Identifiers and Description
Gene Model Identifier
TTHERM_00658750Standard Name
RRM41 (RNA recognition motif-containing protein 41)Aliases
PreTt02160 | 97.m00146 | 3724.m00053Description
RRM41 RNA recognition motif proteinGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Molecular Function
- nucleic acid binding (IEA) | GO:0003676
- zinc ion binding (IEA) | GO:0008270
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.4%
TetraMine Data
TTHERM_00658750
WebApollo
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Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_16217.1 5.9995201161793426e-102 RNA binding protein (316 aa)
Oxytricha Contig1956.0.g14 0.00000019998969434520019 RNA recognition motif_ (a_k_a_
RRM, RBD, or RNP domain)
WormBase WBGene00003902 0.0000029996948234116693 locus:pab-1 status:Confirmed
UniProt:Q9U302 protein_id
:CAA21572.1
DictyBase DDB_G0283687 0.000004000864880866421 DDB_G0283687 on chromosome: 4
position 982205 to 984735
SGD YER165W 0.000004000864880866421 PAB1 Poly(A) binding protein,
part of the 3-end RNA-processi
ng complex, mediates interacti
ons between the 5 cap structur
e and the 3 mRNA poly(A) tail,
involved in control of poly(A
) tail length, interacts with
translation factor eIF-4G
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00658750(coding)
ATGTCATTCTCTATTAAAAGTAATTAGATTGATAAATAGATAGATAGACAGAAAAGCAGA
TCAAACAAAGTGATATATATTTATAAAACTATTAATCAAAGAAAGGAAAGTCATAAAAAA
AATAATAATAAATTAGAAGAAATAAATAAATAAATTTTGAAAAAATAATAATTGCATTAA
ATTTAAAAAATGTCTCGCCCATAAACAAAGCTTTATGTTGCCAAATTCGGTAACAACGTA
GGTAGAAAAGAAATCGAAGAAACTTTTGGTAAGTATGGTGATATCTATAGTTGCAAAGTA
AATGACCGTGAAGGTTATGCAACTGTATCTTACAAATATTAAGATTAAGCTGATAAAGCT
ATTTCAAAACTTAATGGATCTGATGTTTTAGGTGGAAGTTTATTGGTAGAACATACTCTC
AAGAAGAGCAGAGATGATGACCATAGCAGATATCCCAGAGACAGCAGATATGGTAACAGC
AGTTATAGAGATCAAAATGGATACAGAGGAGGTCCTTAAAGCTCTTCTCGTTATGGTGGA
GATCGTGGTCGCAGTAGTGGAGATAGAGATAGCTACAGAAGAGGAACTAGTGGACCACCT
AGAACTGATAAAGAAAAATATATGAAGGAAGGTTTATGCTTCACCTGCAAGGGATAAGGT
CATATCTCTAAAAATTGTCCTGAAGCTAGAAACGGTGGAAGTGGAAGAGACAGAAGAGAC
TCTAGAGGCGGAAGAGTTAATGGATTTAGACCTGATAGAGAAAGAAGACCTTATAGAGAA
AGAAGTAGAAGTAATGATAGAAGCAAGGGCAAGAGCAGAAGAGACAATAGCAGAAGCAGA
AGCCCTCATGATAAGTATGCTGACAAGGATAGAAAGAGAAGATCAAGAAAGCACTCTAGA
AAGAGCAGTTCTTCTAGCAGCCACTCAGGAAGATCTAATTCTAGAAAGGACAGAAAGAGA
