Identifiers and Description
Gene Model Identifier
TTHERM_00756450Standard Name
RRM48 (RNA recognition motif-containing protein 48)Aliases
PreTt18308 | 123.m00127 | 3742.m00057Description
RRM48 RNA-binding protein 42 (RBM42)-like RNA recognition motif proteinGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
No Data fetched for Gene Ontology Annotations
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 13.7%
TetraMine Data
TTHERM_00756450
WebApollo
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Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_15406.1 9.997093137033517e-262 RNA binding protein (445 aa)
Oxytricha Contig7157.0.g23 9.999888128184441e-42 RNA recognition motif_ (a_k_a_
RRM, RBD, or RNP domain)
DictyBase DDB_G0289941 2.9998215087698487e-30 DDB_G0289941 on chromosome: 5
position 3478416 to 3479861
SGD YOL041C 7.003307964816097e-28 NOP12 Nucleolar protein involv
ed in pre-25S rRNA processing
and biogenesis of large 60S ri
bosomal subunit; contains an R
NA recognition motif (RRM); bi
nds to Ebp2; similar to Nop13p
and Nsr1p
WormBase WBGene00008688 1.999790113608142e-24 status:Confirmed UniProt:Q95
QL3 protein_id:CAC70081.1
Stentor Coeruleus SteCoe_26182 2.6102790696677047e-23
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00756450(coding)
ATGAGCGGAACTTTAGGATATTTATTATAGCAAAGTGCTTAAAATCAAGGAAAAAAATCC
AATGAAAAGACAAACAGCAAGGCTGTTTCAGAAGTTGCCGATTTATTTTCTAAGGAAAAG
ACTGTTTTAGCTGAACCAGTTATTGTAGAAGCTATCATTAATCCTGAAAATGAAGAAAAT
GAGGAAAATAATCCTTTCATTGATGAAAATATGACTGCAAAATAGAAAAAAGAAAAGGAT
GATAGAACTGTTTTTGTTGGTAACATCTCCTTAGAAGCTACTGGTAGTTAAATTGCTAAA
GAGTTTAAACAATACGGAAAAATTGAAAAGATTTGGATTAGATCAGTCCCAGTTGAAAAC
TCAAAAATGCCTAAAAGAGCTAGTGTTATCCTCAAAAAGTTTAAGGATGGTGCTGATAGA
AAGAATGCTTACATTCTATTTTCTACATAAGAAGAAGCTGAAAAGTCACTTGAAGCTAAT
GGAAAGGTATTTTTGGAAAAGCACTTGAGAGTAGATAAAGCAAATGAAAAAATATTGGAT
TACACCAGAACTATATTTGTTGGTAACTTGCACTTTAAGATTTCTGAAGAATAGCTTAGA
CATCATTTTGAAAGCTGTGGTGATATCTTGAACGTAAGAGTTATCAGAGATCCTAAAACT
CATGAAGGAAAAGGATTTGGTTATGTTTTCTTTAAGGAAAAGACTGGATTCTAAAATGCT
TTAGAAAAAAATGGAACTAAACTCCTTGAAAGAGAAATTAGAGTTAAAAAAGCCGTCCCT
GCAGAGAGACTTGAAAAGAAAAAAGTTAGAAAAGCTGAAAAGGCTAACATTATAAATAAG
GAACATGCTATTTAAAGATTAAAAAGTAAATTGAAAGGTAAAGCCGTTGTTCATGACCAA
GATGATTCCGATGATGAGTAAGAATAGCCTAAGGTTAAAAAAGTAAAGAAGGGTATTCAA
AAAAACGACACTATTCCTACAAAGAACTTTGAAAAGAATATGAAGACAACTAACTTTAAA
GAAAACGAAAATGAAATTTTCGACTTTAAAAATGAAATGTCTATTGCTCCTAGAGTCTTG
AGAAAGAAAATTAAAAAACTTAGCAAAAAGGGAATTGAATCAACTGAAGCTTTTTCAAAG
GTTTAGCAACTTAAGAAAAATAAAAAGATTAGCAACGATAAAAATATCTTTAATTCTAAA
