Identifiers and Description
Gene Model Identifier
TTHERM_00657460Standard Name
RRM40 (RNA recognition motif-containing protein 40)Aliases
PreTt02130 | 97.m00116 | 3724.m00024Description
RRM40 RNA recognition motif 2 in vertebrate RNA-binding proteinGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
No Data fetched for Gene Ontology Annotations
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.5%
TetraMine Data
TTHERM_00657460
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_16245.1 9.997093137033517e-262 RNA binding domain-containing
protein (695 aa)
Oxytricha Contig14672.0.g47 1.9991939848149086e-44 RNA recognition motif_ (a_k_a_
RRM, RBD, or RNP domain)
WormBase WBGene00011043 2.9990874792167046e-33 locus:rbm-28 status:Partiall
y_confirmed UniProt:O62325
protein_id:CAB05579.2
Stentor Coeruleus SteCoe_16384 7.095474162284704e-23 DictyBase DDB_G0270156 1.9994498063102785e-22 DDB_G0270156 on chromosome: 1
position 4329080 to 4331994
SGD YPL043W 1.000116773704384e-19 NOP4 Nucleolar protein, essent
ial for processing and maturat
ion of 27S pre-rRNA and large
ribosomal subunit biogenesis;
constituent of 66S pre-ribosom
al particles; contains four RN
A recognition motifs (RRMs)
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00657460(coding)
ATGACTGACAAAAGTAAGAAAGTAGTTGAAAAACAAGAACAAGAAAACGATTAAGATAAG
AATTAAGCCCAATAAAAGAAGGGTAGAGTTATTATTAGAAATTTAATATTTGATATCAGT
GAGAAGCATCTTAAAGGTTTGTTGGGTAAGTATGGTGAAATTATTGAAATTAATATTCCA
GTCAACCCTTCAACAAACAAATCTAAGGGTTTTGCCTTTGTCTAATTTGCTAATAAAAAC
TGTGCATTGAAAGCTATAAATGAGTTAAATGGTACTTAATGGAAGGGTAGAAATATCGTT
TTAGATTTAGCTGTTTCCAAAGAAGAATTCAAAAACCATCAATAGCCATAAAATTAACAA
GATAAATAGTAATCTAAACAAAAAGCTAAAAAATCTGAATAAATTGAAGAGGAAGAAGGA
GATGACGATGAAAAAAAAATGGATGAAGAAGAAGAAAGTGAAGATGATGAAGATCAAGAA
GACGATGATGAAGAGGATGAAGACGAAGATGATGATGAAGAAGAGGAAGACGAAGATGAT
GATAAAAATAATTAAAATAAAAAGGGAAAGAATTAATAAGGATAAAAGAAATTATTTGAA
AATGAAGATTTATCCAAAACATGTTTTGTTAGAAATTTATCTTATGATTCTACTGATAAG
GATTTAAGAACCTTCTGCCAAAACTTTGGTAAAGTAGAAATGGCAAAGGTATGTATGAAT
CATGAAACAGGAAGCAACAAAGGTACTGGTTTTGTAAAATTCTAAGATGCATAAGTAGCT
CTTAAACTTATTGCAAAGAGTAATGAACTCAGTGAAAACTGTCTTTAACAAAAAAATAAA
AAAAATGCCAGCAACATTCATGATATATTTTCAGGAATAAGCGAACTTGATCTTGAAATG
AATGGAAGAAGAATAATTTTCTTGGAAGCTAAGAAAAGAGAAGAAGTTTCTAAAGTTATG
GAAGAGAAGCTTGAAAGAAATTCAATCACTTTAGATAAAGTTAAAACTTTAGATTAATTA