TCTGAATCTTCCTCTTCTCAATCCTCTAGATCAAATTCTAATTCTAGCCGCTCTAATTCA
GCAAGCGTTAATAAGTAATAAAATGGAGATATGAAAATGAACGGCAACATGAATGACTAA
ATTAAAGATATGAATGTTTCTCAATGA>TTHERM_00658750(protein)
MSFSIKSNQIDKQIDRQKSRSNKVIYIYKTINQRKESHKKNNNKLEEINKQILKKQQLHQ
IQKMSRPQTKLYVAKFGNNVGRKEIEETFGKYGDIYSCKVNDREGYATVSYKYQDQADKA
ISKLNGSDVLGGSLLVEHTLKKSRDDDHSRYPRDSRYGNSSYRDQNGYRGGPQSSSRYGG
DRGRSSGDRDSYRRGTSGPPRTDKEKYMKEGLCFTCKGQGHISKNCPEARNGGSGRDRRD
SRGGRVNGFRPDRERRPYRERSRSNDRSKGKSRRDNSRSRSPHDKYADKDRKRRSRKHSR
KSSSSSSHSGRSNSRKDRKRSESSSSQSSRSNSNSSRSNSASVNKQQNGDMKMNGNMNDQ
IKDMNVSQ>TTHERM_00658750(gene)
ATGTCATTCTCTATTAAAAGTAATTAGATTGATAAATAGATAGATAGACAGAAAAGCAGA
TCAAACAAAGTGATATATATTTATAAAACTATTAATCAAAGAAAGGAAAGTCATAAAAAA
AATAATAATAAATTAGAAGAAATAAATAAATAAATTTTGAAAAAATAATAATTGCATTAA
ATTTAAAAAATGTCTCGCCCATAAACAAAGCTTTATGTTGCCAAATTCGGTAACAACGTA
GGTAGAAAAGAAATCGAAGAAACTTTTGGTAAGTATGGTGATATCTATAGTTGCAAAGTA
AATGACCGTGAAGGTTATGCAACTGTATCTTACAAATATTAAGATTAAGCTGATAAAGCT
ATTTCAAAACTTAATGGATCTGATGTTTTAGGTGGAAGTTTATTGGTAGAACATACTCTC
AAGAAGAGCAGAGATGATGACCATAGCAGATATCCCAGAGACAGCAGATATGGTAACAGC
AGTTATAGAGATCAAAATGGATACAGAGGAGGTCCTTAAAGCTCTTCTCGTTATGGTGGA
GATCGTGGTCGCAGTAGTGGAGATAGAGATAGCTACAGAAGAGGAACTAGTGGACCACCT
AGAACTGATAAAGAAAAATATATGAAGGAAGGTTTATGCTTCACCTGCAAGGGATAAGGT
CATATCTCTAAAAATTGTCCTGAAGCTAGAAACGGTGGAAGTGGAAGAGACAGAAGAGAC
TCTAGAGGCGGAAGAGTTAATGGTAAATATTTGATATAATCAATCATATATGTTTAATAA
ATAAAATCCTCTTAACTCCTTTAGAATATTTAGTTTTATTTGATAAAAAAATGAATAAAT
ATAATTTTAAAATGAATTATTTAACATTTTCGAATGCTAAATATTTAAGGAATCATAGAT
TTTGAAAATTTATTTGGTTTATTGGTCTTGCGTTTAAACAAATCTCATTAAAATTTAAAA
ATGAGTTTTTTTGTTTTTTAAATTCTTAACTCCTTAGGACTGAAATTGATTGATTAATTT
ATTTAATTTTCTGCTTTTCTTCTATTATATTAGCTTAATTTGTTGTGAAAAAGGACAATA
GATAGATAATTAGATAGTTAGCTAAAAATTCTTTTTAAATTAATCTCAAACTTCCTTTTA
TATTAAATAATCTAATTAATTAATTAATATTCACTGATGTGTCTAATTAGTTAATTAATT
TCAGAGAAATAAAGCACCACCAAAATACAACTTAAGCCACTTTTTTTTATTTTTTGAATA
TTGCTCCAAAAGCATAAAAATTTAAATTAGAATATAATCACACATACATACATAGTCATT
TACTTATATTTAGAAACAATTTTATATAAATAATAGGATTTAGACCTGATAGAGAAAGAA
GACCTTATAGAGAAAGAAGTAGAAGTAATGATAGAAGCAAGGGCAAGAGCAGAAGAGACA
ATAGCAGAAGCAGAAGCCCTCATGATAAGTATGCTGACAAGGATAGAAAGAGAAGATCAA
GAAAGCACTCTAGAAAGAGCAGTTCTTCTAGCAGCCACTCAGGAAGATCTAATTCTAGAA
AGGACAGAAAGAGATCTGAATCTTCCTCTTCTCAATCCTCTAGATCAAATTCTAATTCTA
GCCGCTCTAATTCAGCAAGCGTTAATAAGTAATAAAATGGAGATATGAAAATGAACGGCA
ACATGAATGACTAAATTAAAGATATGAATGTTTCTCAATGA