Identifiers and Description

Gene Model Identifier

TTHERM_01050580

Standard Name

RRM50 (RNA recognition motif-containing protein 50)

Aliases

PreTt27801 | 212.m00059

Description

RNA recognition motif-containing protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( TIGR01612 ) rhoptry protein
• ( PF00515 ) tetratricopeptide repeat
• ( PF07719 ) tetratricopeptide repeat
• ( TIGR00864 ) polycystin cation channel protein
• ( TIGR01563 ) phage head-tail adaptor, putative
• ( TIGR00741 ) ribosomal subunit interface protein
• ( PF00076 ) RNA recognition motif. (a.k.a. RRM,
• ( TIGR01642 ) U2 snRNP auxilliary factor, large

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10%

TetraMine Data

TTHERM_01050580

WebApollo

Fullscreen View

Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_01463.1	9.997093137033517e-262	hypothetical protein (754 aa)
Oxytricha	Contig655.1.g20	0.000009999254677478949	RNA recognition motif (a_k_a_ RRM, RBD, or RNP domain)

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_01050580(coding)
ATGCAACTAAAGTAGTCTTAAAAGGAGTAGATTAGAAATATCATCAATTCTAAGCTTTCC
AATAGCAAGAGAGGAGATGAAATATCCTCTTAAGTTGAAGATAAGGTCATAGATTTGATT
GAGAGATAGAATTTCTAAAGCAAAGATAGTCTCCAAGATAAATTGTAAGGAGAATTAAAG
GACATTTTAAAAGAAAACGCTCATCATATTAGTGAATCAGTTTCTAAGGTAATTTATAGC
AGCAACTATGATAATAGTGGCAACTCTGCCTAAAAAGATGACGATTATGAACAAAATTTA
TACAAGAACAAATTCTACTCAGACCATTCGGATAATTCTGATGATGAAGACGACGATGAT
GATGATAGAAGAGACAAGAGAAAGAGAAATTTTAAGAAAAGACTTAGCATTTAGCAATCT
GATATATAAAGCGATAACGAAAATAAAAGTTTGAGAAGCGACTCAGAAGGAAGAGAAGGA
AATAAAAGGGTTAGCAGAAAAGATAGCTATGCTAGTAATCATAGTGGGAAGAGAGATTAA
AATAAGGATGAAAAAGACTCTCATTATAATTCAAAATAAAACTATAACTAGAACAATGGA
AAATACCAAAACAATAAATACAACAATAATAATAGTAGGTTTAAAAATGATAAAAAAAAT
TTAAATAACAATGGAAACAATAAAAGATTAAGTAATGGACCAGCAGCTCCTTTACCAACT
TTCATGAGTATGAATAATGGAGGAATCATTCCAAATTTACTTACTAATAATCCTATGATG
AATTATCCCATGCCTAATAGTCTAAATTTAATGCAACCTTTTAGCGGTATATTCAATCCA
AGAGTAGGTCCTCCTGCACCTCCTACAGGAAAACCAGTCATCTCTTAAGCTGGTACTGGT
GCTCCTTCTATAACTCTATCAAAATCTAAAAATATTATTTATGTCTTTTACATACCACCT
AAATTGAATAATGTTACTAAAATTAGTTAGTATTTCACAAATAAATTTGGAGCTGTTTCA
GCTTATGACAAAATTGATGAAACCACTGCTTCAATAAAATTTGAAAAAGAAGAATCTGCT
TAAAAGGCAGTAGATTCAAAAGAAAAGCCATTCAGAATAGAATAAATTGTTGTAACTTTT
ACTAGAAGCCCAGCTCCTCCCAAACCAGCATTTGTGAACAAAGGCAATAATTAAAACAAT
AATTAAAATGGTGGAAAATCCACCTTGCATAGGAAGCCTAGCATCGATGGATCAGAACCT
GCCAAATAAAAATTCATAAAAAATGAAAACAACAACAGTACCACTTTTAACAACAACAAC
AACAATAATAATAATAGCAACATCAACAACTAAAAACCTAAGCTAGCAATTAATTTTGAG
CAGAAGAAAAAGCAAAAGCAATTTGATGAACAAAAAAGATTAATTTAACTAAAATTTGCA
GATAAGCTTAAAGTGATGATATTCATAAAAAAAAGGGAATAAAATCCTGAAAGCGAAATC
CGTTAAGAAGTTCAAAAATCTATTGATTAAATTAAATAAGTCAAAGATGTACTATCAAAA
GTATAAACTCAAGAAGATCTTTAATAAGTAGAATAGCATGAATTAATCGTTGAAAATCAA
TATGAATTTGCTCAAAAAATACGTTTCTTAGAAGGAAAAGACATGAGTTTGACTGAGTTA
CGTCCTAAGTTACTTGAATATGGAAAAGTAGAAACTTTGAAGCCTCACATTATGGAAAAA
GCTGTTGATATATGTTTTAGCGATTTTGAATCATCAGAAAAAGCATACTTTGGATTACAA
GGACAATATAATATAGAGTTCATTCATTAGCATATTGTTAAATTTTTAAAAAATCCTTTC
TAACCTTAGGATGAAGCTTAAGAAGAATAAGAAGAAGGAGGAAATTAGTTAGATCAAAAT
ATTGAATACTAAGAAGATGAATAATAGGGAGATTAAATTTAACAAGATTAAGCAAACGAA
AATTAAGAATAGTAATACCAATACGATGAAAATAATGAGGAATACTATGAAAACTAAGAA
TAAGCTTAGGAGGGAGAAGAATACTAAGAGAATATTGCTGAATAAGATGAATAGCAATAA
TAATACTAAGAATTATAAGATAATTAGCAAATTCAAGAGGAGGACCAATAAGTTGATGAT
GATCTTTGA