GAAAAGTTTGACAGATAAGGAAAGAGAAACGTTCATTTAGCCAAGCTAGGTATTTTCGAA
GAAGAAAAAAGCATGACTAATGAAGAAAAGGAAAAGAGACGTATTCACTTATAAGAAAAA
TTGAATAAGCTAAAAAACCCTAACAACTATGTATCCTCAACAAGAATTGCCCTTATGAAC
ATACCAAAAGACGAATTCTAAGAAGAAGATATTAGACTTTATGCTCAAGCAGCACTTATA
AAAGAACATGGTCAAGAATATTTTAAAAAATAAAATCCAATTAAATAGGTCTTATTGCTT
AGAGATAAGAATAAACTTGATAAGGATGGAGTACCTAAAAGCAGAGGTATTGGATTCATA
GAATTTAATACACATGAATAAGCACTTTCATTCTTGGAATATTGTGTAAATGATAAGCAA
AACTTTGAAAAGAAATACAAGAAAACACCTATTATTGAGTTTTCAATTGAAGATGCTAGA
AAAATGGCAAAAAAGAATAAATTATTAGAAAAAGTTAAATAAAAATAAGCAGAAAAGAAG
AAAGAAAAGAAAGAATTAACTGAAGAGGAATTAGAATCAAAGAAAAAAATTCTTAAAAAT
ACGAACGAAGCAGCAAAAATAAAGATTTAAAATATTCTTGATTAATCTAACTGCAGTGAC
ATGTCTCTTTATGAGGAAGGCAAGAAATTGTTGAAGGACATAAAGAGTAGAGGTATTAAA
TAAAGAATGGCCAAGCTACTAAGAAAGAAGTTCAATATTCAAAATGAAGATAATCAAAAG
TCTAATAAATTAGTAGAAGCTATTTCCAAACAAGAGGAAAAGATCAAAAATAAGAATTCT
AAGGAAGAAAAGAGAAAGCAATTATTGAAGTAGAAAGTATAAGAAGAAAAGAAGTAGAAA
GTAGCTGAATAAAAGAAGAAGCAAAAGGAAATCGATGATGAGCTTGATGTTGATGCATCT
GAACTTATTAAGGCTGTCTCTAAAGAATTAAAGAAAAATAAAATAAGAAGATAAAACTTG
GAAGACTACGATGAATTAGATGATGTAGTTGAAAAGCATATGTAAAAGAAAGTTAAAAAA
ATAAAGCAAGAAAGTAGTGCATTGTGA>TTHERM_00657460(protein)
MTDKSKKVVEKQEQENDQDKNQAQQKKGRVIIRNLIFDISEKHLKGLLGKYGEIIEINIP
VNPSTNKSKGFAFVQFANKNCALKAINELNGTQWKGRNIVLDLAVSKEEFKNHQQPQNQQ
DKQQSKQKAKKSEQIEEEEGDDDEKKMDEEEESEDDEDQEDDDEEDEDEDDDEEEEDEDD
DKNNQNKKGKNQQGQKKLFENEDLSKTCFVRNLSYDSTDKDLRTFCQNFGKVEMAKVCMN
HETGSNKGTGFVKFQDAQVALKLIAKSNELSENCLQQKNKKNASNIHDIFSGISELDLEM
NGRRIIFLEAKKREEVSKVMEEKLERNSITLDKVKTLDQLEKFDRQGKRNVHLAKLGIFE
EEKSMTNEEKEKRRIHLQEKLNKLKNPNNYVSSTRIALMNIPKDEFQEEDIRLYAQAALI
KEHGQEYFKKQNPIKQVLLLRDKNKLDKDGVPKSRGIGFIEFNTHEQALSFLEYCVNDKQ
NFEKKYKKTPIIEFSIEDARKMAKKNKLLEKVKQKQAEKKKEKKELTEEELESKKKILKN
TNEAAKIKIQNILDQSNCSDMSLYEEGKKLLKDIKSRGIKQRMAKLLRKKFNIQNEDNQK
SNKLVEAISKQEEKIKNKNSKEEKRKQLLKQKVQEEKKQKVAEQKKKQKEIDDELDVDAS
ELIKAVSKELKKNKIRRQNLEDYDELDDVVEKHMQKKVKKIKQESSAL>TTHERM_00657460(gene)
ATGACTGACAAAAGTAAGAAAGTAGTTGAAAAACAAGAACAAGAAAACGATTAAGATAAG
AATTAAGCCCGTATAAAATTATTTTACTTACTAGTAGATATATGACTTAATATTATTATT
TTATAAATCAGAATAAAAGAAGGGTAGAGTTATTATTAGAAATTTAATATTTGATATCAG
TGAGAAGCATCTTAAAGGTTTGTTGGGTAAGTATGGTGAAATTATTGAAATTAATATTCC
AGTCAACCCTTCAACAAACAAATCTAAGGGTTTTGCCTTTGTCTAATTTGCTAATAAAAA
CTGTGCATTGAAAGCTATAAATGTATTTATTTGACTTTAGCTTATAAAGTAGAATTTAGA
