAAATGATAAAAAAAATTTAAATAACAATGGAA
ACAATAAAAGATTAAGTAATGGACCAGCAGCTCCTTTACCAACTTTCATGAGTATGAATA
ATGGAGGAATCATTCCAAATTTACTTACTAATAATCCTATGATGAATTATCCCATGCCTA
ATAGTCTAAATTTAATGCAACCTTTTAGCGGTATATTCAATCCAAGAGTAGGTCCTCCTG
CACCTCCTACAGGAAAACCAGTCATCTCTTAAGCTGGTACTGGTGCTCCTTCTATAACTC
TATCAAAATCTAAAAATATTATTTATGTCTTTTACATACCACCTAAATTGAATAATGTTA
CTAAAATTAGTTAGTATTTCACAAATAAATTTGGAGCTGTTTCAGCTTATGACAAAATTG
ATGAAACCACTGCTTCAATAAAATTTGAAAAAGAAGAATCTGCTTAAAAGGCAGTAGATT
CAAAAGAAAAGCCATTCAGAATAGAATAAATTGTTGTAACTTTTACTAGAAGCCCAGCTC
CTCCCAAACCAGCATTTGTGAACAAAGGCAATAATTAAAACAATAATTAAAATGGTGGAA
AATCCACCTTGCATAGGAAGCCTAGCATCGATGGATCAGAACCTGCCAAATAAAAATTCA
TAAAAAATGAAAACAACAACAGTACCACTTTTAACAACAACAACAACAATAATAATAATA
GCAACATCAACAACTAAAAACCTAAGCTAGCAATTAATTTTGAGCAGAAGAAAAAGCAAA
AGCAATTTGATGAACAAAAAAGATTAATTTAACTAAAATTTGCAGATAAGCTTAAAGTGA
TGATATTCATAAAAAAAAGGGAATAAAATCCTGAAAGCGAAATCCGTTAAGAAGTTCAAA
AATCTATTGATTAAATTAAATAAGTCAAAGATGTACTATCAAAAGTATAAACTCAAGAAG
ATCTTTAATAAGTAGAATAGCATGAATTAATCGTTGAAAATCAATATGAATTTGCTCAAA
AAATACGTTTCTTAGAAGGAAAAGACATGAGTTTGACTGAGTTACGTCCTAAGTTACTTG
TAAAATATGAAAGATGTTATTTTTATTTAAACTTTAATTATTATTGTTTAGGAATATGGA
AAAGTAGAAACTTTGAAGCCTCACATTATGGAAAAAGCTGTTGATATATGTTTTAGCGAT
TTTGAATCATCAGAAAAAGTAAATAGATTAACAAATTTAGACCATTGATAAATAAATTAA
TTAATATTTAATAGATTTTTATTTTTTTGTTATTAATTTTTAGGCATACTTTGGATTACA
AGGACAATATAATATAGAGTTCATTCATTAGCATATTGTTAAATTTTTAAAAAATCCTTT
CTAACCTTAGGATGAAGCTTAAGAAGAATAAGAAGAAGGAGGAAATTAGTTAGATCAAAA
TATTGAATACTAAGAAGATGAATAATAGGGAGATTAAATTTAACAAGATTAAGCAAACGA
AAATTAAGAATAGTAATACCAATACGATGAAAATAATGAGGAATACTATGAAAACTAAGA
ATAAGCTTAGGAGGGAGAAGAATACTAAGAGAATATTGCTGAATAAGATGAATAGCAATA
ATAATACTAAGAATTATAAGATAATTAGCAAATTCAAGAGGAGGACCAATAAGTTGATGA
TGATCTTTGA