>TTHERM_01050580(protein)
MQLKQSQKEQIRNIINSKLSNSKRGDEISSQVEDKVIDLIERQNFQSKDSLQDKLQGELK
DILKENAHHISESVSKVIYSSNYDNSGNSAQKDDDYEQNLYKNKFYSDHSDNSDDEDDDD
DDRRDKRKRNFKKRLSIQQSDIQSDNENKSLRSDSEGREGNKRVSRKDSYASNHSGKRDQ
NKDEKDSHYNSKQNYNQNNGKYQNNKYNNNNSRFKNDKKNLNNNGNNKRLSNGPAAPLPT
FMSMNNGGIIPNLLTNNPMMNYPMPNSLNLMQPFSGIFNPRVGPPAPPTGKPVISQAGTG
APSITLSKSKNIIYVFYIPPKLNNVTKISQYFTNKFGAVSAYDKIDETTASIKFEKEESA
QKAVDSKEKPFRIEQIVVTFTRSPAPPKPAFVNKGNNQNNNQNGGKSTLHRKPSIDGSEP
AKQKFIKNENNNSTTFNNNNNNNNNSNINNQKPKLAINFEQKKKQKQFDEQKRLIQLKFA
DKLKVMIFIKKREQNPESEIRQEVQKSIDQIKQVKDVLSKVQTQEDLQQVEQHELIVENQ
YEFAQKIRFLEGKDMSLTELRPKLLEYGKVETLKPHIMEKAVDICFSDFESSEKAYFGLQ
GQYNIEFIHQHIVKFLKNPFQPQDEAQEEQEEGGNQLDQNIEYQEDEQQGDQIQQDQANE
NQEQQYQYDENNEEYYENQEQAQEGEEYQENIAEQDEQQQQYQELQDNQQIQEEDQQVDD
DL