TTCACTCTTTAAGCTAGAAAAGATAAAAGATTCAAAAAAGCCATGCAAAATAAGAAAAAA
GGTAAATTAGAAGTAAAGAAAGAAGATAGAAAAGACAAAAAGAAAAAAACAACAACAGCA
GCAGCCTCCACAGCTAAGAAATAAACTAATTAATGA>TTHERM_00756450(protein)
MSGTLGYLLQQSAQNQGKKSNEKTNSKAVSEVADLFSKEKTVLAEPVIVEAIINPENEEN
EENNPFIDENMTAKQKKEKDDRTVFVGNISLEATGSQIAKEFKQYGKIEKIWIRSVPVEN
SKMPKRASVILKKFKDGADRKNAYILFSTQEEAEKSLEANGKVFLEKHLRVDKANEKILD
YTRTIFVGNLHFKISEEQLRHHFESCGDILNVRVIRDPKTHEGKGFGYVFFKEKTGFQNA
LEKNGTKLLEREIRVKKAVPAERLEKKKVRKAEKANIINKEHAIQRLKSKLKGKAVVHDQ
DDSDDEQEQPKVKKVKKGIQKNDTIPTKNFEKNMKTTNFKENENEIFDFKNEMSIAPRVL
RKKIKKLSKKGIESTEAFSKVQQLKKNKKISNDKNIFNSKFTLQARKDKRFKKAMQNKKK
GKLEVKKEDRKDKKKKTTTAAASTAKKQTNQ>TTHERM_00756450(gene)
ATGAGCGGAACTTTAGGATATTTATTATAGCAAAGTGCTTAAAATCAAGGAAAAAAATCC
AATGAAAAGACAAACAGCAAGGCTGTTTCAGAAGTTGCCGATTTATTTTCTAAGGAAAAG
ACTGTTTTAGCTGAACCAGTTATTGTAGAAGCTATCATTAATCCTGAAAATGTAATTATT
TTGATACTCCTACAATTAAATAAAATCAATTTAAAAATCTAAATTATTCTGTTTTTTTAT
TTAGGAAGAAAATGAGGAAAATAATCCTTTCATTGATGAAAATATGACTGCAAAATAGAA
AAAAGAAAAGGATGATAGAACTGTTTTTGTTGGTAACATCTCCTTAGAAGCTACTGGTAG
TTAAATTGCTAAAGAGTTTAAACAATACGGAAAAGTAAAATAAAAATATGAAATTACAAT
ATATAAAAAAATTATTTTTTAATAGATTGAAAAGATTTGGATTAGATCAGTCCCAGTTGA
AAACTCAAAAATGCCTAAAAGAGCTAGTGTTATCCTCAAAAAGGTAATTTATAAAATAGC
AAATTAAAAATTATTTTAGGCGTATTCAACTTACTATTTACAAATTCTTAAAAGTTTAAG
GATGGTGCTGATAGAAAGAATGCTTACATTCTATTTTCTACATAAGAAGAAGCTGAAAAG
TCACTTGAAGCTAATGGAAAGGTATTTTTGGAAAAGCACTTGAGAGTAGATAAAGCAAAT
GAAAAAATAGTAAATAGATATAATACTTATTAATAGCAATATAAATAATATTATAATTAT
TAAAATACAAGTTGGATTACACCAGAACTATATTTGTTGGTAACTTGCACTTTAAGATTT
CTGAAGAATAGCTTAGACATCATTTTGAAAGCTGTGGTGATATCTTGAACGTAAGAGTTA
TCAGAGATCCTAAAACTCATGAAGGAAAAGGATTTGGTTATGTTTTCTTTAAGGAAAAGA
CTGGATTCTAAAATGCTTTAGAAAAAAATGGAACTAAACTCCTTGAAAGAGAAATTAGAG
TTAAAAAAGCCGTCCCTGCAGAGAGACTTGAAAAGAAAAAAGTTAGAAAAGCTGAAAAGG
CTAACATTATAAATAAGGAACATGCTATTTAAAGATTAAAAAGTAAATTGAAAGGTAAAG
CCGTTGTTCATGACCAAGATGATTCCGATGATGAGTAAGAATAGCCTAAGGTTAAAAAAG
TAAAGAAGGGTATTCAAAAAAACGACACTATTCCTACAAAGAACTTTGAAAAGAATATGA
AGACAACTAACTTTAAAGAAAACGAAAATGAAGTACTTACTAAATTTAATTTATTGCCAA
GTATAATACAAATAAAAAATTATAAAAAAATAGATTTTCGACTTTAAAAATGAAATGTCT
ATTGCTCCTAGAGTCTTGAGAAAGAAAATTAAAAAACTTAGCAAAAAGGTATTATAAATA
TTGAATTTTAAATTGAGAAAATTAATTTTTATTTATAATAAATTAGGGAATTGAATCAAC
TGAAGCTTTTTCAAAGGTTTAGCAACTTAAGAAAAATAAAAAGATTAGCAACGATAAAAA
TATCTTTAATTCTAAATTCACTCTTTAAGCTAGAAAAGTAATTAATTCGCTTAAATTTTT
ATTGATAAATATAATAATAATATTTTACTCGTAATTTAAAACAGGATAAAAGATTCAAAA
AAGCCATGCAAAATAAGAAAAAAGGTAAATTAGAAGTAAAGAAAGAAGATAGAAAAGACA
AAAAGAAAAAAACAACAACAGCAGCAGCCTCCACAGCTAAGAAATAAACTAATTAATGA