TTATTGATTAATCAATTTTAAATTAATTAAAAGGAGTTAAATGGTACTTAATGGAAGGGT
AGAAATATCGTTTTAGATTTAGCTGTTTCCAAAGAAGAATTCAAAAACCATCAATAGCCA
TAAAATTAACAAGATAAATAGTAATCTAAACAAAAAGCTAAAAAATCTGAATAAATTGAA
GAGGAAGAAGGAGATGACGATGAAAAAAAAATGGATGAAGAAGAAGAAAGTGAAGATGAT
GAAGATCAAGAAGACGATGATGAAGAGGATGAAGACGAAGATGATGATGAAGAAGAGGAA
GACGAAGATGATGATAAAAATAATTAAAATAAAAAGGGAAAGAATTAATAAGGATAAAAG
AAATTATTTGAAAATGAAGATTTATCCAAAACATGTTTTGTTAGAAATTTATCTTATGAT
TCTACTGATAAGGATTTAAGAACCTTCTGCCAAAACTTTGGTAAAGTAGAAATGGCAAAG
GTAACTAAATAAAGTATTATGTTGGTTCTAAAGTTTAATTTAATAAAATGATATTAGGTA
TGTATGAATCATGAAACAGGAAGCAACAAAGGTACTGGTTTTGTAAAATTCTAAGATGCA
TAAGTAGCTCTTAAACTTATTGCAAAGAGTAATGAACTCAGTGAAAACTGTCTTTAACAA
AAAAATAAAAAAAATGCCAGCAACATTCATGATATATTTTCAGGTATGTGCTATTTATTA
TTTTAATATTGTTTATTTATTTAAAAATTTAAATATTCATTTTGTTAATAGGAATAAGCG
AACTTGATCTTGAAATGAATGGAAGAAGAATAATTTTCTTGGAAGCTAAGAAAAGAGAAG
AAGTTTCTAAAGTTATGGAAGAGAAGCTTGAAAGAAATTCAATCACTTTAGATAAAGTTA
AAACTTTAGATTAATTAGAAAAGTTTGACAGATAAGGAAAGAGAAACGTTCATTTAGCCA
AGCTAGGTATTTTCGAAGAAGAAAAAAGCATGACTAATGAAGAAAAGGAAAAGAGACGTA
TTCACTTATAAGAAAAATTGAATAAGCTAAAAAACCCTAACAACTATGTATCCTCAACAA
GTATACTAACATTTATATTTTTATCACTTTGATATTAAAAATATTTTTAATTTCCAAAGG
AATTGCCCTTATGAACATACCAAAAGACGAATTCTAAGAAGAAGATATTAGACTTTATGC
TCAAGCAGCACTTATAAAAGAACATGGTCAAGAATATTTTAAAAAATAAAATCCAATTAA
ATAGGTAACAACAATAATTGCTTTTTAATTTTTGATTTAAAATTTTTTTAATTATATATA
TTAAGGTCTTATTGCTTAGAGATAAGAATAAACTTGATAAGGATGGAGTACCTAAAAGCA
GAGGTATTGGATTCATAGAATTTAATACACATGAATAAGCACTTTCATTCTTGGAATATT
GTGTAAATGATAAGCAAAACTTTGAAAAGAAATACAAGAAAACACCTATTATTGAGTTTT
CAATTGAAGATGCTAGAAAAATGGCAAAAAAGAATAAATTATTAGAAAAAGTTAAATAAA
AATAAGCAGAAAAGAAGAAAGAAAAGAAAGAATTAACTGAAGAGGAATTAGAATCAAAGA
AAAAAATTCTTAAAAATACGAACGAAGCAGCAAAAATAAAGATTTAAAATATTCTTGATT
AATCTAACTGCAGTGACATGTCTCTTTATGAGGAAGGCAAGAAATTGTTGAAGGACATAA
AGAGTAGAGGTATTAAATAAAGAATGGCCAAGCTACTAAGAAAGAAGTTCAATATTCAAA
ATGAAGATAATCAAAAGTCTAATAAATTAGTAGAAGCTATTTCCAAACAAGAGGAAAAGA
TCAAAAATAAGAATTCTAAGGAAGAAAAGAGAAAGCAATTATTGAAGTAGAAAGTATAAG
AAGAAAAGAAGTAGAAAGTAGCTGAATAAAAGAAGAAGCAAAAGGAAATCGATGATGAGC
TTGATGTTGATGCATCTGAACTTATTAAGGTAAATAATTAAACATTTTACTTAAGAATAT
TTATTGATTAATTTTAATTATTGTTTTATTAAAGGCTGTCTCTAAAGAATTAAAGAAAAA
TAAAATAAGAAGATAAAACTTGGAAGACTACGATGAATTAGATGTAAATTTTTAATAAAT
TTATTATTTTTTAAAATTATTTAATGTTAATAGGATGTAGTTGAAAAGCATATGTAAAAG
AAAGTTAAAAAAATAAAGCAAGAAAGTAGTGCATTGTGA