>TTHERM_01050580(gene)
ATGCAACTAAAGTAGTCTTAAAAGGAGTAGATTAGAAATATCATCAATTCTAAGCTTTCC
AATAGCAAGTATAAAAAATTGTTTTCAAACATTCCTCTAAATTTAGTTTATTATTAAAAA
GGAGAGGAGATGAAATATCCTCTTAAGTTGAAGATAAGGTCATAGATTTGATTGAGAGAT
AGAATTTCTAAAGCAAAGATAGTCTCCAAGATAAATTGTAAGGAGAATTAAAGGACATTT
TAAAAGAAAGTAATAAGAAAAATTTGATTTTTTGAAAAATAAATTGTTTAGCTTGTGAAA
ATTTAATTTTTTACCTGTTTAACATTATTTTTTTATTTAATAATCTAATTAGACGCTCAT
CATATTAGTGAATCAGTTTCTAAGGTAATTTATAGCAGCAACTATGATAATAGTGGCAAC
TCTGCCTAAAAAGATGACGATTATGAACAAAATTTATACAAGAACAAATTCTACTCAGAG
TAATTAATTCTATTCATGATATCTTTTCAGTTTAAAGAAAATTAATTATATAAATTGAAT
ATTTAGATTTTATAAAATGTTTATCATTTTTTATTCTTAAAATTTCAAATATATCTTTTT
TGAAACTTAGCCATTCGGATAATTCTGATGATGAAGACGACGATGATGATGATAGAAGAG
ACAAGAGAAAGAGAAATTGTAAATAAATAAAAATATTTTTTTTTTAAGCTAACTTTTGAT
AATTTGCATAATTAGTTAAGAAAAGACTTAGCATTTAGCAATCTGATATATAAAGCGATA
ACGAAAATAAAAGTTTGAGAAGCGACTCAGAAGGAAGAGAAGGAAATAAAAGGGTTAGCA
GAAAAGATAGCTATGCTAGTAATCATAGTGGGAAGAGAGATTAAAATAAGGATGAAAAAG
ACTCTCATTATAATTCAAAATAAAACTATAACTAGAACAATGGAAAATACCAAAACAATA
AATACAACAATAATAATAGTAGGTTTAAAAATGATAAAAAAAATTTAAATAACAATGGAA
ACAATAAAAGATTAAGTAATGGACCAGCAGCTCCTTTACCAACTTTCATGAGTATGAATA
ATGGAGGAATCATTCCAAATTTACTTACTAATAATCCTATGATGAATTATCCCATGCCTA
ATAGTCTAAATTTAATGCAACCTTTTAGCGGTATATTCAATCCAAGAGTAGGTCCTCCTG
CACCTCCTACAGGAAAACCAGTCATCTCTTAAGCTGGTACTGGTGCTCCTTCTATAACTC
TATCAAAATCTAAAAATATTATTTATGTCTTTTACATACCACCTAAATTGAATAATGTTA
CTAAAATTAGTTAGTATTTCACAAATAAATTTGGAGCTGTTTCAGCTTATGACAAAATTG
ATGAAACCACTGCTTCAATAAAATTTGAAAAAGAAGAATCTGCTTAAAAGGCAGTAGATT
CAAAAGAAAAGCCATTCAGAATAGAATAAATTGTTGTAACTTTTACTAGAAGCCCAGCTC
CTCCCAAACCAGCATTTGTGAACAAAGGCAATAATTAAAACAATAATTAAAATGGTGGAA
AATCCACCTTGCATAGGAAGCCTAGCATCGATGGATCAGAACCTGCCAAATAAAAATTCA
TAAAAAATGAAAACAACAACAGTACCACTTTTAACAACAACAACAACAATAATAATAATA
GCAACATCAACAACTAAAAACCTAAGCTAGCAATTAATTTTGAGCAGAAGAAAAAGCAAA
AGCAATTTGATGAACAAAAAAGATTAATTTAACTAAAATTTGCAGATAAGCTTAAAGTGA
TGATATTCATAAAAAAAAGGGAATAAAATCCTGAAAGCGAAATCCGTTAAGAAGTTCAAA
AATCTATTGATTAAATTAAATAAGTCAAAGATGTACTATCAAAAGTATAAACTCAAGAAG
ATCTTTAATAAGTAGAATAGCATGAATTAATCGTTGAAAATCAATATGAATTTGCTCAAA
AAATACGTTTCTTAGAAGGAAAAGACATGAGTTTGACTGAGTTACGTCCTAAGTTACTTG
TAAAATATGAAAGATGTTATTTTTATTTAAACTTTAATTATTATTGTTTAGGAATATGGA
AAAGTAGAAACTTTGAAGCCTCACATTATGGAAAAAGCTGTTGATATATGTTTTAGCGAT
TTTGAATCATCAGAAAAAGTAAATAGATTAACAAATTTAGACCATTGATAAATAAATTAA
TTAATATTTAATAGATTTTTATTTTTTTGTTATTAATTTTTAGGCATACTTTGGATTACA
AGGACAATATAATATAGAGTTCATTCATTAGCATATTGTTAAATTTTTAAAAAATCCTTT
CTAACCTTAGGATGAAGCTTAAGAAGAATAAGAAGAAGGAGGAAATTAGTTAGATCAAAA
TATTGAATACTAAGAAGATGAATAATAGGGAGATTAAATTTAACAAGATTAAGCAAACGA
AAATTAAGAATAGTAATACCAATACGATGAAAATAATGAGGAATACTATGAAAACTAAGA
ATAAGCTTAGGAGGGAGAAGAATACTAAGAGAATATTGCTGAATAAGATGAATAGCAATA
ATAATACTAAGAATTATAAGATAATTAGCAAATTCAAGAGGAGGACCAATAAGTTGATGA
TGATCTTTGA